RNA–Protein interactions for RNA: ENST00000429280.1

SKP1P3-201, Transcript of S-phase kinase associated protein 1 pseudogene 3, humanhuman

BASIC

Gene SKP1P3, Length 487 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P3-201ENST00000429280 RASEFQ8IZ41 740 aa10.05□□□□□ -0.8
SKP1P3-201ENST00000429280 RNF25Q96BH1 459 aaPredicted RBP10.04□□□□□ -0.8
SKP1P3-201ENST00000429280 CHRM1P11229 460 aaPredicted RBP10.02□□□□□ -0.81
SKP1P3-201ENST00000429280 CFAP44Q96MT7 982 aa10.02□□□□□ -0.81
SKP1P3-201ENST00000429280 TAOK2Q9UL54 1235 aa10.02□□□□□ -0.81
SKP1P3-201ENST00000429280 CHADLQ6NUI6 762 aa10.01□□□□□ -0.81
SKP1P3-201ENST00000429280 RIOK3O14730 519 aaKnown RBP10□□□□□ -0.81
SKP1P3-201ENST00000429280 HS6ST3Q8IZP7 471 aa10□□□□□ -0.81
SKP1P3-201ENST00000429280 SPRYD3Q8NCJ5 442 aa10□□□□□ -0.81
SKP1P3-201ENST00000429280 VSIG10Q8N0Z9 540 aa9.99□□□□□ -0.81
SKP1P3-201ENST00000429280 DNAJC5Q9H3Z4 198 aa9.96□□□□□ -0.82
SKP1P3-201ENST00000429280 FARP1Q9Y4F1 1045 aaPredicted RBP9.96□□□□□ -0.82
SKP1P3-201ENST00000429280 VGFO15240 615 aaPredicted RBP9.94□□□□□ -0.82
SKP1P3-201ENST00000429280 PYGBP11216 843 aa9.94□□□□□ -0.82
SKP1P3-201ENST00000429280 PRKAR2AP13861 404 aaKnown RBP9.93□□□□□ -0.82
SKP1P3-201ENST00000429280 FXR2P51116 673 aaKnown RBP eCLIP9.93□□□□□ -0.82
SKP1P3-201ENST00000429280 SGIP1Q9BQI5 828 aa9.91□□□□□ -0.82
SKP1P3-201ENST00000429280 TSPYL2Q9H2G4 693 aaPredicted RBP9.91□□□□□ -0.82
SKP1P3-201ENST00000429280 STK25O00506 426 aa9.89□□□□□ -0.83
SKP1P3-201ENST00000429280 CHRDL2Q6WN34 429 aa9.87□□□□□ -0.83
SKP1P3-201ENST00000429280 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
SKP1P3-201ENST00000429280 KDM2AQ9Y2K7 1162 aa9.87□□□□□ -0.83
SKP1P3-201ENST00000429280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.86□□□□□ -0.83
SKP1P3-201ENST00000429280 ZFP91Q96JP5 570 aaPredicted RBP9.86□□□□□ -0.83
SKP1P3-201ENST00000429280 NKX1-1Q15270 411 aaPredicted RBP9.85□□□□□ -0.83
SKP1P3-201ENST00000429280 ZNF467Q7Z7K2 595 aaPredicted RBP9.83□□□□□ -0.84
SKP1P3-201ENST00000429280 PIP4P2Q8N4L2 257 aa9.83□□□□□ -0.84
SKP1P3-201ENST00000429280 BCL11BQ9C0K0 894 aaPredicted RBP9.83□□□□□ -0.84
SKP1P3-201ENST00000429280 STK24Q9Y6E0 443 aa9.83□□□□□ -0.84
SKP1P3-201ENST00000429280 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
SKP1P3-201ENST00000429280 GTPBP6O43824 516 aaPredicted RBP9.81□□□□□ -0.84
SKP1P3-201ENST00000429280 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
SKP1P3-201ENST00000429280 BCANQ96GW7 911 aa9.79□□□□□ -0.84
SKP1P3-201ENST00000429280 PDAP1Q13442 181 aaKnown RBP9.76□□□□□ -0.85
SKP1P3-201ENST00000429280 RYDENQ9NUL5 291 aaKnown RBP9.76□□□□□ -0.85
SKP1P3-201ENST00000429280 ZNF579Q8NAF0 562 aaKnown RBP9.75□□□□□ -0.85
SKP1P3-201ENST00000429280 PCDHB8Q9UN66 801 aa9.75□□□□□ -0.85
SKP1P3-201ENST00000429280 PCDHB13Q9Y5F0 798 aa9.75□□□□□ -0.85
SKP1P3-201ENST00000429280 PSEN1P49768 467 aa9.71□□□□□ -0.86
SKP1P3-201ENST00000429280 KIF12Q96FN5 646 aa9.7□□□□□ -0.86
SKP1P3-201ENST00000429280 MAP3K13O43283 966 aa9.69□□□□□ -0.86
SKP1P3-201ENST00000429280 IFNL1Q8IU54 200 aa9.68□□□□□ -0.86
SKP1P3-201ENST00000429280 ZRANB1Q9UGI0 708 aa9.67□□□□□ -0.86
SKP1P3-201ENST00000429280 CD44P16070 742 aaKnown RBP9.66□□□□□ -0.86
SKP1P3-201ENST00000429280 MFRPQ9BY79 579 aa9.6□□□□□ -0.87
SKP1P3-201ENST00000429280 PHF12Q96QT6 1004 aa9.59□□□□□ -0.87
SKP1P3-201ENST00000429280 C19orf67A6NJJ6 358 aa9.57□□□□□ -0.88
SKP1P3-201ENST00000429280 SOX12O15370 315 aa9.57□□□□□ -0.88
SKP1P3-201ENST00000429280 EFCAB3Q8N7B9 438 aa9.57□□□□□ -0.88
SKP1P3-201ENST00000429280 CABP2Q9NPB3 220 aa9.57□□□□□ -0.88
SKP1P3-201ENST00000429280 NLRP6P59044 892 aa9.55□□□□□ -0.88
SKP1P3-201ENST00000429280 NBR1Q14596 966 aa9.54□□□□□ -0.88
SKP1P3-201ENST00000429280 FBXO22Q8NEZ5 403 aa9.53□□□□□ -0.88
SKP1P3-201ENST00000429280 CADPS2Q86UW7 1296 aa9.51□□□□□ -0.89
SKP1P3-201ENST00000429280 MS4A3Q96HJ5 214 aa9.51□□□□□ -0.89
SKP1P3-201ENST00000429280 PHF8Q9UPP1 1060 aa9.51□□□□□ -0.89
SKP1P3-201ENST00000429280 PPP1R37O75864 691 aa9.49□□□□□ -0.89
SKP1P3-201ENST00000429280 PRKCSHP14314 528 aaPredicted RBP9.49□□□□□ -0.89
SKP1P3-201ENST00000429280 TMEM106CQ9BVX2 250 aa9.49□□□□□ -0.89
SKP1P3-201ENST00000429280 GOLGA2Q08379 1002 aa9.48□□□□□ -0.89
SKP1P3-201ENST00000429280 WDR70Q9NW82 654 aa9.48□□□□□ -0.89
SKP1P3-201ENST00000429280 TRPC6Q9Y210 931 aa9.48□□□□□ -0.89
SKP1P3-201ENST00000429280 TIE1P35590 1138 aa9.45□□□□□ -0.9
SKP1P3-201ENST00000429280 TPRNQ4KMQ1 711 aa9.45□□□□□ -0.9
SKP1P3-201ENST00000429280 P3H3Q8IVL6 736 aa9.45□□□□□ -0.9
SKP1P3-201ENST00000429280 MKRN3Q13064 507 aaKnown RBP9.43□□□□□ -0.9
SKP1P3-201ENST00000429280 MS4A4AQ96JQ5 239 aa9.42□□□□□ -0.9
SKP1P3-201ENST00000429280 HAX1O00165 279 aa9.41□□□□□ -0.9
SKP1P3-201ENST00000429280 CLCN6P51797 869 aa9.41□□□□□ -0.9
SKP1P3-201ENST00000429280 TTLL13PA6NNM8 815 aa9.4□□□□□ -0.9
SKP1P3-201ENST00000429280 POTEHQ6S545 545 aa9.4□□□□□ -0.9
SKP1P3-201ENST00000429280 GALR2O43603 387 aaPredicted RBP9.38□□□□□ -0.91
SKP1P3-201ENST00000429280 KCNV2Q8TDN2 545 aa9.38□□□□□ -0.91
SKP1P3-201ENST00000429280 BMP2KQ9NSY1 1161 aaPredicted RBP9.38□□□□□ -0.91
SKP1P3-201ENST00000429280 EVX2Q03828 476 aa9.36□□□□□ -0.91
SKP1P3-201ENST00000429280 ILDR1Q86SU0 546 aaPredicted RBP9.35□□□□□ -0.91
SKP1P3-201ENST00000429280 PDE4AP27815 886 aa9.34□□□□□ -0.91
SKP1P3-201ENST00000429280 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.34□□□□□ -0.91
SKP1P3-201ENST00000429280 TRIM35Q9UPQ4 493 aa9.34□□□□□ -0.91
SKP1P3-201ENST00000429280 E2F4Q16254 413 aa9.33□□□□□ -0.92
SKP1P3-201ENST00000429280 NCKAP5LQ9HCH0 1330 aa9.32□□□□□ -0.92
SKP1P3-201ENST00000429280 LARP6Q9BRS8 491 aaKnown RBP9.32□□□□□ -0.92
SKP1P3-201ENST00000429280 ARHGEF1Q92888 912 aaKnown RBP9.31□□□□□ -0.92
SKP1P3-201ENST00000429280 CRISPLD2Q9H0B8 497 aa9.31□□□□□ -0.92
SKP1P3-201ENST00000429280 MFSD10Q14728 455 aa9.29□□□□□ -0.92
SKP1P3-201ENST00000429280 ATN1P54259 1190 aaPredicted RBP9.28□□□□□ -0.92
SKP1P3-201ENST00000429280 DDX27Q96GQ7 796 aaKnown RBP9.27□□□□□ -0.93
SKP1P3-201ENST00000429280 NISCHQ9Y2I1 1504 aa9.26□□□□□ -0.93
SKP1P3-201ENST00000429280 ATMINO43313 823 aaPredicted RBP9.26□□□□□ -0.93
SKP1P3-201ENST00000429280 ASTLQ6HA08 431 aaPredicted RBP9.26□□□□□ -0.93
SKP1P3-201ENST00000429280 DPY19L2Q6NUT2 758 aa9.25□□□□□ -0.93
SKP1P3-201ENST00000429280 IER5LQ5T953 404 aa9.24□□□□□ -0.93
SKP1P3-201ENST00000429280 IRX5P78411 483 aaPredicted RBP9.23□□□□□ -0.93
SKP1P3-201ENST00000429280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.23□□□□□ -0.93
SKP1P3-201ENST00000429280 PDCD7Q8N8D1 485 aaKnown RBP9.23□□□□□ -0.93
SKP1P3-201ENST00000429280 OCEL1Q9H607 264 aa9.23□□□□□ -0.93
SKP1P3-201ENST00000429280 GPHNQ9NQX3 736 aaPredicted RBP9.22□□□□□ -0.93
SKP1P3-201ENST00000429280 TULP1O00294 542 aaPredicted RBP9.21□□□□□ -0.94
SKP1P3-201ENST00000429280 GABBR2O75899 941 aa9.21□□□□□ -0.94
SKP1P3-201ENST00000429280 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms