RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 TSHZ2Q9NRE2 1034 aa15.23■□□□□ 0.03
SMC4P1-201ENST00000414479 NUBP1P53384 320 aa15.22■□□□□ 0.03
SMC4P1-201ENST00000414479 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
SMC4P1-201ENST00000414479 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
SMC4P1-201ENST00000414479 RIOK3O14730 519 aaKnown RBP15.2■□□□□ 0.02
SMC4P1-201ENST00000414479 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
SMC4P1-201ENST00000414479 RNF25Q96BH1 459 aaPredicted RBP15.15■□□□□ 0.02
SMC4P1-201ENST00000414479 VGFO15240 615 aaPredicted RBP15.12■□□□□ 0.01
SMC4P1-201ENST00000414479 NBR1Q14596 966 aa15.11■□□□□ 0.01
SMC4P1-201ENST00000414479 PRKCSHP14314 528 aaPredicted RBP15.09■□□□□ 0.01
SMC4P1-201ENST00000414479 CREBZFQ9NS37 354 aa15.09■□□□□ 0.01
SMC4P1-201ENST00000414479 RYDENQ9NUL5 291 aaKnown RBP15.09■□□□□ 0.01
SMC4P1-201ENST00000414479 STK25O00506 426 aa15.08■□□□□ 0
SMC4P1-201ENST00000414479 TPRNQ4KMQ1 711 aa15.08■□□□□ 0
SMC4P1-201ENST00000414479 CHRM1P11229 460 aaPredicted RBP15.06■□□□□ 0
SMC4P1-201ENST00000414479 REM2Q8IYK8 340 aaPredicted RBP15.05■□□□□ -0
SMC4P1-201ENST00000414479 MNX1P50219 401 aaPredicted RBP15□□□□□ -0.01
SMC4P1-201ENST00000414479 SGIP1Q9BQI5 828 aa14.98□□□□□ -0.01
SMC4P1-201ENST00000414479 GTPBP6O43824 516 aaPredicted RBP14.95□□□□□ -0.02
SMC4P1-201ENST00000414479 NKX1-1Q15270 411 aaPredicted RBP14.95□□□□□ -0.02
SMC4P1-201ENST00000414479 RASEFQ8IZ41 740 aa14.95□□□□□ -0.02
SMC4P1-201ENST00000414479 STK24Q9Y6E0 443 aa14.93□□□□□ -0.02
SMC4P1-201ENST00000414479 BCL11BQ9C0K0 894 aaPredicted RBP14.91□□□□□ -0.02
SMC4P1-201ENST00000414479 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.89□□□□□ -0.03
SMC4P1-201ENST00000414479 ZFP91Q96JP5 570 aaPredicted RBP14.89□□□□□ -0.03
SMC4P1-201ENST00000414479 PYGBP11216 843 aa14.88□□□□□ -0.03
SMC4P1-201ENST00000414479 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
SMC4P1-201ENST00000414479 ZNF467Q7Z7K2 595 aaPredicted RBP14.83□□□□□ -0.04
SMC4P1-201ENST00000414479 P3H3Q8IVL6 736 aa14.77□□□□□ -0.05
SMC4P1-201ENST00000414479 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
SMC4P1-201ENST00000414479 PDAP1Q13442 181 aaKnown RBP14.7□□□□□ -0.06
SMC4P1-201ENST00000414479 WDR70Q9NW82 654 aa14.67□□□□□ -0.06
SMC4P1-201ENST00000414479 FARP1Q9Y4F1 1045 aaPredicted RBP14.66□□□□□ -0.06
SMC4P1-201ENST00000414479 PAK3O75914 559 aaPredicted RBP14.63□□□□□ -0.07
SMC4P1-201ENST00000414479 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
SMC4P1-201ENST00000414479 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
SMC4P1-201ENST00000414479 PSEN1P49768 467 aa14.55□□□□□ -0.08
SMC4P1-201ENST00000414479 PRKAR2AP13861 404 aaKnown RBP14.54□□□□□ -0.08
SMC4P1-201ENST00000414479 PCDHB8Q9UN66 801 aa14.54□□□□□ -0.08
SMC4P1-201ENST00000414479 PCDHB13Q9Y5F0 798 aa14.54□□□□□ -0.08
SMC4P1-201ENST00000414479 CCDC61Q9Y6R9 512 aa14.54□□□□□ -0.08
SMC4P1-201ENST00000414479 TULP1O00294 542 aaPredicted RBP14.51□□□□□ -0.09
SMC4P1-201ENST00000414479 MFRPQ9BY79 579 aa14.45□□□□□ -0.1
SMC4P1-201ENST00000414479 NLRP6P59044 892 aa14.44□□□□□ -0.1
SMC4P1-201ENST00000414479 KCNV2Q8TDN2 545 aa14.43□□□□□ -0.1
SMC4P1-201ENST00000414479 SOX12O15370 315 aa14.42□□□□□ -0.1
SMC4P1-201ENST00000414479 FXR2P51116 673 aaKnown RBP eCLIP14.42□□□□□ -0.1
SMC4P1-201ENST00000414479 CADPS2Q86UW7 1296 aa14.41□□□□□ -0.1
SMC4P1-201ENST00000414479 IFNL1Q8IU54 200 aa14.37□□□□□ -0.11
SMC4P1-201ENST00000414479 CABP2Q9NPB3 220 aa14.37□□□□□ -0.11
SMC4P1-201ENST00000414479 ARHGEF1Q92888 912 aaKnown RBP14.35□□□□□ -0.11
SMC4P1-201ENST00000414479 LMOD2Q6P5Q4 547 aa14.34□□□□□ -0.11
SMC4P1-201ENST00000414479 EFCAB3Q8N7B9 438 aa14.34□□□□□ -0.11
SMC4P1-201ENST00000414479 MAP3K13O43283 966 aa14.33□□□□□ -0.12
SMC4P1-201ENST00000414479 KIF12Q96FN5 646 aa14.33□□□□□ -0.12
SMC4P1-201ENST00000414479 E2F4Q16254 413 aa14.31□□□□□ -0.12
SMC4P1-201ENST00000414479 GOLGA2Q08379 1002 aa14.3□□□□□ -0.12
SMC4P1-201ENST00000414479 ERICH6Q7L0X2 663 aa14.3□□□□□ -0.12
SMC4P1-201ENST00000414479 FBXO22Q8NEZ5 403 aa14.3□□□□□ -0.12
SMC4P1-201ENST00000414479 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.29□□□□□ -0.12
SMC4P1-201ENST00000414479 CHRDL2Q6WN34 429 aa14.27□□□□□ -0.13
SMC4P1-201ENST00000414479 PHF8Q9UPP1 1060 aa14.27□□□□□ -0.13
SMC4P1-201ENST00000414479 TMEM132AQ24JP5 1023 aa14.25□□□□□ -0.13
SMC4P1-201ENST00000414479 PPP1R37O75864 691 aa14.24□□□□□ -0.13
SMC4P1-201ENST00000414479 ZRANB1Q9UGI0 708 aa14.24□□□□□ -0.13
SMC4P1-201ENST00000414479 PIP4P2Q8N4L2 257 aa14.22□□□□□ -0.13
SMC4P1-201ENST00000414479 PDE4AP27815 886 aa14.21□□□□□ -0.13
SMC4P1-201ENST00000414479 CD44P16070 742 aaKnown RBP14.2□□□□□ -0.14
SMC4P1-201ENST00000414479 GTF3C3Q9Y5Q9 886 aa14.2□□□□□ -0.14
SMC4P1-201ENST00000414479 SMYD5Q6GMV2 418 aa14.19□□□□□ -0.14
SMC4P1-201ENST00000414479 LARP6Q9BRS8 491 aaKnown RBP14.15□□□□□ -0.14
SMC4P1-201ENST00000414479 MKRN3Q13064 507 aaKnown RBP14.13□□□□□ -0.15
SMC4P1-201ENST00000414479 DDX27Q96GQ7 796 aaKnown RBP14.13□□□□□ -0.15
SMC4P1-201ENST00000414479 TESPA1A2RU30 521 aaPredicted RBP14.12□□□□□ -0.15
SMC4P1-201ENST00000414479 TMEM106CQ9BVX2 250 aa14.12□□□□□ -0.15
SMC4P1-201ENST00000414479 MFSD10Q14728 455 aa14.1□□□□□ -0.15
SMC4P1-201ENST00000414479 PHF12Q96QT6 1004 aa14.1□□□□□ -0.15
SMC4P1-201ENST00000414479 NCKAP5LQ9HCH0 1330 aa14.1□□□□□ -0.15
SMC4P1-201ENST00000414479 SEMA3EO15041 775 aa14.08□□□□□ -0.16
SMC4P1-201ENST00000414479 CRISPLD2Q9H0B8 497 aa14.08□□□□□ -0.16
SMC4P1-201ENST00000414479 ZC3H15Q8WU90 426 aaKnown RBP14.07□□□□□ -0.16
SMC4P1-201ENST00000414479 ARIH1Q9Y4X5 557 aaPredicted RBP14.07□□□□□ -0.16
SMC4P1-201ENST00000414479 MS4A4AQ96JQ5 239 aa14.06□□□□□ -0.16
SMC4P1-201ENST00000414479 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
SMC4P1-201ENST00000414479 TIE1P35590 1138 aa13.99□□□□□ -0.17
SMC4P1-201ENST00000414479 CAMK2BQ13554 666 aa13.98□□□□□ -0.17
SMC4P1-201ENST00000414479 MS4A3Q96HJ5 214 aa13.98□□□□□ -0.17
SMC4P1-201ENST00000414479 BRPF1P55201 1214 aaPredicted RBP13.97□□□□□ -0.17
SMC4P1-201ENST00000414479 NEUROD2Q15784 382 aa13.96□□□□□ -0.17
SMC4P1-201ENST00000414479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMC4P1-201ENST00000414479 PPP1R15BQ5SWA1 713 aa13.92□□□□□ -0.18
SMC4P1-201ENST00000414479 SLC24A3Q9HC58 644 aa13.92□□□□□ -0.18
SMC4P1-201ENST00000414479 DAXXQ9UER7 740 aaPredicted RBP13.92□□□□□ -0.18
SMC4P1-201ENST00000414479 ZMYND10O75800 440 aa13.91□□□□□ -0.18
SMC4P1-201ENST00000414479 GPHNQ9NQX3 736 aaPredicted RBP13.9□□□□□ -0.18
SMC4P1-201ENST00000414479 C19orf67A6NJJ6 358 aa13.89□□□□□ -0.19
SMC4P1-201ENST00000414479 TTLL13PA6NNM8 815 aa13.89□□□□□ -0.19
SMC4P1-201ENST00000414479 C14orf37Q86TY3 774 aa13.87□□□□□ -0.19
SMC4P1-201ENST00000414479 GPIHBP1Q8IV16 184 aa13.87□□□□□ -0.19
SMC4P1-201ENST00000414479 TRPC6Q9Y210 931 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms