RNA–Protein interactions for RNA: ENST00000428222.1

AC004835.1-201, humanhuman

TSL 5 BASIC

Gene AC004835.1, Length 2,907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004835.1-201ENST00000428222 HMGXB3Q12766 1538 aa24.37■■□□□ 1.49
AC004835.1-201ENST00000428222 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
AC004835.1-201ENST00000428222 FHOD3Q2V2M9 1422 aa24.33■■□□□ 1.49
AC004835.1-201ENST00000428222 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
AC004835.1-201ENST00000428222 ARID3CA6NKF2 412 aa24.32■■□□□ 1.48
AC004835.1-201ENST00000428222 RAD54L2Q9Y4B4 1467 aa24.3■■□□□ 1.48
AC004835.1-201ENST00000428222 SETD5Q9C0A6 1442 aa24.26■■□□□ 1.47
AC004835.1-201ENST00000428222 TRIM52Q96A61 297 aa24.24■■□□□ 1.47
AC004835.1-201ENST00000428222 LRRC9Q6ZRR7 1453 aa24.21■■□□□ 1.47
AC004835.1-201ENST00000428222 MAPKBP1O60336 1514 aa24.2■■□□□ 1.46
AC004835.1-201ENST00000428222 TIAM1Q13009 1591 aa24.19■■□□□ 1.46
AC004835.1-201ENST00000428222 NESP48681 1621 aa24.18■■□□□ 1.46
AC004835.1-201ENST00000428222 WDR97A6NE52 1622 aa24.16■■□□□ 1.46
AC004835.1-201ENST00000428222 CHIC2Q9UKJ5 165 aa24.16■■□□□ 1.46
AC004835.1-201ENST00000428222 FANCD2Q9BXW9 1451 aa24.14■■□□□ 1.46
AC004835.1-201ENST00000428222 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
AC004835.1-201ENST00000428222 FKBP8Q14318 412 aa24.13■■□□□ 1.45
AC004835.1-201ENST00000428222 TDRD9Q8NDG6 1382 aaKnown RBP24.13■■□□□ 1.45
AC004835.1-201ENST00000428222 PCF11O94913 1555 aaKnown RBP24.09■■□□□ 1.45
AC004835.1-201ENST00000428222 FHAD1B1AJZ9 1412 aa24.08■■□□□ 1.44
AC004835.1-201ENST00000428222 RRP7BPQ9NSQ0 103 aa24.07■■□□□ 1.44
AC004835.1-201ENST00000428222 MTUS2Q5JR59 1369 aa24.06■■□□□ 1.44
AC004835.1-201ENST00000428222 PPP1R15AO75807 674 aaPredicted RBP24.03■■□□□ 1.44
AC004835.1-201ENST00000428222 CNGB1Q14028 1251 aaPredicted RBP24.02■■□□□ 1.44
AC004835.1-201ENST00000428222 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
AC004835.1-201ENST00000428222 TONSLQ96HA7 1378 aa24.01■■□□□ 1.43
AC004835.1-201ENST00000428222 TSHZ2Q9NRE2 1034 aa24.01■■□□□ 1.43
AC004835.1-201ENST00000428222 ANP32CO43423 234 aa24■■□□□ 1.43
AC004835.1-201ENST00000428222 POLA1P09884 1462 aaPredicted RBP23.99■■□□□ 1.43
AC004835.1-201ENST00000428222 MYT1Q01538 1121 aa23.99■■□□□ 1.43
AC004835.1-201ENST00000428222 FOXD1Q16676 465 aa23.96■■□□□ 1.43
AC004835.1-201ENST00000428222 IRX6P78412 446 aaPredicted RBP23.94■■□□□ 1.42
AC004835.1-201ENST00000428222 TOPBP1Q92547 1522 aa23.92■■□□□ 1.42
AC004835.1-201ENST00000428222 PTPRKQ15262 1439 aa23.92■■□□□ 1.42
AC004835.1-201ENST00000428222 FGD6Q6ZV73 1430 aa23.88■■□□□ 1.41
AC004835.1-201ENST00000428222 NEFLP07196 543 aa23.87■■□□□ 1.41
AC004835.1-201ENST00000428222 CASKIN1Q8WXD9 1431 aa23.85■■□□□ 1.41
AC004835.1-201ENST00000428222 MAP3K1Q13233 1512 aa23.84■■□□□ 1.41
AC004835.1-201ENST00000428222 CCDC18Q5T9S5 1454 aa23.84■■□□□ 1.41
AC004835.1-201ENST00000428222 FYCO1Q9BQS8 1478 aa23.81■■□□□ 1.4
AC004835.1-201ENST00000428222 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
AC004835.1-201ENST00000428222 SENP3-EIF4A1A0A087X0R7 540 aa23.81■■□□□ 1.4
AC004835.1-201ENST00000428222 HNRNPUQ00839 825 aaKnown RBP eCLIP23.81■■□□□ 1.4
AC004835.1-201ENST00000428222 PRDM2Q13029 1718 aa23.8■■□□□ 1.4
AC004835.1-201ENST00000428222 AQRO60306 1485 aaKnown RBP eCLIP23.8■■□□□ 1.4
AC004835.1-201ENST00000428222 FMN1Q68DA7 1419 aa23.79■■□□□ 1.4
AC004835.1-201ENST00000428222 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
AC004835.1-201ENST00000428222 CFAP43Q8NDM7 1665 aa23.77■■□□□ 1.4
AC004835.1-201ENST00000428222 URB2Q14146 1524 aaKnown RBP23.75■■□□□ 1.39
AC004835.1-201ENST00000428222 POLR3GLQ9BT43 218 aa23.75■■□□□ 1.39
AC004835.1-201ENST00000428222 NCOA2Q15596 1464 aa23.74■■□□□ 1.39
AC004835.1-201ENST00000428222 HSPA5P11021 654 aaKnown RBP23.73■■□□□ 1.39
AC004835.1-201ENST00000428222 TIMELESSQ9UNS1 1208 aa23.7■■□□□ 1.39
AC004835.1-201ENST00000428222 GAPVD1Q14C86 1478 aa23.7■■□□□ 1.39
AC004835.1-201ENST00000428222 NAIPQ13075 1403 aa23.69■■□□□ 1.38
AC004835.1-201ENST00000428222 SNAPC4Q5SXM2 1469 aa23.69■■□□□ 1.38
AC004835.1-201ENST00000428222 CCDC184Q52MB2 194 aa23.69■■□□□ 1.38
AC004835.1-201ENST00000428222 ZNF326Q5BKZ1 582 aaKnown RBP23.67■■□□□ 1.38
AC004835.1-201ENST00000428222 FAM9BQ8IZU0 186 aa23.67■■□□□ 1.38
AC004835.1-201ENST00000428222 MYOM3Q5VTT5 1437 aa23.67■■□□□ 1.38
AC004835.1-201ENST00000428222 UACAQ9BZF9 1416 aa23.66■■□□□ 1.38
AC004835.1-201ENST00000428222 EFCAB5A4FU69 1503 aa23.66■■□□□ 1.38
AC004835.1-201ENST00000428222 HFM1A2PYH4 1435 aa23.65■■□□□ 1.38
AC004835.1-201ENST00000428222 ZNF644Q9H582 1327 aaPredicted RBP23.65■■□□□ 1.38
AC004835.1-201ENST00000428222 CCER2I3L3R5 266 aa23.65■■□□□ 1.38
AC004835.1-201ENST00000428222 WASHC2AQ641Q2 1341 aa23.64■■□□□ 1.37
AC004835.1-201ENST00000428222 L3MBTL2Q969R5 705 aa23.63■■□□□ 1.37
AC004835.1-201ENST00000428222 MPHOSPH9Q99550 1183 aa23.61■■□□□ 1.37
AC004835.1-201ENST00000428222 ZNF777Q9ULD5 760 aaPredicted RBP23.61■■□□□ 1.37
AC004835.1-201ENST00000428222 C11orf95C9JLR9 678 aaPredicted RBP23.6■■□□□ 1.37
AC004835.1-201ENST00000428222 PTPN23Q9H3S7 1636 aa23.6■■□□□ 1.37
AC004835.1-201ENST00000428222 CTTNBP2Q8WZ74 1663 aa23.58■■□□□ 1.37
AC004835.1-201ENST00000428222 MAGI3Q5TCQ9 1506 aa23.57■■□□□ 1.36
AC004835.1-201ENST00000428222 EIF4G2P78344 907 aaKnown RBP eCLIP23.57■■□□□ 1.36
AC004835.1-201ENST00000428222 FBLN2P98095 1184 aa23.57■■□□□ 1.36
AC004835.1-201ENST00000428222 RBM19Q9Y4C8 960 aaKnown RBP23.57■■□□□ 1.36
AC004835.1-201ENST00000428222 CDK13Q14004 1512 aaKnown RBP23.56■■□□□ 1.36
AC004835.1-201ENST00000428222 CUL7Q14999 1698 aa23.55■■□□□ 1.36
AC004835.1-201ENST00000428222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.55■■□□□ 1.36
AC004835.1-201ENST00000428222 GRIN2BQ13224 1484 aa23.53■■□□□ 1.36
AC004835.1-201ENST00000428222 LRRIQ1Q96JM4 1722 aa23.53■■□□□ 1.36
AC004835.1-201ENST00000428222 SLC4A1APQ9BWU0 796 aaKnown RBP23.52■■□□□ 1.36
AC004835.1-201ENST00000428222 NBPF8Q3BBV2 869 aa23.5■■□□□ 1.35
AC004835.1-201ENST00000428222 ANP32EQ9BTT0 268 aa23.49■■□□□ 1.35
AC004835.1-201ENST00000428222 PDS5BQ9NTI5 1447 aa23.49■■□□□ 1.35
AC004835.1-201ENST00000428222 MRS2Q9HD23 443 aa23.49■■□□□ 1.35
AC004835.1-201ENST00000428222 KDM6BO15054 1643 aa23.49■■□□□ 1.35
AC004835.1-201ENST00000428222 SUPT6HQ7KZ85 1726 aaKnown RBP23.44■■□□□ 1.34
AC004835.1-201ENST00000428222 DENND4BO75064 1496 aaPredicted RBP23.41■■□□□ 1.34
AC004835.1-201ENST00000428222 EHBP1L1Q8N3D4 1523 aa23.41■■□□□ 1.34
AC004835.1-201ENST00000428222 SAMD9Q5K651 1589 aa23.41■■□□□ 1.34
AC004835.1-201ENST00000428222 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
AC004835.1-201ENST00000428222 ABCA5Q8WWZ7 1642 aa23.39■■□□□ 1.34
AC004835.1-201ENST00000428222 EPRSP07814 1512 aaKnown RBP23.39■■□□□ 1.34
AC004835.1-201ENST00000428222 UGGT2Q9NYU1 1516 aa23.39■■□□□ 1.34
AC004835.1-201ENST00000428222 KDM5BQ9UGL1 1544 aa23.38■■□□□ 1.33
AC004835.1-201ENST00000428222 B4GALNT3Q6L9W6 998 aa23.38■■□□□ 1.33
AC004835.1-201ENST00000428222 THOC2Q8NI27 1593 aaKnown RBP23.37■■□□□ 1.33
AC004835.1-201ENST00000428222 PRKRIP1Q9H875 184 aaPredicted RBP23.36■■□□□ 1.33
AC004835.1-201ENST00000428222 KIF21AQ7Z4S6 1674 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms