RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 HAX1O00165 279 aa10.84□□□□□ -0.67
HDAC8-211ENST00000415409 SSUH2Q9Y2M2 353 aa10.84□□□□□ -0.67
HDAC8-211ENST00000415409 CADPSQ9ULU8 1353 aa10.84□□□□□ -0.67
HDAC8-211ENST00000415409 CFTRP13569 1480 aa10.84□□□□□ -0.67
HDAC8-211ENST00000415409 WRNQ14191 1432 aaPredicted RBP eCLIP10.84□□□□□ -0.67
HDAC8-211ENST00000415409 SP7Q8TDD2 431 aaPredicted RBP10.82□□□□□ -0.68
HDAC8-211ENST00000415409 ABCC8Q09428 1581 aa10.82□□□□□ -0.68
HDAC8-211ENST00000415409 FAM9AQ8IZU1 332 aaPredicted RBP10.8□□□□□ -0.68
HDAC8-211ENST00000415409 ERCC6Q03468 1493 aa10.78□□□□□ -0.68
HDAC8-211ENST00000415409 LOC105371045A0A1W2PR82 267 aa10.76□□□□□ -0.69
HDAC8-211ENST00000415409 PRKAR2AP13861 404 aaKnown RBP10.76□□□□□ -0.69
HDAC8-211ENST00000415409 LAMC3Q9Y6N6 1575 aa10.74□□□□□ -0.69
HDAC8-211ENST00000415409 EEA1Q15075 1411 aa10.73□□□□□ -0.69
HDAC8-211ENST00000415409 SYNJ1O43426 1573 aa10.69□□□□□ -0.7
HDAC8-211ENST00000415409 PRR29P0C7W0 189 aa10.69□□□□□ -0.7
HDAC8-211ENST00000415409 FANCD2Q9BXW9 1451 aa10.68□□□□□ -0.7
HDAC8-211ENST00000415409 SOGA1O94964 1423 aa10.68□□□□□ -0.7
HDAC8-211ENST00000415409 NESP48681 1621 aa10.68□□□□□ -0.7
HDAC8-211ENST00000415409 THOC2Q8NI27 1593 aaKnown RBP10.68□□□□□ -0.7
HDAC8-211ENST00000415409 PDS5BQ9NTI5 1447 aa10.67□□□□□ -0.7
HDAC8-211ENST00000415409 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
HDAC8-211ENST00000415409 TOP2BQ02880 1626 aa10.66□□□□□ -0.7
HDAC8-211ENST00000415409 CUX1P39880 1505 aa10.64□□□□□ -0.71
HDAC8-211ENST00000415409 CHADLQ6NUI6 762 aa10.64□□□□□ -0.71
HDAC8-211ENST00000415409 CEP164Q9UPV0 1460 aa10.61□□□□□ -0.71
HDAC8-211ENST00000415409 BIVM-ERCC5R4GMW8 1640 aa10.61□□□□□ -0.71
HDAC8-211ENST00000415409 RUSC2Q8N2Y8 1516 aa10.6□□□□□ -0.71
HDAC8-211ENST00000415409 EVX2Q03828 476 aa10.6□□□□□ -0.71
HDAC8-211ENST00000415409 KIF27Q86VH2 1401 aa10.58□□□□□ -0.72
HDAC8-211ENST00000415409 PRDM2Q13029 1718 aa10.56□□□□□ -0.72
HDAC8-211ENST00000415409 UBTFP17480 764 aaKnown RBP10.56□□□□□ -0.72
HDAC8-211ENST00000415409 DNMBPQ6XZF7 1577 aa10.56□□□□□ -0.72
HDAC8-211ENST00000415409 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
HDAC8-211ENST00000415409 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
HDAC8-211ENST00000415409 TNIKQ9UKE5 1360 aa10.54□□□□□ -0.72
HDAC8-211ENST00000415409 TOPBP1Q92547 1522 aa10.54□□□□□ -0.72
HDAC8-211ENST00000415409 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
HDAC8-211ENST00000415409 SPDYE4A6NLX3 237 aa10.53□□□□□ -0.72
HDAC8-211ENST00000415409 WDR62O43379 1518 aa10.52□□□□□ -0.73
HDAC8-211ENST00000415409 MRC2Q9UBG0 1479 aa10.51□□□□□ -0.73
HDAC8-211ENST00000415409 URB2Q14146 1524 aaKnown RBP10.51□□□□□ -0.73
HDAC8-211ENST00000415409 POLA1P09884 1462 aaPredicted RBP10.49□□□□□ -0.73
HDAC8-211ENST00000415409 STAG3Q9UJ98 1225 aa10.48□□□□□ -0.73
HDAC8-211ENST00000415409 IGF1RP08069 1367 aa10.48□□□□□ -0.73
HDAC8-211ENST00000415409 PRXQ9BXM0 1461 aa10.48□□□□□ -0.73
HDAC8-211ENST00000415409 ABCA10Q8WWZ4 1543 aa10.48□□□□□ -0.73
HDAC8-211ENST00000415409 KIF21BO75037 1637 aa10.47□□□□□ -0.73
HDAC8-211ENST00000415409 RAD54L2Q9Y4B4 1467 aa10.47□□□□□ -0.73
HDAC8-211ENST00000415409 FARP1Q9Y4F1 1045 aaPredicted RBP10.46□□□□□ -0.73
HDAC8-211ENST00000415409 CEP162Q5TB80 1403 aa10.46□□□□□ -0.74
HDAC8-211ENST00000415409 RAPGEF2Q9Y4G8 1499 aa10.45□□□□□ -0.74
HDAC8-211ENST00000415409 CARMIL1Q5VZK9 1371 aa10.44□□□□□ -0.74
HDAC8-211ENST00000415409 ERICH3Q5RHP9 1530 aa10.43□□□□□ -0.74
HDAC8-211ENST00000415409 CD44P16070 742 aaKnown RBP10.43□□□□□ -0.74
HDAC8-211ENST00000415409 TDRD9Q8NDG6 1382 aaKnown RBP10.41□□□□□ -0.74
HDAC8-211ENST00000415409 GABBR2O75899 941 aa10.41□□□□□ -0.74
HDAC8-211ENST00000415409 CLIP1P30622 1438 aa10.4□□□□□ -0.75
HDAC8-211ENST00000415409 IFT140Q96RY7 1462 aa10.39□□□□□ -0.75
HDAC8-211ENST00000415409 GAPVD1Q14C86 1478 aa10.38□□□□□ -0.75
HDAC8-211ENST00000415409 RANGAP1P46060 587 aaPredicted RBP10.36□□□□□ -0.75
HDAC8-211ENST00000415409 CREBZFQ9NS37 354 aa10.35□□□□□ -0.75
HDAC8-211ENST00000415409 TRIM26Q12899 539 aaPredicted RBP10.33□□□□□ -0.76
HDAC8-211ENST00000415409 TARBP1Q13395 1621 aaKnown RBP10.33□□□□□ -0.76
HDAC8-211ENST00000415409 AQRO60306 1485 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC8-211ENST00000415409 GRIN2BQ13224 1484 aa10.31□□□□□ -0.76
HDAC8-211ENST00000415409 PCGF6Q9BYE7 350 aa10.31□□□□□ -0.76
HDAC8-211ENST00000415409 ABCA5Q8WWZ7 1642 aa10.3□□□□□ -0.76
HDAC8-211ENST00000415409 CUL7Q14999 1698 aa10.29□□□□□ -0.76
HDAC8-211ENST00000415409 ZRANB1Q9UGI0 708 aa10.29□□□□□ -0.76
HDAC8-211ENST00000415409 FHAD1B1AJZ9 1412 aa10.29□□□□□ -0.76
HDAC8-211ENST00000415409 VPS8Q8N3P4 1428 aa10.29□□□□□ -0.76
HDAC8-211ENST00000415409 WDR97A6NE52 1622 aa10.29□□□□□ -0.76
HDAC8-211ENST00000415409 ZNF608Q9ULD9 1512 aaPredicted RBP10.27□□□□□ -0.77
HDAC8-211ENST00000415409 PAK3O75914 559 aaPredicted RBP10.26□□□□□ -0.77
HDAC8-211ENST00000415409 NPM1P06748 294 aaKnown RBP eCLIP10.25□□□□□ -0.77
HDAC8-211ENST00000415409 CLCN6P51797 869 aa10.25□□□□□ -0.77
HDAC8-211ENST00000415409 PPARGC1BQ86YN6 1023 aaKnown RBP10.25□□□□□ -0.77
HDAC8-211ENST00000415409 ARAP1Q96P48 1450 aa10.23□□□□□ -0.77
HDAC8-211ENST00000415409 ARHGAP35Q9NRY4 1499 aa10.23□□□□□ -0.77
HDAC8-211ENST00000415409 ZNF579Q8NAF0 562 aaKnown RBP10.22□□□□□ -0.77
HDAC8-211ENST00000415409 CHMP7Q8WUX9 453 aaPredicted RBP10.22□□□□□ -0.77
HDAC8-211ENST00000415409 DCBLD2Q96PD2 775 aa10.21□□□□□ -0.77
HDAC8-211ENST00000415409 SNAPC4Q5SXM2 1469 aa10.21□□□□□ -0.78
HDAC8-211ENST00000415409 RIMBP3CA6NJZ7 1639 aa10.21□□□□□ -0.78
HDAC8-211ENST00000415409 RIMBP3BA6NNM3 1639 aa10.21□□□□□ -0.78
HDAC8-211ENST00000415409 RIMBP3Q9UFD9 1639 aa10.21□□□□□ -0.78
HDAC8-211ENST00000415409 ADAMTS12P58397 1594 aa10.2□□□□□ -0.78
HDAC8-211ENST00000415409 MAGI1Q96QZ7 1491 aaPredicted RBP10.2□□□□□ -0.78
HDAC8-211ENST00000415409 EIF4G3O43432 1585 aaKnown RBP10.19□□□□□ -0.78
HDAC8-211ENST00000415409 P3H3Q8IVL6 736 aa10.19□□□□□ -0.78
HDAC8-211ENST00000415409 CHD1O14646 1710 aa10.19□□□□□ -0.78
HDAC8-211ENST00000415409 EFCAB5A4FU69 1503 aa10.17□□□□□ -0.78
HDAC8-211ENST00000415409 SYNJ2O15056 1496 aa10.17□□□□□ -0.78
HDAC8-211ENST00000415409 TTBK1Q5TCY1 1321 aaPredicted RBP10.17□□□□□ -0.78
HDAC8-211ENST00000415409 LHX8Q68G74 356 aa10.16□□□□□ -0.78
HDAC8-211ENST00000415409 PROM2Q8N271 834 aa10.16□□□□□ -0.78
HDAC8-211ENST00000415409 PBRM1Q86U86 1689 aa10.15□□□□□ -0.78
HDAC8-211ENST00000415409 GRIN2AQ12879 1464 aa10.15□□□□□ -0.78
HDAC8-211ENST00000415409 FHOD3Q2V2M9 1422 aa10.15□□□□□ -0.79
HDAC8-211ENST00000415409 FMN1Q68DA7 1419 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms