RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 DDX10Q13206 875 aaKnown RBP20.73■□□□□ 0.91
ERCC3-202ENST00000426778 MAPKBP1O60336 1514 aa20.71■□□□□ 0.91
ERCC3-202ENST00000426778 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
ERCC3-202ENST00000426778 TIAM1Q13009 1591 aa20.7■□□□□ 0.9
ERCC3-202ENST00000426778 FHOD3Q2V2M9 1422 aa20.68■□□□□ 0.9
ERCC3-202ENST00000426778 BCANQ96GW7 911 aa20.67■□□□□ 0.9
ERCC3-202ENST00000426778 LRRC9Q6ZRR7 1453 aa20.67■□□□□ 0.9
ERCC3-202ENST00000426778 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
ERCC3-202ENST00000426778 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
ERCC3-202ENST00000426778 WDR97A6NE52 1622 aa20.62■□□□□ 0.89
ERCC3-202ENST00000426778 PCF11O94913 1555 aaKnown RBP20.6■□□□□ 0.89
ERCC3-202ENST00000426778 NESP48681 1621 aa20.55■□□□□ 0.88
ERCC3-202ENST00000426778 FANCD2Q9BXW9 1451 aa20.55■□□□□ 0.88
ERCC3-202ENST00000426778 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
ERCC3-202ENST00000426778 FHAD1B1AJZ9 1412 aa20.52■□□□□ 0.88
ERCC3-202ENST00000426778 TRIM52Q96A61 297 aa20.51■□□□□ 0.87
ERCC3-202ENST00000426778 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
ERCC3-202ENST00000426778 FKBP8Q14318 412 aa20.46■□□□□ 0.87
ERCC3-202ENST00000426778 POLA1P09884 1462 aaPredicted RBP20.46■□□□□ 0.87
ERCC3-202ENST00000426778 ARID3CA6NKF2 412 aa20.45■□□□□ 0.86
ERCC3-202ENST00000426778 MAP3K1Q13233 1512 aa20.45■□□□□ 0.86
ERCC3-202ENST00000426778 TSHZ2Q9NRE2 1034 aa20.44■□□□□ 0.86
ERCC3-202ENST00000426778 PPP1R15AO75807 674 aaPredicted RBP20.44■□□□□ 0.86
ERCC3-202ENST00000426778 TDRD9Q8NDG6 1382 aaKnown RBP20.44■□□□□ 0.86
ERCC3-202ENST00000426778 CFAP43Q8NDM7 1665 aa20.43■□□□□ 0.86
ERCC3-202ENST00000426778 CHIC2Q9UKJ5 165 aa20.4■□□□□ 0.86
ERCC3-202ENST00000426778 MTUS2Q5JR59 1369 aa20.4■□□□□ 0.86
ERCC3-202ENST00000426778 TOPBP1Q92547 1522 aa20.4■□□□□ 0.86
ERCC3-202ENST00000426778 DNAJC5BQ9UF47 199 aa20.4■□□□□ 0.86
ERCC3-202ENST00000426778 PTPRKQ15262 1439 aa20.39■□□□□ 0.85
ERCC3-202ENST00000426778 TONSLQ96HA7 1378 aa20.37■□□□□ 0.85
ERCC3-202ENST00000426778 CASKIN1Q8WXD9 1431 aa20.37■□□□□ 0.85
ERCC3-202ENST00000426778 RRP7BPQ9NSQ0 103 aa20.36■□□□□ 0.85
ERCC3-202ENST00000426778 FGD6Q6ZV73 1430 aa20.35■□□□□ 0.85
ERCC3-202ENST00000426778 FYCO1Q9BQS8 1478 aa20.35■□□□□ 0.85
ERCC3-202ENST00000426778 ANP32CO43423 234 aa20.35■□□□□ 0.85
ERCC3-202ENST00000426778 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
ERCC3-202ENST00000426778 DNMBPQ6XZF7 1577 aa20.34■□□□□ 0.85
ERCC3-202ENST00000426778 CCDC18Q5T9S5 1454 aa20.32■□□□□ 0.84
ERCC3-202ENST00000426778 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.843e-7■■■■■ 38
ERCC3-202ENST00000426778 FMN1Q68DA7 1419 aa20.27■□□□□ 0.84
ERCC3-202ENST00000426778 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
ERCC3-202ENST00000426778 MYT1Q01538 1121 aa20.26■□□□□ 0.83
ERCC3-202ENST00000426778 CTTNBP2Q8WZ74 1663 aa20.26■□□□□ 0.83
ERCC3-202ENST00000426778 FOXD1Q16676 465 aa20.26■□□□□ 0.83
ERCC3-202ENST00000426778 EFCAB5A4FU69 1503 aa20.25■□□□□ 0.83
ERCC3-202ENST00000426778 URB2Q14146 1524 aaKnown RBP20.25■□□□□ 0.83
ERCC3-202ENST00000426778 IRX6P78412 446 aaPredicted RBP20.24■□□□□ 0.83
ERCC3-202ENST00000426778 NCOA2Q15596 1464 aa20.24■□□□□ 0.83
ERCC3-202ENST00000426778 LRRIQ1Q96JM4 1722 aa20.23■□□□□ 0.83
ERCC3-202ENST00000426778 TIMELESSQ9UNS1 1208 aa20.23■□□□□ 0.83
ERCC3-202ENST00000426778 NEFLP07196 543 aa20.22■□□□□ 0.83
ERCC3-202ENST00000426778 NAIPQ13075 1403 aa20.21■□□□□ 0.83
ERCC3-202ENST00000426778 CUL7Q14999 1698 aa20.2■□□□□ 0.82
ERCC3-202ENST00000426778 HFM1A2PYH4 1435 aa20.19■□□□□ 0.82
ERCC3-202ENST00000426778 PTPN23Q9H3S7 1636 aa20.19■□□□□ 0.82
ERCC3-202ENST00000426778 UACAQ9BZF9 1416 aa20.19■□□□□ 0.82
ERCC3-202ENST00000426778 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
ERCC3-202ENST00000426778 MYOM3Q5VTT5 1437 aa20.18■□□□□ 0.82
ERCC3-202ENST00000426778 HNRNPUQ00839 825 aaKnown RBP eCLIP20.17■□□□□ 0.82
ERCC3-202ENST00000426778 CNGB1Q14028 1251 aaPredicted RBP20.16■□□□□ 0.82
ERCC3-202ENST00000426778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.16■□□□□ 0.82
ERCC3-202ENST00000426778 CCER2I3L3R5 266 aa20.16■□□□□ 0.82
ERCC3-202ENST00000426778 HSPA5P11021 654 aaKnown RBP20.14■□□□□ 0.82
ERCC3-202ENST00000426778 MAGI3Q5TCQ9 1506 aa20.14■□□□□ 0.81
ERCC3-202ENST00000426778 GRIN2BQ13224 1484 aa20.12■□□□□ 0.81
ERCC3-202ENST00000426778 WASHC2AQ641Q2 1341 aa20.11■□□□□ 0.81
ERCC3-202ENST00000426778 CCDC184Q52MB2 194 aa20.11■□□□□ 0.81
ERCC3-202ENST00000426778 SAMD9Q5K651 1589 aa20.08■□□□□ 0.81
ERCC3-202ENST00000426778 KDM6BO15054 1643 aa20.08■□□□□ 0.8
ERCC3-202ENST00000426778 SUPT6HQ7KZ85 1726 aaKnown RBP20.07■□□□□ 0.8
ERCC3-202ENST00000426778 CDK13Q14004 1512 aaKnown RBP20.06■□□□□ 0.8
ERCC3-202ENST00000426778 ABCA5Q8WWZ7 1642 aa20.06■□□□□ 0.8
ERCC3-202ENST00000426778 C11orf95C9JLR9 678 aaPredicted RBP20.06■□□□□ 0.8
ERCC3-202ENST00000426778 L3MBTL2Q969R5 705 aa20.06■□□□□ 0.8
ERCC3-202ENST00000426778 KDM5BQ9UGL1 1544 aa20.05■□□□□ 0.8
ERCC3-202ENST00000426778 RBM19Q9Y4C8 960 aaKnown RBP20.05■□□□□ 0.8
ERCC3-202ENST00000426778 SENP3-EIF4A1A0A087X0R7 540 aa20.04■□□□□ 0.8
ERCC3-202ENST00000426778 MPHOSPH9Q99550 1183 aa20.04■□□□□ 0.8
ERCC3-202ENST00000426778 ZNF644Q9H582 1327 aaPredicted RBP20.04■□□□□ 0.8
ERCC3-202ENST00000426778 DENND4BO75064 1496 aaPredicted RBP20.03■□□□□ 0.8
ERCC3-202ENST00000426778 LAMC3Q9Y6N6 1575 aa20.02■□□□□ 0.8
ERCC3-202ENST00000426778 ANP32EQ9BTT0 268 aa20.02■□□□□ 0.8
ERCC3-202ENST00000426778 EHBP1L1Q8N3D4 1523 aa20.02■□□□□ 0.8
ERCC3-202ENST00000426778 UGGT2Q9NYU1 1516 aa20.02■□□□□ 0.8
ERCC3-202ENST00000426778 FAM9BQ8IZU0 186 aa20.02■□□□□ 0.79
ERCC3-202ENST00000426778 EIF4G2P78344 907 aaKnown RBP eCLIP20■□□□□ 0.79
ERCC3-202ENST00000426778 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
ERCC3-202ENST00000426778 POLR3GLQ9BT43 218 aa19.98■□□□□ 0.79
ERCC3-202ENST00000426778 PDS5BQ9NTI5 1447 aa19.98■□□□□ 0.79
ERCC3-202ENST00000426778 NBPF8Q3BBV2 869 aa19.96■□□□□ 0.79
ERCC3-202ENST00000426778 EPRSP07814 1512 aaKnown RBP19.95■□□□□ 0.78
ERCC3-202ENST00000426778 ZNF326Q5BKZ1 582 aaKnown RBP19.95■□□□□ 0.78
ERCC3-202ENST00000426778 THOC2Q8NI27 1593 aaKnown RBP19.94■□□□□ 0.78
ERCC3-202ENST00000426778 SLC4A1APQ9BWU0 796 aaKnown RBP19.91■□□□□ 0.78
ERCC3-202ENST00000426778 ARHGEF11O15085 1522 aa19.91■□□□□ 0.78
ERCC3-202ENST00000426778 ZNF777Q9ULD5 760 aaPredicted RBP19.91■□□□□ 0.78
ERCC3-202ENST00000426778 MRS2Q9HD23 443 aa19.9■□□□□ 0.78
ERCC3-202ENST00000426778 TARBP1Q13395 1621 aaKnown RBP19.89■□□□□ 0.77
ERCC3-202ENST00000426778 IQGAP2Q13576 1575 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms