RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
SSBP3-207ENST00000426150 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
SSBP3-207ENST00000426150 DCAF8Q5TAQ9 597 aa13.52□□□□□ -0.25
SSBP3-207ENST00000426150 CREBZFQ9NS37 354 aa13.52□□□□□ -0.25
SSBP3-207ENST00000426150 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
SSBP3-207ENST00000426150 PITPNM1O00562 1244 aa13.49□□□□□ -0.25
SSBP3-207ENST00000426150 MNX1P50219 401 aaPredicted RBP13.48□□□□□ -0.25
SSBP3-207ENST00000426150 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
SSBP3-207ENST00000426150 TAOK2Q9UL54 1235 aa13.47□□□□□ -0.25
SSBP3-207ENST00000426150 RIOK3O14730 519 aaKnown RBP13.46□□□□□ -0.25
SSBP3-207ENST00000426150 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
SSBP3-207ENST00000426150 PRKCSHP14314 528 aaPredicted RBP13.42□□□□□ -0.26
SSBP3-207ENST00000426150 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
SSBP3-207ENST00000426150 CHRM1P11229 460 aaPredicted RBP13.37□□□□□ -0.27
SSBP3-207ENST00000426150 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
SSBP3-207ENST00000426150 VGFO15240 615 aaPredicted RBP13.35□□□□□ -0.27
SSBP3-207ENST00000426150 STK25O00506 426 aa13.33□□□□□ -0.28
SSBP3-207ENST00000426150 GTPBP6O43824 516 aaPredicted RBP13.3□□□□□ -0.28
SSBP3-207ENST00000426150 SGIP1Q9BQI5 828 aa13.28□□□□□ -0.28
SSBP3-207ENST00000426150 TPRNQ4KMQ1 711 aa13.27□□□□□ -0.29
SSBP3-207ENST00000426150 PYGBP11216 843 aa13.25□□□□□ -0.29
SSBP3-207ENST00000426150 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.24□□□□□ -0.29
SSBP3-207ENST00000426150 ZFP91Q96JP5 570 aaPredicted RBP13.24□□□□□ -0.29
SSBP3-207ENST00000426150 CHADLQ6NUI6 762 aa13.23□□□□□ -0.29
SSBP3-207ENST00000426150 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
SSBP3-207ENST00000426150 STK24Q9Y6E0 443 aa13.22□□□□□ -0.29
SSBP3-207ENST00000426150 NBR1Q14596 966 aa13.19□□□□□ -0.3
SSBP3-207ENST00000426150 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.38e-6■■■■□ 21.8
SSBP3-207ENST00000426150 RYDENQ9NUL5 291 aaKnown RBP13.16□□□□□ -0.3
SSBP3-207ENST00000426150 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
SSBP3-207ENST00000426150 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
SSBP3-207ENST00000426150 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
SSBP3-207ENST00000426150 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
SSBP3-207ENST00000426150 ZNF467Q7Z7K2 595 aaPredicted RBP13.09□□□□□ -0.31
SSBP3-207ENST00000426150 PIP4P2Q8N4L2 257 aa13.09□□□□□ -0.31
SSBP3-207ENST00000426150 PDAP1Q13442 181 aaKnown RBP13.03□□□□□ -0.32
SSBP3-207ENST00000426150 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
SSBP3-207ENST00000426150 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
SSBP3-207ENST00000426150 CCDC61Q9Y6R9 512 aa12.99□□□□□ -0.33
SSBP3-207ENST00000426150 ZNF579Q8NAF0 562 aaKnown RBP12.95□□□□□ -0.34
SSBP3-207ENST00000426150 PSEN1P49768 467 aa12.94□□□□□ -0.34
SSBP3-207ENST00000426150 CADPS2Q86UW7 1296 aa12.91□□□□□ -0.34
SSBP3-207ENST00000426150 P3H3Q8IVL6 736 aa12.9□□□□□ -0.34
SSBP3-207ENST00000426150 MFRPQ9BY79 579 aa12.89□□□□□ -0.35
SSBP3-207ENST00000426150 PAK3O75914 559 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-207ENST00000426150 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
SSBP3-207ENST00000426150 WDR70Q9NW82 654 aa12.85□□□□□ -0.35
SSBP3-207ENST00000426150 MAP3K13O43283 966 aa12.82□□□□□ -0.36
SSBP3-207ENST00000426150 KIF12Q96FN5 646 aa12.82□□□□□ -0.36
SSBP3-207ENST00000426150 KCNV2Q8TDN2 545 aa12.81□□□□□ -0.36
SSBP3-207ENST00000426150 EFCAB3Q8N7B9 438 aa12.78□□□□□ -0.36
SSBP3-207ENST00000426150 PPP1R37O75864 691 aa12.77□□□□□ -0.37
SSBP3-207ENST00000426150 NLRP6P59044 892 aa12.77□□□□□ -0.37
SSBP3-207ENST00000426150 FBXO22Q8NEZ5 403 aa12.77□□□□□ -0.37
SSBP3-207ENST00000426150 CABP2Q9NPB3 220 aa12.77□□□□□ -0.37
SSBP3-207ENST00000426150 SOX12O15370 315 aa12.75□□□□□ -0.37
SSBP3-207ENST00000426150 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
SSBP3-207ENST00000426150 PHF8Q9UPP1 1060 aa12.73□□□□□ -0.37
SSBP3-207ENST00000426150 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
SSBP3-207ENST00000426150 ZRANB1Q9UGI0 708 aa12.71□□□□□ -0.37
SSBP3-207ENST00000426150 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
SSBP3-207ENST00000426150 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.66□□□□□ -0.386e-6■■■□□ 14.6
SSBP3-207ENST00000426150 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
SSBP3-207ENST00000426150 ARHGEF1Q92888 912 aaKnown RBP12.65□□□□□ -0.38
SSBP3-207ENST00000426150 E2F4Q16254 413 aa12.63□□□□□ -0.39
SSBP3-207ENST00000426150 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
SSBP3-207ENST00000426150 EVX2Q03828 476 aa12.59□□□□□ -0.39
SSBP3-207ENST00000426150 NCKAP5LQ9HCH0 1330 aa12.59□□□□□ -0.39
SSBP3-207ENST00000426150 TULP1O00294 542 aaPredicted RBP12.58□□□□□ -0.4
SSBP3-207ENST00000426150 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
SSBP3-207ENST00000426150 GOLGA2Q08379 1002 aa12.56□□□□□ -0.4
SSBP3-207ENST00000426150 TRPC6Q9Y210 931 aa12.56□□□□□ -0.4
SSBP3-207ENST00000426150 LARP6Q9BRS8 491 aaKnown RBP12.55□□□□□ -0.4
SSBP3-207ENST00000426150 PDE4AP27815 886 aa12.54□□□□□ -0.4
SSBP3-207ENST00000426150 MS4A3Q96HJ5 214 aa12.54□□□□□ -0.4
SSBP3-207ENST00000426150 MFSD10Q14728 455 aa12.52□□□□□ -0.41
SSBP3-207ENST00000426150 CRISPLD2Q9H0B8 497 aa12.52□□□□□ -0.41
SSBP3-207ENST00000426150 TESPA1A2RU30 521 aaPredicted RBP12.51□□□□□ -0.41
SSBP3-207ENST00000426150 SEMA3EO15041 775 aa12.51□□□□□ -0.41
SSBP3-207ENST00000426150 MKRN3Q13064 507 aaKnown RBP12.49□□□□□ -0.41
SSBP3-207ENST00000426150 DDX27Q96GQ7 796 aaKnown RBP12.48□□□□□ -0.41
SSBP3-207ENST00000426150 HAX1O00165 279 aa12.47□□□□□ -0.41
SSBP3-207ENST00000426150 TMEM132AQ24JP5 1023 aa12.46□□□□□ -0.41
SSBP3-207ENST00000426150 ZC3H15Q8WU90 426 aaKnown RBP12.46□□□□□ -0.41
SSBP3-207ENST00000426150 ARIH1Q9Y4X5 557 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-207ENST00000426150 GALR2O43603 387 aaPredicted RBP12.44□□□□□ -0.42
SSBP3-207ENST00000426150 TIE1P35590 1138 aa12.43□□□□□ -0.42
SSBP3-207ENST00000426150 GTF3C3Q9Y5Q9 886 aa12.43□□□□□ -0.42
SSBP3-207ENST00000426150 CAMK2BQ13554 666 aa12.42□□□□□ -0.42
SSBP3-207ENST00000426150 TTLL13PA6NNM8 815 aa12.41□□□□□ -0.42
SSBP3-207ENST00000426150 ILDR1Q86SU0 546 aaPredicted RBP12.41□□□□□ -0.42
SSBP3-207ENST00000426150 SMYD5Q6GMV2 418 aa12.39□□□□□ -0.43
SSBP3-207ENST00000426150 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.43
SSBP3-207ENST00000426150 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
SSBP3-207ENST00000426150 BRPF1P55201 1214 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-207ENST00000426150 POTEHQ6S545 545 aa12.36□□□□□ -0.43
SSBP3-207ENST00000426150 TIMELESSQ9UNS1 1208 aa12.36□□□□□ -0.43
SSBP3-207ENST00000426150 GPHNQ9NQX3 736 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-207ENST00000426150 PPP1R15BQ5SWA1 713 aa12.33□□□□□ -0.44
SSBP3-207ENST00000426150 SLC24A3Q9HC58 644 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms