RNA–Protein interactions for RNA: ENST00000423879.5

AL359853.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL359853.3, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL359853.3-201ENST00000423879 MKRN4PQ13434 485 aaPredicted RBP10.18□□□□□ -0.78
AL359853.3-201ENST00000423879 CYB5RLQ6IPT4 315 aa10.17□□□□□ -0.78
AL359853.3-201ENST00000423879 ZNF608Q9ULD9 1512 aaPredicted RBP10.16□□□□□ -0.78
AL359853.3-201ENST00000423879 CFTRP13569 1480 aa10.16□□□□□ -0.78
AL359853.3-201ENST00000423879 EIF4G3O43432 1585 aaKnown RBP10.12□□□□□ -0.79
AL359853.3-201ENST00000423879 TOP2AP11388 1531 aaKnown RBP10.11□□□□□ -0.79
AL359853.3-201ENST00000423879 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
AL359853.3-201ENST00000423879 IFT140Q96RY7 1462 aa10.09□□□□□ -0.79
AL359853.3-201ENST00000423879 TOPBP1Q92547 1522 aa10.07□□□□□ -0.8
AL359853.3-201ENST00000423879 ARAP1Q96P48 1450 aa10.05□□□□□ -0.8
AL359853.3-201ENST00000423879 RSF1Q96T23 1441 aaPredicted RBP10.04□□□□□ -0.8
AL359853.3-201ENST00000423879 AQRO60306 1485 aaKnown RBP eCLIP10.04□□□□□ -0.8
AL359853.3-201ENST00000423879 DNMBPQ6XZF7 1577 aa10.01□□□□□ -0.81
AL359853.3-201ENST00000423879 TARBP1Q13395 1621 aaKnown RBP10□□□□□ -0.81
AL359853.3-201ENST00000423879 CCDC88BA6NC98 1476 aa10□□□□□ -0.81
AL359853.3-201ENST00000423879 PROM2Q8N271 834 aa10□□□□□ -0.81
AL359853.3-201ENST00000423879 ABCC8Q09428 1581 aa9.97□□□□□ -0.81
AL359853.3-201ENST00000423879 SPDYE2BA6NHP3 402 aa9.97□□□□□ -0.81
AL359853.3-201ENST00000423879 SPDYE6P0CI01 402 aa9.97□□□□□ -0.81
AL359853.3-201ENST00000423879 SPDYE2Q495Y8 402 aa9.97□□□□□ -0.81
AL359853.3-201ENST00000423879 FBXO3Q9UK99 471 aa9.95□□□□□ -0.82
AL359853.3-201ENST00000423879 RAD54L2Q9Y4B4 1467 aa9.95□□□□□ -0.82
AL359853.3-201ENST00000423879 POLA1P09884 1462 aaPredicted RBP9.93□□□□□ -0.82
AL359853.3-201ENST00000423879 SYNJ1O43426 1573 aa9.92□□□□□ -0.82
AL359853.3-201ENST00000423879 SNAPC4Q5SXM2 1469 aa9.92□□□□□ -0.82
AL359853.3-201ENST00000423879 TDRD9Q8NDG6 1382 aaKnown RBP9.92□□□□□ -0.82
AL359853.3-201ENST00000423879 ZNF692Q9BU19 519 aaPredicted RBP9.92□□□□□ -0.82
AL359853.3-201ENST00000423879 PBRM1Q86U86 1689 aa9.92□□□□□ -0.82
AL359853.3-201ENST00000423879 CHMP7Q8WUX9 453 aaPredicted RBP9.91□□□□□ -0.82
AL359853.3-201ENST00000423879 CLASP1Q7Z460 1538 aa9.91□□□□□ -0.82
AL359853.3-201ENST00000423879 SSUH2Q9Y2M2 353 aa9.89□□□□□ -0.83
AL359853.3-201ENST00000423879 SOGA1O94964 1423 aa9.89□□□□□ -0.83
AL359853.3-201ENST00000423879 FGD5Q6ZNL6 1462 aa9.86□□□□□ -0.83
AL359853.3-201ENST00000423879 WDR97A6NE52 1622 aa9.85□□□□□ -0.83
AL359853.3-201ENST00000423879 KIF13AQ9H1H9 1805 aa9.84□□□□□ -0.83
AL359853.3-201ENST00000423879 GAPVD1Q14C86 1478 aa9.84□□□□□ -0.83
AL359853.3-201ENST00000423879 RBM42Q9BTD8 480 aaKnown RBP9.83□□□□□ -0.84
AL359853.3-201ENST00000423879 MAGI1Q96QZ7 1491 aaPredicted RBP9.83□□□□□ -0.84
AL359853.3-201ENST00000423879 ERCC6L2Q5T890 1561 aa9.81□□□□□ -0.84
AL359853.3-201ENST00000423879 GRIN2BQ13224 1484 aa9.81□□□□□ -0.84
AL359853.3-201ENST00000423879 SYNJ2O15056 1496 aa9.8□□□□□ -0.84
AL359853.3-201ENST00000423879 CUX1P39880 1505 aa9.8□□□□□ -0.84
AL359853.3-201ENST00000423879 TSPOAP1O95153 1857 aa9.79□□□□□ -0.84
AL359853.3-201ENST00000423879 AMER1Q5JTC6 1135 aaPredicted RBP9.77□□□□□ -0.85
AL359853.3-201ENST00000423879 STAG3Q9UJ98 1225 aa9.75□□□□□ -0.85
AL359853.3-201ENST00000423879 CEP170Q5SW79 1584 aa9.74□□□□□ -0.85
AL359853.3-201ENST00000423879 ABCA5Q8WWZ7 1642 aa9.74□□□□□ -0.85
AL359853.3-201ENST00000423879 VASPP50552 380 aaPredicted RBP9.73□□□□□ -0.85
AL359853.3-201ENST00000423879 AKT1S1Q96B36 256 aa9.72□□□□□ -0.85
AL359853.3-201ENST00000423879 GRIN2AQ12879 1464 aa9.7□□□□□ -0.86
AL359853.3-201ENST00000423879 ADAMTS12P58397 1594 aa9.69□□□□□ -0.86
AL359853.3-201ENST00000423879 SHROOM2Q13796 1616 aa9.68□□□□□ -0.86
AL359853.3-201ENST00000423879 ABCA10Q8WWZ4 1543 aa9.67□□□□□ -0.86
AL359853.3-201ENST00000423879 KDM6BO15054 1643 aa9.65□□□□□ -0.86
AL359853.3-201ENST00000423879 FAM69CQ0P6D2 419 aa9.65□□□□□ -0.86
AL359853.3-201ENST00000423879 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
AL359853.3-201ENST00000423879 RTN4Q9NQC3 1192 aaKnown RBP9.64□□□□□ -0.87
AL359853.3-201ENST00000423879 NPM1P06748 294 aaKnown RBP eCLIP9.63□□□□□ -0.87
AL359853.3-201ENST00000423879 NUP160Q12769 1436 aa9.63□□□□□ -0.87
AL359853.3-201ENST00000423879 PRG4Q92954 1404 aaPredicted RBP9.63□□□□□ -0.87
AL359853.3-201ENST00000423879 SPDYE1Q8NFV5 336 aaPredicted RBP9.62□□□□□ -0.87
AL359853.3-201ENST00000423879 DIP2BQ9P265 1576 aa9.61□□□□□ -0.87
AL359853.3-201ENST00000423879 BIVM-ERCC5R4GMW8 1640 aa9.6□□□□□ -0.87
AL359853.3-201ENST00000423879 KDM4FA0A1W2PPD8 638 aa9.6□□□□□ -0.87
AL359853.3-201ENST00000423879 TTBK1Q5TCY1 1321 aaPredicted RBP9.59□□□□□ -0.87
AL359853.3-201ENST00000423879 FHAD1B1AJZ9 1412 aa9.59□□□□□ -0.87
AL359853.3-201ENST00000423879 ADCY10Q96PN6 1610 aa9.59□□□□□ -0.87
AL359853.3-201ENST00000423879 WRNQ14191 1432 aaPredicted RBP eCLIP9.58□□□□□ -0.88
AL359853.3-201ENST00000423879 IFNLR1Q8IU57 520 aaPredicted RBP9.58□□□□□ -0.88
AL359853.3-201ENST00000423879 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
AL359853.3-201ENST00000423879 JPH4Q96JJ6 628 aa9.58□□□□□ -0.88
AL359853.3-201ENST00000423879 ABCC10Q5T3U5 1492 aa9.58□□□□□ -0.88
AL359853.3-201ENST00000423879 TOP2BQ02880 1626 aa9.56□□□□□ -0.88
AL359853.3-201ENST00000423879 SUPT5HO00267 1087 aaKnown RBP9.56□□□□□ -0.88
AL359853.3-201ENST00000423879 PLEKHG5O94827 1062 aa9.56□□□□□ -0.88
AL359853.3-201ENST00000423879 ERICH3Q5RHP9 1530 aa9.56□□□□□ -0.88
AL359853.3-201ENST00000423879 RUSC2Q8N2Y8 1516 aa9.56□□□□□ -0.88
AL359853.3-201ENST00000423879 PLCD3Q8N3E9 789 aa9.55□□□□□ -0.88
AL359853.3-201ENST00000423879 MIER1Q8N108 512 aa9.54□□□□□ -0.88
AL359853.3-201ENST00000423879 MAPKBP1O60336 1514 aa9.54□□□□□ -0.88
AL359853.3-201ENST00000423879 CUL7Q14999 1698 aa9.54□□□□□ -0.88
AL359853.3-201ENST00000423879 ZBTB47Q9UFB7 747 aaPredicted RBP9.53□□□□□ -0.88
AL359853.3-201ENST00000423879 PPRC1Q5VV67 1664 aaKnown RBP9.51□□□□□ -0.89
AL359853.3-201ENST00000423879 KLHL34Q8N239 644 aa9.5□□□□□ -0.89
AL359853.3-201ENST00000423879 ADGRL1O94910 1474 aa9.49□□□□□ -0.89
AL359853.3-201ENST00000423879 SPOCK2Q92563 424 aa9.49□□□□□ -0.89
AL359853.3-201ENST00000423879 PRR29P0C7W0 189 aa9.48□□□□□ -0.89
AL359853.3-201ENST00000423879 CLEC11AQ9Y240 323 aa9.48□□□□□ -0.89
AL359853.3-201ENST00000423879 HECW2Q9P2P5 1572 aa9.48□□□□□ -0.89
AL359853.3-201ENST00000423879 PITPNM1O00562 1244 aa9.44□□□□□ -0.9
AL359853.3-201ENST00000423879 PTPRGP23470 1445 aa9.42□□□□□ -0.9
AL359853.3-201ENST00000423879 KIAA0586Q9BVV6 1533 aa9.41□□□□□ -0.9
AL359853.3-201ENST00000423879 ASXL2Q76L83 1435 aa9.41□□□□□ -0.9
AL359853.3-201ENST00000423879 MAP3K4Q9Y6R4 1608 aa9.4□□□□□ -0.9
AL359853.3-201ENST00000423879 ZCCHC11Q5TAX3 1644 aaKnown RBP9.39□□□□□ -0.91
AL359853.3-201ENST00000423879 GLI2P10070 1586 aa9.39□□□□□ -0.91
AL359853.3-201ENST00000423879 ABCC2Q92887 1545 aa9.39□□□□□ -0.91
AL359853.3-201ENST00000423879 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
AL359853.3-201ENST00000423879 COL17A1Q9UMD9 1497 aaPredicted RBP9.38□□□□□ -0.91
AL359853.3-201ENST00000423879 KIF21BO75037 1637 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms