RNA–Protein interactions for RNA: ENST00000412459.2

HMGN1P14-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 14, humanhuman

BASIC

Gene HMGN1P14, Length 517 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P14-201ENST00000412459 C7P10643 843 aa13.7□□□□□ -0.22
HMGN1P14-201ENST00000412459 SLC39A7Q92504 469 aa13.7□□□□□ -0.22
HMGN1P14-201ENST00000412459 ATMINO43313 823 aaPredicted RBP13.68□□□□□ -0.22
HMGN1P14-201ENST00000412459 CDAN1Q8IWY9 1227 aa13.68□□□□□ -0.22
HMGN1P14-201ENST00000412459 SCUBE2Q9NQ36 999 aa13.62□□□□□ -0.23
HMGN1P14-201ENST00000412459 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
HMGN1P14-201ENST00000412459 MS4A3Q96HJ5 214 aa13.59□□□□□ -0.23
HMGN1P14-201ENST00000412459 SPDYE4A6NLX3 237 aa13.55□□□□□ -0.24
HMGN1P14-201ENST00000412459 POTEFA5A3E0 1075 aa13.54□□□□□ -0.24
HMGN1P14-201ENST00000412459 STAG3Q9UJ98 1225 aa13.49□□□□□ -0.25
HMGN1P14-201ENST00000412459 MMRN1Q13201 1228 aa13.48□□□□□ -0.25
HMGN1P14-201ENST00000412459 ATN1P54259 1190 aaPredicted RBP13.47□□□□□ -0.25
HMGN1P14-201ENST00000412459 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
HMGN1P14-201ENST00000412459 SPNS2Q8IVW8 549 aa13.4□□□□□ -0.26
HMGN1P14-201ENST00000412459 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
HMGN1P14-201ENST00000412459 PROM2Q8N271 834 aa13.35□□□□□ -0.27
HMGN1P14-201ENST00000412459 ST18O60284 1047 aa13.33□□□□□ -0.28
HMGN1P14-201ENST00000412459 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
HMGN1P14-201ENST00000412459 COLQQ9Y215 455 aaPredicted RBP13.27□□□□□ -0.29
HMGN1P14-201ENST00000412459 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
HMGN1P14-201ENST00000412459 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
HMGN1P14-201ENST00000412459 KIF12Q96FN5 646 aa13.17□□□□□ -0.3
HMGN1P14-201ENST00000412459 TIE1P35590 1138 aa13.14□□□□□ -0.31
HMGN1P14-201ENST00000412459 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
HMGN1P14-201ENST00000412459 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
HMGN1P14-201ENST00000412459 SEC24BO95487 1268 aa13.1□□□□□ -0.31
HMGN1P14-201ENST00000412459 TTLL13PA6NNM8 815 aa13.06□□□□□ -0.32
HMGN1P14-201ENST00000412459 TMEM121BQ9BXQ6 578 aaPredicted RBP13.05□□□□□ -0.32
HMGN1P14-201ENST00000412459 MAP3K13O43283 966 aa13.02□□□□□ -0.33
HMGN1P14-201ENST00000412459 IER5LQ5T953 404 aa13.01□□□□□ -0.33
HMGN1P14-201ENST00000412459 MARVELD3Q96A59 401 aa12.97□□□□□ -0.33
HMGN1P14-201ENST00000412459 TRIM35Q9UPQ4 493 aa12.96□□□□□ -0.33
HMGN1P14-201ENST00000412459 KRTAP3-3Q9BYR6 98 aa12.92□□□□□ -0.34
HMGN1P14-201ENST00000412459 KRTAP3-2Q9BYR7 98 aa12.92□□□□□ -0.34
HMGN1P14-201ENST00000412459 RASEFQ8IZ41 740 aa12.91□□□□□ -0.34
HMGN1P14-201ENST00000412459 MIER1Q8N108 512 aa12.89□□□□□ -0.35
HMGN1P14-201ENST00000412459 POTEB3A0JP26 581 aa12.83□□□□□ -0.36
HMGN1P14-201ENST00000412459 POTEBQ6S5H4 581 aa12.83□□□□□ -0.36
HMGN1P14-201ENST00000412459 SNPHO15079 494 aa12.82□□□□□ -0.36
HMGN1P14-201ENST00000412459 NUBP1P53384 320 aa12.8□□□□□ -0.36
HMGN1P14-201ENST00000412459 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
HMGN1P14-201ENST00000412459 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
HMGN1P14-201ENST00000412459 PLCG2P16885 1265 aa12.77□□□□□ -0.37
HMGN1P14-201ENST00000412459 EMP3P54852 163 aa12.74□□□□□ -0.37
HMGN1P14-201ENST00000412459 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
HMGN1P14-201ENST00000412459 HS3ST6Q96QI5 342 aa12.74□□□□□ -0.37
HMGN1P14-201ENST00000412459 FKBP8Q14318 412 aa12.73□□□□□ -0.37
HMGN1P14-201ENST00000412459 SGIP1Q9BQI5 828 aa12.73□□□□□ -0.37
HMGN1P14-201ENST00000412459 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
HMGN1P14-201ENST00000412459 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.67□□□□□ -0.38
HMGN1P14-201ENST00000412459 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
HMGN1P14-201ENST00000412459 TMEM106CQ9BVX2 250 aa12.65□□□□□ -0.38
HMGN1P14-201ENST00000412459 IFNL1Q8IU54 200 aa12.64□□□□□ -0.39
HMGN1P14-201ENST00000412459 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
HMGN1P14-201ENST00000412459 OCEL1Q9H607 264 aa12.61□□□□□ -0.39
HMGN1P14-201ENST00000412459 RNF166Q96A37 237 aaPredicted RBP12.56□□□□□ -0.4
HMGN1P14-201ENST00000412459 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
HMGN1P14-201ENST00000412459 PYGBP11216 843 aa12.45□□□□□ -0.42
HMGN1P14-201ENST00000412459 DCAF8Q5TAQ9 597 aa12.45□□□□□ -0.42
HMGN1P14-201ENST00000412459 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
HMGN1P14-201ENST00000412459 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
HMGN1P14-201ENST00000412459 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
HMGN1P14-201ENST00000412459 PCDHB8Q9UN66 801 aa12.4□□□□□ -0.42
HMGN1P14-201ENST00000412459 MYT1LQ9UL68 1186 aa12.39□□□□□ -0.43
HMGN1P14-201ENST00000412459 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
HMGN1P14-201ENST00000412459 HOXB3P14651 431 aaPredicted RBP12.33□□□□□ -0.44
HMGN1P14-201ENST00000412459 CHRM1P11229 460 aaPredicted RBP12.3□□□□□ -0.44
HMGN1P14-201ENST00000412459 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
HMGN1P14-201ENST00000412459 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
HMGN1P14-201ENST00000412459 GSE1Q14687 1217 aa12.27□□□□□ -0.45
HMGN1P14-201ENST00000412459 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
HMGN1P14-201ENST00000412459 ERBB3P21860 1342 aa12.24□□□□□ -0.45
HMGN1P14-201ENST00000412459 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
HMGN1P14-201ENST00000412459 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
HMGN1P14-201ENST00000412459 ILDR1Q86SU0 546 aaPredicted RBP12.2□□□□□ -0.46
HMGN1P14-201ENST00000412459 PSEN1P49768 467 aa12.17□□□□□ -0.46
HMGN1P14-201ENST00000412459 VARS2Q5ST30 1063 aaKnown RBP12.16□□□□□ -0.46
HMGN1P14-201ENST00000412459 PTGER2P43116 358 aa12.15□□□□□ -0.46
HMGN1P14-201ENST00000412459 ZNF687Q8N1G0 1237 aa12.12□□□□□ -0.47
HMGN1P14-201ENST00000412459 ZNF710Q8N1W2 664 aa12.12□□□□□ -0.47
HMGN1P14-201ENST00000412459 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
HMGN1P14-201ENST00000412459 MKRN3Q13064 507 aaKnown RBP12.11□□□□□ -0.47
HMGN1P14-201ENST00000412459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.47
HMGN1P14-201ENST00000412459 PDAP1Q13442 181 aaKnown RBP12.08□□□□□ -0.48
HMGN1P14-201ENST00000412459 DPY19L2Q6NUT2 758 aa12.08□□□□□ -0.48
HMGN1P14-201ENST00000412459 DOK7Q18PE1 504 aa12.07□□□□□ -0.48
HMGN1P14-201ENST00000412459 PLA2G2EQ9NZK7 142 aa12.05□□□□□ -0.48
HMGN1P14-201ENST00000412459 GOLGA2Q08379 1002 aa12.04□□□□□ -0.48
HMGN1P14-201ENST00000412459 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
HMGN1P14-201ENST00000412459 CABP2Q9NPB3 220 aa12□□□□□ -0.49
HMGN1P14-201ENST00000412459 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
HMGN1P14-201ENST00000412459 ANKRD13DQ6ZTN6 518 aa11.95□□□□□ -0.5
HMGN1P14-201ENST00000412459 RIMBP2O15034 1052 aa11.93□□□□□ -0.5
HMGN1P14-201ENST00000412459 GPR153Q6NV75 609 aa11.91□□□□□ -0.5
HMGN1P14-201ENST00000412459 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
HMGN1P14-201ENST00000412459 EFCAB3Q8N7B9 438 aa11.89□□□□□ -0.51
HMGN1P14-201ENST00000412459 RNF25Q96BH1 459 aaPredicted RBP11.88□□□□□ -0.51
HMGN1P14-201ENST00000412459 LSM11P83369 360 aaKnown RBP eCLIP11.87□□□□□ -0.51
HMGN1P14-201ENST00000412459 TRIM41Q8WV44 630 aa11.87□□□□□ -0.51
HMGN1P14-201ENST00000412459 G3V3G9 751 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms