RNA–Protein interactions for RNA: ENST00000418664.2

DSP-202, Transcript of desmoplakin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DSP, Length 7,812 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-202ENST00000418664 APPP05067 770 aa15.6■□□□□ 0.09
DSP-202ENST00000418664 PATL2C9JE40 543 aaKnown RBP15.6■□□□□ 0.09
DSP-202ENST00000418664 ANO8Q9HCE9 1232 aaPredicted RBP15.57■□□□□ 0.08
DSP-202ENST00000418664 STAG3Q9UJ98 1225 aa15.57■□□□□ 0.08
DSP-202ENST00000418664 MYH16Q9H6N6 1097 aa15.57■□□□□ 0.08
DSP-202ENST00000418664 ESF1Q9H501 851 aaKnown RBP15.56■□□□□ 0.08
DSP-202ENST00000418664 A0A0U1RQG5 324 aaPredicted RBP15.56■□□□□ 0.08
DSP-202ENST00000418664 DDRGK1Q96HY6 314 aa15.56■□□□□ 0.08
DSP-202ENST00000418664 TAF7LQ5H9L4 462 aa15.56■□□□□ 0.08
DSP-202ENST00000418664 MSNP26038 577 aaKnown RBP15.55■□□□□ 0.08
DSP-202ENST00000418664 PNNQ9H307 717 aaKnown RBP15.54■□□□□ 0.08
DSP-202ENST00000418664 PTMSP20962 102 aa15.54■□□□□ 0.08
DSP-202ENST00000418664 NPHP1O15259 732 aa15.54■□□□□ 0.08
DSP-202ENST00000418664 IRX6P78412 446 aaPredicted RBP15.53■□□□□ 0.08
DSP-202ENST00000418664 DRC7Q8IY82 874 aa15.52■□□□□ 0.08
DSP-202ENST00000418664 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.08
DSP-202ENST00000418664 NRDCO43847 1150 aa15.52■□□□□ 0.07
DSP-202ENST00000418664 SETQ01105 290 aaPredicted RBP15.52■□□□□ 0.07
DSP-202ENST00000418664 CHGAP10645 457 aaKnown RBP15.51■□□□□ 0.07
DSP-202ENST00000418664 FAM9BQ8IZU0 186 aa15.5■□□□□ 0.07
DSP-202ENST00000418664 HNRNPUQ00839 825 aaKnown RBP eCLIP15.5■□□□□ 0.07
DSP-202ENST00000418664 GOLGA6L1Q8N7Z2 621 aa15.48■□□□□ 0.07
DSP-202ENST00000418664 NAP1L2Q9ULW6 460 aaPredicted RBP15.48■□□□□ 0.07
DSP-202ENST00000418664 ISY1Q9ULR0 285 aaKnown RBP15.46■□□□□ 0.07
DSP-202ENST00000418664 L1TD1Q5T7N2 865 aaKnown RBP15.45■□□□□ 0.06
DSP-202ENST00000418664 C14orf37Q86TY3 774 aa15.44■□□□□ 0.06
DSP-202ENST00000418664 KIAA2012Q0VF49 1180 aa15.42■□□□□ 0.06
DSP-202ENST00000418664 MEX3CQ5U5Q3 659 aaKnown RBP15.42■□□□□ 0.06
DSP-202ENST00000418664 LOC105371045A0A1W2PR82 267 aa15.39■□□□□ 0.05
DSP-202ENST00000418664 SENP3Q9H4L4 574 aaPredicted RBP15.38■□□□□ 0.05
DSP-202ENST00000418664 HAP1P54257 671 aaPredicted RBP15.35■□□□□ 0.05
DSP-202ENST00000418664 VSIG10Q8N0Z9 540 aa15.35■□□□□ 0.05
DSP-202ENST00000418664 FGD1P98174 961 aa15.35■□□□□ 0.05
DSP-202ENST00000418664 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
DSP-202ENST00000418664 FBLN2P98095 1184 aa15.32■□□□□ 0.04
DSP-202ENST00000418664 CASC1Q6TDU7 716 aa15.32■□□□□ 0.04
DSP-202ENST00000418664 DEKP35659 375 aaKnown RBP15.31■□□□□ 0.04
DSP-202ENST00000418664 GOLGA2Q08379 1002 aa15.31■□□□□ 0.04
DSP-202ENST00000418664 HSP90AB1P08238 724 aaKnown RBP15.3■□□□□ 0.04
DSP-202ENST00000418664 GOLGA6L4A6NEF3 574 aa15.3■□□□□ 0.04
DSP-202ENST00000418664 ARID3CA6NKF2 412 aa15.29■□□□□ 0.04
DSP-202ENST00000418664 RRP12Q5JTH9 1297 aaKnown RBP15.29■□□□□ 0.04
DSP-202ENST00000418664 WWC1Q8IX03 1113 aa15.29■□□□□ 0.04
DSP-202ENST00000418664 STK11IPQ8N1F8 1099 aa15.29■□□□□ 0.04
DSP-202ENST00000418664 WDR43Q15061 677 aaKnown RBP eCLIP15.28■□□□□ 0.041e-6■□□□□ 10.9
DSP-202ENST00000418664 SPRYD3Q8NCJ5 442 aa15.24■□□□□ 0.03
DSP-202ENST00000418664 HSP90AA2PQ14568 343 aaPredicted RBP15.22■□□□□ 0.03
DSP-202ENST00000418664 ZNF777Q9ULD5 760 aaPredicted RBP15.22■□□□□ 0.03
DSP-202ENST00000418664 ZNF771Q7L3S4 317 aaPredicted RBP15.22■□□□□ 0.03
DSP-202ENST00000418664 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
DSP-202ENST00000418664 KCNJ4P48050 445 aa15.21■□□□□ 0.03
DSP-202ENST00000418664 NOP58Q9Y2X3 529 aaKnown RBP15.21■□□□□ 0.02
DSP-202ENST00000418664 GNL2Q13823 731 aaKnown RBP15.18■□□□□ 0.02
DSP-202ENST00000418664 PLCD4Q9BRC7 762 aa15.16■□□□□ 0.02
DSP-202ENST00000418664 OS9Q13438 667 aaPredicted RBP15.15■□□□□ 0.02
DSP-202ENST00000418664 PODXL2Q9NZ53 605 aa15.15■□□□□ 0.02
DSP-202ENST00000418664 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
DSP-202ENST00000418664 GZF1Q9H116 711 aaPredicted RBP15.14■□□□□ 0.01
DSP-202ENST00000418664 CREBRFQ8IUR6 639 aa15.13■□□□□ 0.01
DSP-202ENST00000418664 CEP89Q96ST8 783 aa15.13■□□□□ 0.01
DSP-202ENST00000418664 DDX10Q13206 875 aaKnown RBP15.13■□□□□ 0.01
DSP-202ENST00000418664 USP35Q9P2H5 1018 aa15.12■□□□□ 0.01
DSP-202ENST00000418664 SENP3-EIF4A1A0A087X0R7 540 aa15.11■□□□□ 0.01
DSP-202ENST00000418664 MAP7D2Q96T17 732 aa15.08■□□□□ 0
DSP-202ENST00000418664 RGS3P49796 1198 aa15.08■□□□□ 0
DSP-202ENST00000418664 CCAR2Q8N163 923 aaKnown RBP15.06■□□□□ 0
DSP-202ENST00000418664 FTSJ3Q8IY81 847 aaKnown RBP15.05■□□□□ -0
DSP-202ENST00000418664 HSCBQ8IWL3 235 aa15.05■□□□□ -0
DSP-202ENST00000418664 TIMELESSQ9UNS1 1208 aa15.04■□□□□ -0
DSP-202ENST00000418664 MRS2Q9HD23 443 aa15.03■□□□□ -0
DSP-202ENST00000418664 LMOD2Q6P5Q4 547 aa15.02■□□□□ -0
DSP-202ENST00000418664 HTATSF1O43719 755 aaKnown RBP15.02□□□□□ -0.01
DSP-202ENST00000418664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.012e-13■■■□□ 14.7
DSP-202ENST00000418664 HSP90AB3PQ58FF7 597 aa15□□□□□ -0.01
DSP-202ENST00000418664 TPM4P67936 248 aa14.99□□□□□ -0.01
DSP-202ENST00000418664 VPS53Q5VIR6 699 aa14.99□□□□□ -0.01
DSP-202ENST00000418664 TPM3P06753 285 aa14.99□□□□□ -0.01
DSP-202ENST00000418664 BCCIPQ9P287 314 aaKnown RBP eCLIP14.97□□□□□ -0.01
DSP-202ENST00000418664 HSP90B1P14625 803 aaKnown RBP14.96□□□□□ -0.01
DSP-202ENST00000418664 NEFHP12036 1026 aa14.96□□□□□ -0.01
DSP-202ENST00000418664 NOM1Q5C9Z4 860 aaKnown RBP14.95□□□□□ -0.02
DSP-202ENST00000418664 KDM2AQ9Y2K7 1162 aa14.95□□□□□ -0.02
DSP-202ENST00000418664 DHX37Q8IY37 1157 aaKnown RBP14.94□□□□□ -0.02
DSP-202ENST00000418664 RASSF8Q8NHQ8 419 aa14.94□□□□□ -0.02
DSP-202ENST00000418664 GPS2Q13227 327 aa14.94□□□□□ -0.02
DSP-202ENST00000418664 ZNF526Q8TF50 670 aaPredicted RBP14.93□□□□□ -0.02
DSP-202ENST00000418664 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.93□□□□□ -0.02
DSP-202ENST00000418664 PES1O00541 588 aaKnown RBP14.93□□□□□ -0.02
DSP-202ENST00000418664 RDXP35241 583 aaKnown RBP14.93□□□□□ -0.02
DSP-202ENST00000418664 AK7Q96M32 723 aa14.92□□□□□ -0.02
DSP-202ENST00000418664 P3H3Q8IVL6 736 aa14.92□□□□□ -0.02
DSP-202ENST00000418664 HMMRO75330 724 aa14.92□□□□□ -0.02
DSP-202ENST00000418664 CCDC191Q8NCU4 936 aa14.92□□□□□ -0.02
DSP-202ENST00000418664 TEX35Q5T0J7 233 aa14.91□□□□□ -0.02
DSP-202ENST00000418664 GOLGA6L3A6NEY3 463 aa14.9□□□□□ -0.02
DSP-202ENST00000418664 PKNOX2Q96KN3 472 aa14.89□□□□□ -0.03
DSP-202ENST00000418664 PPP1R15AO75807 674 aaPredicted RBP14.88□□□□□ -0.03
DSP-202ENST00000418664 ZNF592Q92610 1267 aa14.88□□□□□ -0.03
DSP-202ENST00000418664 RSPH6AQ9H0K4 717 aa14.88□□□□□ -0.03
DSP-202ENST00000418664 MAPK8IP2Q13387 824 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms