RNA–Protein interactions for RNA: ENST00000419069.1

LINC00317-201, long intergenic non-protein coding RNA 317, humanhuman

TSL 1 (best) BASIC

Gene LINC00317, Length 612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00317-201ENST00000419069 NUBP1P53384 320 aa13.4□□□□□ -0.26
LINC00317-201ENST00000419069 AKT1S1Q96B36 256 aa13.39□□□□□ -0.27
LINC00317-201ENST00000419069 CLEC11AQ9Y240 323 aa13.39□□□□□ -0.27
LINC00317-201ENST00000419069 RNF25Q96BH1 459 aaPredicted RBP13.37□□□□□ -0.27
LINC00317-201ENST00000419069 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
LINC00317-201ENST00000419069 RIOK3O14730 519 aaKnown RBP13.35□□□□□ -0.27
LINC00317-201ENST00000419069 PRR29P0C7W0 189 aa13.35□□□□□ -0.27
LINC00317-201ENST00000419069 TPRNQ4KMQ1 711 aa13.3□□□□□ -0.28
LINC00317-201ENST00000419069 DNAJC5Q9H3Z4 198 aa13.3□□□□□ -0.28
LINC00317-201ENST00000419069 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
LINC00317-201ENST00000419069 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
LINC00317-201ENST00000419069 STK25O00506 426 aa13.25□□□□□ -0.29
LINC00317-201ENST00000419069 VGFO15240 615 aaPredicted RBP13.25□□□□□ -0.29
LINC00317-201ENST00000419069 NBR1Q14596 966 aa13.24□□□□□ -0.29
LINC00317-201ENST00000419069 MNX1P50219 401 aaPredicted RBP13.22□□□□□ -0.29
LINC00317-201ENST00000419069 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.29
LINC00317-201ENST00000419069 CHRM1P11229 460 aaPredicted RBP13.2□□□□□ -0.3
LINC00317-201ENST00000419069 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
LINC00317-201ENST00000419069 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
LINC00317-201ENST00000419069 STK24Q9Y6E0 443 aa13.14□□□□□ -0.31
LINC00317-201ENST00000419069 PYGBP11216 843 aa13.12□□□□□ -0.31
LINC00317-201ENST00000419069 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
LINC00317-201ENST00000419069 RYDENQ9NUL5 291 aaKnown RBP13.12□□□□□ -0.31
LINC00317-201ENST00000419069 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.11□□□□□ -0.31
LINC00317-201ENST00000419069 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
LINC00317-201ENST00000419069 SGIP1Q9BQI5 828 aa13.11□□□□□ -0.31
LINC00317-201ENST00000419069 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
LINC00317-201ENST00000419069 ZNF467Q7Z7K2 595 aaPredicted RBP12.97□□□□□ -0.33
LINC00317-201ENST00000419069 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
LINC00317-201ENST00000419069 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
LINC00317-201ENST00000419069 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
LINC00317-201ENST00000419069 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
LINC00317-201ENST00000419069 P3H3Q8IVL6 736 aa12.88□□□□□ -0.35
LINC00317-201ENST00000419069 PCDHB8Q9UN66 801 aa12.85□□□□□ -0.35
LINC00317-201ENST00000419069 PCDHB13Q9Y5F0 798 aa12.85□□□□□ -0.35
LINC00317-201ENST00000419069 WDR70Q9NW82 654 aa12.84□□□□□ -0.35
LINC00317-201ENST00000419069 PRKAR2AP13861 404 aaKnown RBP12.8□□□□□ -0.36
LINC00317-201ENST00000419069 PSEN1P49768 467 aa12.8□□□□□ -0.36
LINC00317-201ENST00000419069 PAK3O75914 559 aaPredicted RBP12.79□□□□□ -0.36
LINC00317-201ENST00000419069 ZNF579Q8NAF0 562 aaKnown RBP12.79□□□□□ -0.36
LINC00317-201ENST00000419069 CCDC61Q9Y6R9 512 aa12.78□□□□□ -0.36
LINC00317-201ENST00000419069 CADPS2Q86UW7 1296 aa12.76□□□□□ -0.37
LINC00317-201ENST00000419069 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
LINC00317-201ENST00000419069 KCNV2Q8TDN2 545 aa12.71□□□□□ -0.37
LINC00317-201ENST00000419069 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC00317-201ENST00000419069 IFNL1Q8IU54 200 aa12.67□□□□□ -0.38
LINC00317-201ENST00000419069 NLRP6P59044 892 aa12.66□□□□□ -0.38
LINC00317-201ENST00000419069 CABP2Q9NPB3 220 aa12.65□□□□□ -0.38
LINC00317-201ENST00000419069 EFCAB3Q8N7B9 438 aa12.64□□□□□ -0.39
LINC00317-201ENST00000419069 TULP1O00294 542 aaPredicted RBP12.63□□□□□ -0.39
LINC00317-201ENST00000419069 SOX12O15370 315 aa12.63□□□□□ -0.39
LINC00317-201ENST00000419069 MAP3K13O43283 966 aa12.63□□□□□ -0.39
LINC00317-201ENST00000419069 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
LINC00317-201ENST00000419069 LMOD2Q6P5Q4 547 aa12.61□□□□□ -0.39
LINC00317-201ENST00000419069 PPP1R37O75864 691 aa12.6□□□□□ -0.39
LINC00317-201ENST00000419069 FBXO22Q8NEZ5 403 aa12.59□□□□□ -0.39
LINC00317-201ENST00000419069 PHF8Q9UPP1 1060 aa12.59□□□□□ -0.39
LINC00317-201ENST00000419069 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC00317-201ENST00000419069 ARHGEF1Q92888 912 aaKnown RBP12.57□□□□□ -0.4
LINC00317-201ENST00000419069 E2F4Q16254 413 aa12.56□□□□□ -0.4
LINC00317-201ENST00000419069 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
LINC00317-201ENST00000419069 PIP4P2Q8N4L2 257 aa12.54□□□□□ -0.4
LINC00317-201ENST00000419069 ZRANB1Q9UGI0 708 aa12.53□□□□□ -0.4
LINC00317-201ENST00000419069 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
LINC00317-201ENST00000419069 CD44P16070 742 aaKnown RBP12.49□□□□□ -0.41
LINC00317-201ENST00000419069 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
LINC00317-201ENST00000419069 TMEM132AQ24JP5 1023 aa12.47□□□□□ -0.41
LINC00317-201ENST00000419069 PHF12Q96QT6 1004 aa12.47□□□□□ -0.41
LINC00317-201ENST00000419069 PDE4AP27815 886 aa12.45□□□□□ -0.42
LINC00317-201ENST00000419069 LARP6Q9BRS8 491 aaKnown RBP12.45□□□□□ -0.42
LINC00317-201ENST00000419069 NCKAP5LQ9HCH0 1330 aa12.43□□□□□ -0.42
LINC00317-201ENST00000419069 TMEM106CQ9BVX2 250 aa12.43□□□□□ -0.42
LINC00317-201ENST00000419069 SEMA3EO15041 775 aa12.42□□□□□ -0.42
LINC00317-201ENST00000419069 TESPA1A2RU30 521 aaPredicted RBP12.41□□□□□ -0.42
LINC00317-201ENST00000419069 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
LINC00317-201ENST00000419069 MKRN3Q13064 507 aaKnown RBP12.39□□□□□ -0.43
LINC00317-201ENST00000419069 ZC3H15Q8WU90 426 aaKnown RBP12.39□□□□□ -0.43
LINC00317-201ENST00000419069 DDX27Q96GQ7 796 aaKnown RBP12.39□□□□□ -0.43
LINC00317-201ENST00000419069 TIMELESSQ9UNS1 1208 aa12.39□□□□□ -0.43
LINC00317-201ENST00000419069 MFSD10Q14728 455 aa12.38□□□□□ -0.43
LINC00317-201ENST00000419069 SMYD5Q6GMV2 418 aa12.38□□□□□ -0.43
LINC00317-201ENST00000419069 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
LINC00317-201ENST00000419069 CRISPLD2Q9H0B8 497 aa12.36□□□□□ -0.43
LINC00317-201ENST00000419069 MS4A3Q96HJ5 214 aa12.33□□□□□ -0.44
LINC00317-201ENST00000419069 BRPF1P55201 1214 aaPredicted RBP12.3□□□□□ -0.44
LINC00317-201ENST00000419069 TRPC6Q9Y210 931 aa12.29□□□□□ -0.44
LINC00317-201ENST00000419069 ARIH1Q9Y4X5 557 aaPredicted RBP12.29□□□□□ -0.44
LINC00317-201ENST00000419069 NEUROD2Q15784 382 aa12.28□□□□□ -0.44
LINC00317-201ENST00000419069 SLC24A3Q9HC58 644 aa12.28□□□□□ -0.44
LINC00317-201ENST00000419069 CAMK2BQ13554 666 aa12.27□□□□□ -0.45
LINC00317-201ENST00000419069 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC00317-201ENST00000419069 TIE1P35590 1138 aa12.25□□□□□ -0.45
LINC00317-201ENST00000419069 PPP1R15BQ5SWA1 713 aa12.23□□□□□ -0.45
LINC00317-201ENST00000419069 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
LINC00317-201ENST00000419069 TTLL13PA6NNM8 815 aa12.22□□□□□ -0.45
LINC00317-201ENST00000419069 ZMYND10O75800 440 aa12.22□□□□□ -0.45
LINC00317-201ENST00000419069 C14orf37Q86TY3 774 aa12.2□□□□□ -0.46
LINC00317-201ENST00000419069 GPHNQ9NQX3 736 aaPredicted RBP12.2□□□□□ -0.46
LINC00317-201ENST00000419069 BARGINQ6ZT62 677 aa12.16□□□□□ -0.46
LINC00317-201ENST00000419069 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms