RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 ESF1Q9H501 851 aaKnown RBP16.69■□□□□ 0.26
HDLBP-214ENST00000427183 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
HDLBP-214ENST00000427183 TONSLQ96HA7 1378 aa16.68■□□□□ 0.26
HDLBP-214ENST00000427183 AMER1Q5JTC6 1135 aaPredicted RBP16.68■□□□□ 0.26
HDLBP-214ENST00000427183 PLEKHG5O94827 1062 aa16.68■□□□□ 0.26
HDLBP-214ENST00000427183 WDR43Q15061 677 aaKnown RBP eCLIP16.68■□□□□ 0.267e-6■■□□□ 14.2
HDLBP-214ENST00000427183 NAP1L5Q96NT1 182 aaPredicted RBP16.65■□□□□ 0.26
HDLBP-214ENST00000427183 MYH16Q9H6N6 1097 aa16.65■□□□□ 0.26
HDLBP-214ENST00000427183 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
HDLBP-214ENST00000427183 MRS2Q9HD23 443 aa16.63■□□□□ 0.25
HDLBP-214ENST00000427183 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
HDLBP-214ENST00000427183 WIZO95785 1651 aa16.61■□□□□ 0.25
HDLBP-214ENST00000427183 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
HDLBP-214ENST00000427183 BECN1Q14457 450 aa16.6■□□□□ 0.25
HDLBP-214ENST00000427183 ZBTB7CA1YPR0 619 aa16.6■□□□□ 0.25
HDLBP-214ENST00000427183 TAOK2Q9UL54 1235 aa16.59■□□□□ 0.25
HDLBP-214ENST00000427183 HIRIP3Q9BW71 556 aaPredicted RBP16.59■□□□□ 0.25
HDLBP-214ENST00000427183 GOLGA6L22H0YM25 854 aa16.58■□□□□ 0.25
HDLBP-214ENST00000427183 ZRSR1Q15695 479 aaKnown RBP16.57■□□□□ 0.24
HDLBP-214ENST00000427183 DDRGK1Q96HY6 314 aa16.57■□□□□ 0.24
HDLBP-214ENST00000427183 PLCB2Q00722 1185 aa16.56■□□□□ 0.24
HDLBP-214ENST00000427183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.56■□□□□ 0.243e-10■■□□□ 13.2
HDLBP-214ENST00000427183 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
HDLBP-214ENST00000427183 LAS1LQ9Y4W2 734 aaKnown RBP16.53■□□□□ 0.24
HDLBP-214ENST00000427183 TOP2AP11388 1531 aaKnown RBP16.51■□□□□ 0.23
HDLBP-214ENST00000427183 CHIC2Q9UKJ5 165 aa16.51■□□□□ 0.23
HDLBP-214ENST00000427183 EEA1Q15075 1411 aa16.5■□□□□ 0.23
HDLBP-214ENST00000427183 MIER1Q8N108 512 aa16.5■□□□□ 0.23
HDLBP-214ENST00000427183 ANP32EQ9BTT0 268 aa16.49■□□□□ 0.23
HDLBP-214ENST00000427183 ERICH6BQ5W0A0 696 aa16.48■□□□□ 0.23
HDLBP-214ENST00000427183 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
HDLBP-214ENST00000427183 CCDC88BA6NC98 1476 aa16.46■□□□□ 0.23
HDLBP-214ENST00000427183 C14orf37Q86TY3 774 aa16.46■□□□□ 0.23
HDLBP-214ENST00000427183 ARID4BQ4LE39 1312 aaPredicted RBP16.45■□□□□ 0.22
HDLBP-214ENST00000427183 SMARCA4P51532 1647 aa16.44■□□□□ 0.22
HDLBP-214ENST00000427183 WRNQ14191 1432 aaPredicted RBP eCLIP16.4■□□□□ 0.22
HDLBP-214ENST00000427183 CEP162Q5TB80 1403 aa16.39■□□□□ 0.21
HDLBP-214ENST00000427183 BAZ1BQ9UIG0 1483 aaKnown RBP16.39■□□□□ 0.21
HDLBP-214ENST00000427183 GOLGA3Q08378 1498 aa16.38■□□□□ 0.21
HDLBP-214ENST00000427183 TNIKQ9UKE5 1360 aa16.37■□□□□ 0.21
HDLBP-214ENST00000427183 ABCC8Q09428 1581 aa16.37■□□□□ 0.21
HDLBP-214ENST00000427183 CASC1Q6TDU7 716 aa16.36■□□□□ 0.21
HDLBP-214ENST00000427183 PPM1GO15355 546 aaPredicted RBP16.35■□□□□ 0.21
HDLBP-214ENST00000427183 RGS3P49796 1198 aa16.35■□□□□ 0.21
HDLBP-214ENST00000427183 SUPT16HQ9Y5B9 1047 aaKnown RBP16.35■□□□□ 0.21
HDLBP-214ENST00000427183 ARID3AQ99856 593 aa16.34■□□□□ 0.21
HDLBP-214ENST00000427183 NAP1L2Q9ULW6 460 aaPredicted RBP16.32■□□□□ 0.2
HDLBP-214ENST00000427183 FTSJ3Q8IY81 847 aaKnown RBP16.32■□□□□ 0.2
HDLBP-214ENST00000427183 NEUROD2Q15784 382 aa16.31■□□□□ 0.2
HDLBP-214ENST00000427183 HSP90AB1P08238 724 aaKnown RBP16.3■□□□□ 0.2
HDLBP-214ENST00000427183 GOLGA6L6A8MZA4 724 aa16.3■□□□□ 0.2
HDLBP-214ENST00000427183 SOGA1O94964 1423 aa16.29■□□□□ 0.2
HDLBP-214ENST00000427183 NOP58Q9Y2X3 529 aaKnown RBP16.28■□□□□ 0.2
HDLBP-214ENST00000427183 SPRYD3Q8NCJ5 442 aa16.27■□□□□ 0.2
HDLBP-214ENST00000427183 SMARCA2P51531 1590 aa16.27■□□□□ 0.2
HDLBP-214ENST00000427183 FGD1P98174 961 aa16.27■□□□□ 0.19
HDLBP-214ENST00000427183 CEP164Q9UPV0 1460 aa16.27■□□□□ 0.19
HDLBP-214ENST00000427183 CLSTN1O94985 981 aa16.26■□□□□ 0.19
HDLBP-214ENST00000427183 FRAT1Q92837 279 aaPredicted RBP16.24■□□□□ 0.19
HDLBP-214ENST00000427183 CLIP1P30622 1438 aa16.24■□□□□ 0.19
HDLBP-214ENST00000427183 EIF4G2P78344 907 aaKnown RBP eCLIP16.24■□□□□ 0.19
HDLBP-214ENST00000427183 CHAF1AQ13111 956 aaPredicted RBP16.24■□□□□ 0.19
HDLBP-214ENST00000427183 NPM1P06748 294 aaKnown RBP eCLIP16.23■□□□□ 0.19
HDLBP-214ENST00000427183 MSNP26038 577 aaKnown RBP16.23■□□□□ 0.19
HDLBP-214ENST00000427183 DRC7Q8IY82 874 aa16.23■□□□□ 0.19
HDLBP-214ENST00000427183 HAP1P54257 671 aaPredicted RBP16.22■□□□□ 0.19
HDLBP-214ENST00000427183 NRDCO43847 1150 aa16.21■□□□□ 0.19
HDLBP-214ENST00000427183 KCNJ4P48050 445 aa16.21■□□□□ 0.19
HDLBP-214ENST00000427183 GOLGA6L4A6NEF3 574 aa16.2■□□□□ 0.18
HDLBP-214ENST00000427183 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
HDLBP-214ENST00000427183 DEKP35659 375 aaKnown RBP16.2■□□□□ 0.18
HDLBP-214ENST00000427183 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.2■□□□□ 0.18
HDLBP-214ENST00000427183 OS9Q13438 667 aaPredicted RBP16.19■□□□□ 0.18
HDLBP-214ENST00000427183 PPP1R15AO75807 674 aaPredicted RBP16.19■□□□□ 0.18
HDLBP-214ENST00000427183 TSPY4P0CV99 314 aa16.18■□□□□ 0.18
HDLBP-214ENST00000427183 TSPY10P0CW01 314 aa16.18■□□□□ 0.18
HDLBP-214ENST00000427183 NPHP1O15259 732 aa16.17■□□□□ 0.18
HDLBP-214ENST00000427183 CFAP53Q96M91 514 aa16.17■□□□□ 0.18
HDLBP-214ENST00000427183 B4GALNT3Q6L9W6 998 aa16.16■□□□□ 0.18
HDLBP-214ENST00000427183 RRP7BPQ9NSQ0 103 aa16.16■□□□□ 0.18
HDLBP-214ENST00000427183 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
HDLBP-214ENST00000427183 KNSTRNQ9Y448 316 aa16.12■□□□□ 0.17
HDLBP-214ENST00000427183 PPP4R2Q9NY27 417 aa16.12■□□□□ 0.17
HDLBP-214ENST00000427183 HSCBQ8IWL3 235 aa16.12■□□□□ 0.17
HDLBP-214ENST00000427183 MAPK8IP3Q9UPT6 1336 aa16.11■□□□□ 0.17
HDLBP-214ENST00000427183 PNNQ9H307 717 aaKnown RBP16.1■□□□□ 0.17
HDLBP-214ENST00000427183 LMOD2Q6P5Q4 547 aa16.1■□□□□ 0.17
HDLBP-214ENST00000427183 TNNT3P45378 269 aaPredicted RBP16.09■□□□□ 0.17
HDLBP-214ENST00000427183 ISY1Q9ULR0 285 aaKnown RBP16.09■□□□□ 0.17
HDLBP-214ENST00000427183 GOLGA2Q08379 1002 aa16.08■□□□□ 0.17
HDLBP-214ENST00000427183 L1TD1Q5T7N2 865 aaKnown RBP16.08■□□□□ 0.17
HDLBP-214ENST00000427183 GZF1Q9H116 711 aaPredicted RBP16.08■□□□□ 0.17
HDLBP-214ENST00000427183 PDE4CQ08493 712 aa16.08■□□□□ 0.16
HDLBP-214ENST00000427183 NOC3LQ8WTT2 800 aaKnown RBP16.06■□□□□ 0.16
HDLBP-214ENST00000427183 CC2D1BQ5T0F9 858 aaKnown RBP16.05■□□□□ 0.16
HDLBP-214ENST00000427183 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
HDLBP-214ENST00000427183 U2SURPO15042 1029 aaKnown RBP16.03■□□□□ 0.16
HDLBP-214ENST00000427183 MTUS2Q5JR59 1369 aa16.03■□□□□ 0.16
HDLBP-214ENST00000427183 RUSC2Q8N2Y8 1516 aa16.03■□□□□ 0.16
HDLBP-214ENST00000427183 PRM3Q9NNZ6 103 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms