RNA–Protein interactions for RNA: ENST00000419880.7

UBE2W-201, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best) BASIC

Gene UBE2W, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-201ENST00000419880 FHOD3Q2V2M9 1422 aa20.05■□□□□ 0.8
UBE2W-201ENST00000419880 LRRC9Q6ZRR7 1453 aa20.05■□□□□ 0.8
UBE2W-201ENST00000419880 TDRD9Q8NDG6 1382 aaKnown RBP20.05■□□□□ 0.8
UBE2W-201ENST00000419880 ATP1B4Q9UN42 357 aaPredicted RBP20.04■□□□□ 0.8
UBE2W-201ENST00000419880 CLSPNQ9HAW4 1339 aa20.04■□□□□ 0.8
UBE2W-201ENST00000419880 PDS5BQ9NTI5 1447 aa20.03■□□□□ 0.8
UBE2W-201ENST00000419880 CUL7Q14999 1698 aa20.03■□□□□ 0.8
UBE2W-201ENST00000419880 PCF11O94913 1555 aaKnown RBP20.02■□□□□ 0.79
UBE2W-201ENST00000419880 WDR97A6NE52 1622 aa20■□□□□ 0.79
UBE2W-201ENST00000419880 PHLDB1Q86UU1 1377 aa20■□□□□ 0.79
UBE2W-201ENST00000419880 NEUROD1Q13562 356 aa19.97■□□□□ 0.79
UBE2W-201ENST00000419880 ACIN1Q9UKV3 1341 aaKnown RBP19.97■□□□□ 0.79
UBE2W-201ENST00000419880 EFCAB5A4FU69 1503 aa19.96■□□□□ 0.79
UBE2W-201ENST00000419880 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
UBE2W-201ENST00000419880 ABCA5Q8WWZ7 1642 aa19.95■□□□□ 0.78
UBE2W-201ENST00000419880 CTTNBP2Q8WZ74 1663 aa19.94■□□□□ 0.78
UBE2W-201ENST00000419880 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
UBE2W-201ENST00000419880 CFAP43Q8NDM7 1665 aa19.94■□□□□ 0.78
UBE2W-201ENST00000419880 CASKIN1Q8WXD9 1431 aa19.93■□□□□ 0.78
UBE2W-201ENST00000419880 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
UBE2W-201ENST00000419880 RAB3GAP2Q9H2M9 1393 aa19.92■□□□□ 0.78
UBE2W-201ENST00000419880 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
UBE2W-201ENST00000419880 MIER1Q8N108 512 aa19.9■□□□□ 0.78
UBE2W-201ENST00000419880 AQRO60306 1485 aaKnown RBP eCLIP19.89■□□□□ 0.77
UBE2W-201ENST00000419880 CENPBP07199 599 aaPredicted RBP19.87■□□□□ 0.77
UBE2W-201ENST00000419880 FMN1Q68DA7 1419 aa19.86■□□□□ 0.77
UBE2W-201ENST00000419880 SETD5Q9C0A6 1442 aa19.85■□□□□ 0.77
UBE2W-201ENST00000419880 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
UBE2W-201ENST00000419880 SNAPC4Q5SXM2 1469 aa19.83■□□□□ 0.77
UBE2W-201ENST00000419880 SAMD9Q5K651 1589 aa19.81■□□□□ 0.76
UBE2W-201ENST00000419880 MAPKBP1O60336 1514 aa19.79■□□□□ 0.76
UBE2W-201ENST00000419880 YTHDC1Q96MU7 727 aaKnown RBP19.79■□□□□ 0.76
UBE2W-201ENST00000419880 MTUS2Q5JR59 1369 aa19.76■□□□□ 0.75
UBE2W-201ENST00000419880 GTF3C3Q9Y5Q9 886 aa19.74■□□□□ 0.75
UBE2W-201ENST00000419880 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
UBE2W-201ENST00000419880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.72■□□□□ 0.75
UBE2W-201ENST00000419880 FGD6Q6ZV73 1430 aa19.72■□□□□ 0.75
UBE2W-201ENST00000419880 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
UBE2W-201ENST00000419880 LRRIQ1Q96JM4 1722 aa19.72■□□□□ 0.75
UBE2W-201ENST00000419880 PBRM1Q86U86 1689 aa19.7■□□□□ 0.74
UBE2W-201ENST00000419880 SIN3AQ96ST3 1273 aa19.69■□□□□ 0.74
UBE2W-201ENST00000419880 NCOA2Q15596 1464 aa19.66■□□□□ 0.74
UBE2W-201ENST00000419880 ADAMTS12P58397 1594 aa19.65■□□□□ 0.74
UBE2W-201ENST00000419880 PTPRKQ15262 1439 aa19.64■□□□□ 0.73
UBE2W-201ENST00000419880 ZNF608Q9ULD9 1512 aaPredicted RBP19.64■□□□□ 0.73
UBE2W-201ENST00000419880 THOC2Q8NI27 1593 aaKnown RBP19.63■□□□□ 0.73
UBE2W-201ENST00000419880 IQGAP2Q13576 1575 aa19.62■□□□□ 0.73
UBE2W-201ENST00000419880 MYOM3Q5VTT5 1437 aa19.62■□□□□ 0.73
UBE2W-201ENST00000419880 MAGI3Q5TCQ9 1506 aa19.6■□□□□ 0.73
UBE2W-201ENST00000419880 EHBP1L1Q8N3D4 1523 aa19.59■□□□□ 0.73
UBE2W-201ENST00000419880 IFT140Q96RY7 1462 aa19.59■□□□□ 0.73
UBE2W-201ENST00000419880 SUPT6HQ7KZ85 1726 aaKnown RBP19.58■□□□□ 0.73
UBE2W-201ENST00000419880 CCDC18Q5T9S5 1454 aa19.56■□□□□ 0.72
UBE2W-201ENST00000419880 ARID3CA6NKF2 412 aa19.56■□□□□ 0.72
UBE2W-201ENST00000419880 WDR62O43379 1518 aa19.55■□□□□ 0.72
UBE2W-201ENST00000419880 HFM1A2PYH4 1435 aa19.55■□□□□ 0.72
UBE2W-201ENST00000419880 UGGT2Q9NYU1 1516 aa19.55■□□□□ 0.72
UBE2W-201ENST00000419880 ARHGEF11O15085 1522 aa19.54■□□□□ 0.72
UBE2W-201ENST00000419880 EPRSP07814 1512 aaKnown RBP19.53■□□□□ 0.72
UBE2W-201ENST00000419880 HECW1Q76N89 1606 aa19.53■□□□□ 0.72
UBE2W-201ENST00000419880 NAIPQ13075 1403 aa19.52■□□□□ 0.72
UBE2W-201ENST00000419880 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
UBE2W-201ENST00000419880 PTPN23Q9H3S7 1636 aa19.51■□□□□ 0.71
UBE2W-201ENST00000419880 TIMELESSQ9UNS1 1208 aa19.51■□□□□ 0.71
UBE2W-201ENST00000419880 UACAQ9BZF9 1416 aa19.48■□□□□ 0.71
UBE2W-201ENST00000419880 PPP1R15AO75807 674 aaPredicted RBP19.48■□□□□ 0.71
UBE2W-201ENST00000419880 CHIC2Q9UKJ5 165 aa19.47■□□□□ 0.71
UBE2W-201ENST00000419880 KIAA0586Q9BVV6 1533 aa19.47■□□□□ 0.71
UBE2W-201ENST00000419880 RRP7BPQ9NSQ0 103 aa19.46■□□□□ 0.71
UBE2W-201ENST00000419880 ERCC6Q03468 1493 aa19.45■□□□□ 0.7
UBE2W-201ENST00000419880 DISP1Q96F81 1524 aa19.45■□□□□ 0.7
UBE2W-201ENST00000419880 EIF4G3O43432 1585 aaKnown RBP19.45■□□□□ 0.7
UBE2W-201ENST00000419880 TCOF1Q13428 1488 aaKnown RBP19.44■□□□□ 0.7
UBE2W-201ENST00000419880 GRIN2AQ12879 1464 aa19.44■□□□□ 0.7
UBE2W-201ENST00000419880 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
UBE2W-201ENST00000419880 KIAA0556O60303 1618 aa19.41■□□□□ 0.7
UBE2W-201ENST00000419880 TONSLQ96HA7 1378 aa19.4■□□□□ 0.7
UBE2W-201ENST00000419880 DDX10Q13206 875 aaKnown RBP19.4■□□□□ 0.7
UBE2W-201ENST00000419880 MIA2Q96PC5 1412 aa19.38■□□□□ 0.69
UBE2W-201ENST00000419880 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
UBE2W-201ENST00000419880 NUP153P49790 1475 aaKnown RBP19.37■□□□□ 0.69
UBE2W-201ENST00000419880 FBLN2P98095 1184 aa19.36■□□□□ 0.69
UBE2W-201ENST00000419880 KCNH8Q96L42 1107 aa19.36■□□□□ 0.69
UBE2W-201ENST00000419880 TRIM52Q96A61 297 aa19.34■□□□□ 0.69
UBE2W-201ENST00000419880 KDM6BO15054 1643 aa19.33■□□□□ 0.69
UBE2W-201ENST00000419880 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.69
UBE2W-201ENST00000419880 RAPGEF6Q8TEU7 1601 aa19.32■□□□□ 0.68
UBE2W-201ENST00000419880 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
UBE2W-201ENST00000419880 ZNF644Q9H582 1327 aaPredicted RBP19.31■□□□□ 0.68
UBE2W-201ENST00000419880 SYNJ2O15056 1496 aa19.31■□□□□ 0.68
UBE2W-201ENST00000419880 DENND4BO75064 1496 aaPredicted RBP19.31■□□□□ 0.68
UBE2W-201ENST00000419880 GCC2Q8IWJ2 1684 aa19.31■□□□□ 0.68
UBE2W-201ENST00000419880 AKNAQ7Z591 1439 aa19.3■□□□□ 0.68
UBE2W-201ENST00000419880 PELP1Q8IZL8 1130 aaKnown RBP19.29■□□□□ 0.68
UBE2W-201ENST00000419880 CDK11AQ9UQ88 783 aaPredicted RBP19.28■□□□□ 0.68
UBE2W-201ENST00000419880 PLB1Q6P1J6 1458 aa19.27■□□□□ 0.68
UBE2W-201ENST00000419880 KDM5BQ9UGL1 1544 aa19.27■□□□□ 0.67
UBE2W-201ENST00000419880 DAPK1P53355 1430 aa19.26■□□□□ 0.67
UBE2W-201ENST00000419880 PRG4Q92954 1404 aaPredicted RBP19.26■□□□□ 0.67
UBE2W-201ENST00000419880 MPHOSPH9Q99550 1183 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms