RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
NIF3L1-206ENST00000416651 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
NIF3L1-206ENST00000416651 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
NIF3L1-206ENST00000416651 CHRDL2Q6WN34 429 aa16.83■□□□□ 0.28
NIF3L1-206ENST00000416651 TARBP1Q13395 1621 aaKnown RBP16.82■□□□□ 0.28
NIF3L1-206ENST00000416651 CCDC88BA6NC98 1476 aa16.78■□□□□ 0.28
NIF3L1-206ENST00000416651 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
NIF3L1-206ENST00000416651 DNMBPQ6XZF7 1577 aa16.75■□□□□ 0.27
NIF3L1-206ENST00000416651 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
NIF3L1-206ENST00000416651 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
NIF3L1-206ENST00000416651 SLC4A1APQ9BWU0 796 aaKnown RBP16.71■□□□□ 0.27
NIF3L1-206ENST00000416651 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
NIF3L1-206ENST00000416651 SNAPC4Q5SXM2 1469 aa16.69■□□□□ 0.26
NIF3L1-206ENST00000416651 ABCC8Q09428 1581 aa16.65■□□□□ 0.26
NIF3L1-206ENST00000416651 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
NIF3L1-206ENST00000416651 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
NIF3L1-206ENST00000416651 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
NIF3L1-206ENST00000416651 SOGA1O94964 1423 aa16.61■□□□□ 0.25
NIF3L1-206ENST00000416651 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
NIF3L1-206ENST00000416651 ILDR1Q86SU0 546 aaPredicted RBP16.59■□□□□ 0.25
NIF3L1-206ENST00000416651 SYNJ1O43426 1573 aa16.59■□□□□ 0.25
NIF3L1-206ENST00000416651 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
NIF3L1-206ENST00000416651 AKT1S1Q96B36 256 aa16.56■□□□□ 0.24
NIF3L1-206ENST00000416651 ZBTB12Q9Y330 459 aaPredicted RBP16.53■□□□□ 0.24
NIF3L1-206ENST00000416651 FGD5Q6ZNL6 1462 aa16.53■□□□□ 0.24
NIF3L1-206ENST00000416651 SYNJ2O15056 1496 aa16.5■□□□□ 0.23
NIF3L1-206ENST00000416651 MAGI1Q96QZ7 1491 aaPredicted RBP16.5■□□□□ 0.23
NIF3L1-206ENST00000416651 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
NIF3L1-206ENST00000416651 CUX1P39880 1505 aa16.45■□□□□ 0.22
NIF3L1-206ENST00000416651 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
NIF3L1-206ENST00000416651 KDM4FA0A1W2PPD8 638 aa16.45■□□□□ 0.22
NIF3L1-206ENST00000416651 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
NIF3L1-206ENST00000416651 PBRM1Q86U86 1689 aa16.41■□□□□ 0.22
NIF3L1-206ENST00000416651 WDR97A6NE52 1622 aa16.41■□□□□ 0.22
NIF3L1-206ENST00000416651 SP7Q8TDD2 431 aaPredicted RBP16.39■□□□□ 0.21
NIF3L1-206ENST00000416651 CEP170Q5SW79 1584 aa16.38■□□□□ 0.21
NIF3L1-206ENST00000416651 PIP4P2Q8N4L2 257 aa16.34■□□□□ 0.21
NIF3L1-206ENST00000416651 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
NIF3L1-206ENST00000416651 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
NIF3L1-206ENST00000416651 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
NIF3L1-206ENST00000416651 NUP160Q12769 1436 aa16.28■□□□□ 0.2
NIF3L1-206ENST00000416651 SHROOM2Q13796 1616 aa16.27■□□□□ 0.19
NIF3L1-206ENST00000416651 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
NIF3L1-206ENST00000416651 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
NIF3L1-206ENST00000416651 ZBTB22O15209 634 aa16.23■□□□□ 0.19
NIF3L1-206ENST00000416651 ABCC10Q5T3U5 1492 aa16.22■□□□□ 0.19
NIF3L1-206ENST00000416651 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
NIF3L1-206ENST00000416651 PRG4Q92954 1404 aaPredicted RBP16.19■□□□□ 0.18
NIF3L1-206ENST00000416651 DIP2BQ9P265 1576 aa16.19■□□□□ 0.18
NIF3L1-206ENST00000416651 HAX1O00165 279 aa16.19■□□□□ 0.18
NIF3L1-206ENST00000416651 KDM6BO15054 1643 aa16.19■□□□□ 0.18
NIF3L1-206ENST00000416651 FXR2P51116 673 aaKnown RBP eCLIP16.18■□□□□ 0.18
NIF3L1-206ENST00000416651 TSPOAP1O95153 1857 aa16.18■□□□□ 0.18
NIF3L1-206ENST00000416651 JPH4Q96JJ6 628 aa16.13■□□□□ 0.17
NIF3L1-206ENST00000416651 ADCY10Q96PN6 1610 aa16.12■□□□□ 0.17
NIF3L1-206ENST00000416651 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
NIF3L1-206ENST00000416651 MAPKBP1O60336 1514 aa16.09■□□□□ 0.17
NIF3L1-206ENST00000416651 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
NIF3L1-206ENST00000416651 ADGRL1O94910 1474 aa16.08■□□□□ 0.16
NIF3L1-206ENST00000416651 HECW2Q9P2P5 1572 aa16.07■□□□□ 0.16
NIF3L1-206ENST00000416651 NPM1P06748 294 aaKnown RBP eCLIP16.06■□□□□ 0.16
NIF3L1-206ENST00000416651 WRNQ14191 1432 aaPredicted RBP eCLIP16.02■□□□□ 0.15
NIF3L1-206ENST00000416651 RUSC2Q8N2Y8 1516 aa16.01■□□□□ 0.15
NIF3L1-206ENST00000416651 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
NIF3L1-206ENST00000416651 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
NIF3L1-206ENST00000416651 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
NIF3L1-206ENST00000416651 COL17A1Q9UMD9 1497 aaPredicted RBP16.01■□□□□ 0.15
NIF3L1-206ENST00000416651 PPRC1Q5VV67 1664 aaKnown RBP15.99■□□□□ 0.15
NIF3L1-206ENST00000416651 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
NIF3L1-206ENST00000416651 TTBK1Q5TCY1 1321 aaPredicted RBP15.97■□□□□ 0.15
NIF3L1-206ENST00000416651 EVX2Q03828 476 aa15.94■□□□□ 0.14
NIF3L1-206ENST00000416651 BIVM-ERCC5R4GMW8 1640 aa15.93■□□□□ 0.14
NIF3L1-206ENST00000416651 TOP2BQ02880 1626 aa15.92■□□□□ 0.14
NIF3L1-206ENST00000416651 FBXO41Q8TF61 875 aa15.87■□□□□ 0.13
NIF3L1-206ENST00000416651 ASXL2Q76L83 1435 aa15.86■□□□□ 0.13
NIF3L1-206ENST00000416651 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
NIF3L1-206ENST00000416651 PRKAR2AP13861 404 aaKnown RBP15.83■□□□□ 0.12
NIF3L1-206ENST00000416651 SPDYE1Q8NFV5 336 aaPredicted RBP15.83■□□□□ 0.12
NIF3L1-206ENST00000416651 PTPRGP23470 1445 aa15.83■□□□□ 0.12
NIF3L1-206ENST00000416651 KIAA0586Q9BVV6 1533 aa15.82■□□□□ 0.12
NIF3L1-206ENST00000416651 GLI2P10070 1586 aa15.82■□□□□ 0.12
NIF3L1-206ENST00000416651 MKRN4PQ13434 485 aaPredicted RBP15.81■□□□□ 0.12
NIF3L1-206ENST00000416651 CUL7Q14999 1698 aa15.81■□□□□ 0.12
NIF3L1-206ENST00000416651 ABCC2Q92887 1545 aa15.8■□□□□ 0.12
NIF3L1-206ENST00000416651 ZNF692Q9BU19 519 aaPredicted RBP15.78■□□□□ 0.12
NIF3L1-206ENST00000416651 EPRSP07814 1512 aaKnown RBP15.76■□□□□ 0.11
NIF3L1-206ENST00000416651 PLB1Q6P1J6 1458 aa15.76■□□□□ 0.11
NIF3L1-206ENST00000416651 MAP3K4Q9Y6R4 1608 aa15.76■□□□□ 0.11
NIF3L1-206ENST00000416651 IGF1RP08069 1367 aa15.75■□□□□ 0.11
NIF3L1-206ENST00000416651 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
NIF3L1-206ENST00000416651 SSUH2Q9Y2M2 353 aa15.73■□□□□ 0.11
NIF3L1-206ENST00000416651 TNIKQ9UKE5 1360 aa15.72■□□□□ 0.11
NIF3L1-206ENST00000416651 ILDR2Q71H61 639 aa15.68■□□□□ 0.1
NIF3L1-206ENST00000416651 KIF21BO75037 1637 aa15.68■□□□□ 0.1
NIF3L1-206ENST00000416651 UACAQ9BZF9 1416 aa15.68■□□□□ 0.1
NIF3L1-206ENST00000416651 UHRF1BP1LA0JNW5 1464 aa15.67■□□□□ 0.1
NIF3L1-206ENST00000416651 C19orf67A6NJJ6 358 aa15.67■□□□□ 0.1
NIF3L1-206ENST00000416651 LMTK3Q96Q04 1460 aa15.65■□□□□ 0.1
NIF3L1-206ENST00000416651 ZCCHC11Q5TAX3 1644 aaKnown RBP15.65■□□□□ 0.1
NIF3L1-206ENST00000416651 KDM5BQ9UGL1 1544 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms