RNA–Protein interactions for RNA: ENST00000412459.2

HMGN1P14-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 14, humanhuman

BASIC

Gene HMGN1P14, Length 517 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P14-201ENST00000412459 C7P10643 843 aa13.7□□□□□ -0.22
HMGN1P14-201ENST00000412459 SLC39A7Q92504 469 aa13.7□□□□□ -0.22
HMGN1P14-201ENST00000412459 ATMINO43313 823 aaPredicted RBP13.68□□□□□ -0.22
HMGN1P14-201ENST00000412459 CDAN1Q8IWY9 1227 aa13.68□□□□□ -0.22
HMGN1P14-201ENST00000412459 SCUBE2Q9NQ36 999 aa13.62□□□□□ -0.23
HMGN1P14-201ENST00000412459 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
HMGN1P14-201ENST00000412459 MS4A3Q96HJ5 214 aa13.59□□□□□ -0.23
HMGN1P14-201ENST00000412459 SPDYE4A6NLX3 237 aa13.55□□□□□ -0.24
HMGN1P14-201ENST00000412459 POTEFA5A3E0 1075 aa13.54□□□□□ -0.24
HMGN1P14-201ENST00000412459 STAG3Q9UJ98 1225 aa13.49□□□□□ -0.25
HMGN1P14-201ENST00000412459 MMRN1Q13201 1228 aa13.48□□□□□ -0.25
HMGN1P14-201ENST00000412459 ATN1P54259 1190 aaPredicted RBP13.47□□□□□ -0.25
HMGN1P14-201ENST00000412459 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
HMGN1P14-201ENST00000412459 SPNS2Q8IVW8 549 aa13.4□□□□□ -0.26
HMGN1P14-201ENST00000412459 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
HMGN1P14-201ENST00000412459 PROM2Q8N271 834 aa13.35□□□□□ -0.27
HMGN1P14-201ENST00000412459 ST18O60284 1047 aa13.33□□□□□ -0.28
HMGN1P14-201ENST00000412459 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
HMGN1P14-201ENST00000412459 COLQQ9Y215 455 aaPredicted RBP13.27□□□□□ -0.29
HMGN1P14-201ENST00000412459 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
HMGN1P14-201ENST00000412459 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
HMGN1P14-201ENST00000412459 KIF12Q96FN5 646 aa13.17□□□□□ -0.3
HMGN1P14-201ENST00000412459 TIE1P35590 1138 aa13.14□□□□□ -0.31
HMGN1P14-201ENST00000412459 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
HMGN1P14-201ENST00000412459 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
HMGN1P14-201ENST00000412459 SEC24BO95487 1268 aa13.1□□□□□ -0.31
HMGN1P14-201ENST00000412459 TTLL13PA6NNM8 815 aa13.06□□□□□ -0.32
HMGN1P14-201ENST00000412459 TMEM121BQ9BXQ6 578 aaPredicted RBP13.05□□□□□ -0.32
HMGN1P14-201ENST00000412459 MAP3K13O43283 966 aa13.02□□□□□ -0.33
HMGN1P14-201ENST00000412459 IER5LQ5T953 404 aa13.01□□□□□ -0.33
HMGN1P14-201ENST00000412459 MARVELD3Q96A59 401 aa12.97□□□□□ -0.33
HMGN1P14-201ENST00000412459 TRIM35Q9UPQ4 493 aa12.96□□□□□ -0.33
HMGN1P14-201ENST00000412459 KRTAP3-3Q9BYR6 98 aa12.92□□□□□ -0.34
HMGN1P14-201ENST00000412459 KRTAP3-2Q9BYR7 98 aa12.92□□□□□ -0.34
HMGN1P14-201ENST00000412459 RASEFQ8IZ41 740 aa12.91□□□□□ -0.34
HMGN1P14-201ENST00000412459 MIER1Q8N108 512 aa12.89□□□□□ -0.35
HMGN1P14-201ENST00000412459 POTEB3A0JP26 581 aa12.83□□□□□ -0.36
HMGN1P14-201ENST00000412459 POTEBQ6S5H4 581 aa12.83□□□□□ -0.36
HMGN1P14-201ENST00000412459 SNPHO15079 494 aa12.82□□□□□ -0.36
HMGN1P14-201ENST00000412459 NUBP1P53384 320 aa12.8□□□□□ -0.36
HMGN1P14-201ENST00000412459 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
HMGN1P14-201ENST00000412459 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
HMGN1P14-201ENST00000412459 PLCG2P16885 1265 aa12.77□□□□□ -0.37
HMGN1P14-201ENST00000412459 EMP3P54852 163 aa12.74□□□□□ -0.37
HMGN1P14-201ENST00000412459 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
HMGN1P14-201ENST00000412459 HS3ST6Q96QI5 342 aa12.74□□□□□ -0.37
HMGN1P14-201ENST00000412459 FKBP8Q14318 412 aa12.73□□□□□ -0.37
HMGN1P14-201ENST00000412459 SGIP1Q9BQI5 828 aa12.73□□□□□ -0.37
HMGN1P14-201ENST00000412459 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
HMGN1P14-201ENST00000412459 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.67□□□□□ -0.38
HMGN1P14-201ENST00000412459 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
HMGN1P14-201ENST00000412459 TMEM106CQ9BVX2 250 aa12.65□□□□□ -0.38
HMGN1P14-201ENST00000412459 IFNL1Q8IU54 200 aa12.64□□□□□ -0.39
HMGN1P14-201ENST00000412459 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
HMGN1P14-201ENST00000412459 OCEL1Q9H607 264 aa12.61□□□□□ -0.39
HMGN1P14-201ENST00000412459 RNF166Q96A37 237 aaPredicted RBP12.56□□□□□ -0.4
HMGN1P14-201ENST00000412459 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
HMGN1P14-201ENST00000412459 PYGBP11216 843 aa12.45□□□□□ -0.42
HMGN1P14-201ENST00000412459 DCAF8Q5TAQ9 597 aa12.45□□□□□ -0.42
HMGN1P14-201ENST00000412459 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
HMGN1P14-201ENST00000412459 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
HMGN1P14-201ENST00000412459 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
HMGN1P14-201ENST00000412459 PCDHB8Q9UN66 801 aa12.4□□□□□ -0.42
HMGN1P14-201ENST00000412459 MYT1LQ9UL68 1186 aa12.39□□□□□ -0.43
HMGN1P14-201ENST00000412459 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
HMGN1P14-201ENST00000412459 HOXB3P14651 431 aaPredicted RBP12.33□□□□□ -0.44
HMGN1P14-201ENST00000412459 CHRM1P11229 460 aaPredicted RBP12.3□□□□□ -0.44
HMGN1P14-201ENST00000412459 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
HMGN1P14-201ENST00000412459 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
HMGN1P14-201ENST00000412459 GSE1Q14687 1217 aa12.27□□□□□ -0.45
HMGN1P14-201ENST00000412459 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
HMGN1P14-201ENST00000412459 ERBB3P21860 1342 aa12.24□□□□□ -0.45
HMGN1P14-201ENST00000412459 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
HMGN1P14-201ENST00000412459 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
HMGN1P14-201ENST00000412459 ILDR1Q86SU0 546 aaPredicted RBP12.2□□□□□ -0.46
HMGN1P14-201ENST00000412459 PSEN1P49768 467 aa12.17□□□□□ -0.46
HMGN1P14-201ENST00000412459 VARS2Q5ST30 1063 aaKnown RBP12.16□□□□□ -0.46
HMGN1P14-201ENST00000412459 PTGER2P43116 358 aa12.15□□□□□ -0.46
HMGN1P14-201ENST00000412459 ZNF687Q8N1G0 1237 aa12.12□□□□□ -0.47
HMGN1P14-201ENST00000412459 ZNF710Q8N1W2 664 aa12.12□□□□□ -0.47
HMGN1P14-201ENST00000412459 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
HMGN1P14-201ENST00000412459 MKRN3Q13064 507 aaKnown RBP12.11□□□□□ -0.47
HMGN1P14-201ENST00000412459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.47
HMGN1P14-201ENST00000412459 PDAP1Q13442 181 aaKnown RBP12.08□□□□□ -0.48
HMGN1P14-201ENST00000412459 DPY19L2Q6NUT2 758 aa12.08□□□□□ -0.48
HMGN1P14-201ENST00000412459 DOK7Q18PE1 504 aa12.07□□□□□ -0.48
HMGN1P14-201ENST00000412459 PLA2G2EQ9NZK7 142 aa12.05□□□□□ -0.48
HMGN1P14-201ENST00000412459 GOLGA2Q08379 1002 aa12.04□□□□□ -0.48
HMGN1P14-201ENST00000412459 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
HMGN1P14-201ENST00000412459 CABP2Q9NPB3 220 aa12□□□□□ -0.49
HMGN1P14-201ENST00000412459 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
HMGN1P14-201ENST00000412459 ANKRD13DQ6ZTN6 518 aa11.95□□□□□ -0.5
HMGN1P14-201ENST00000412459 RIMBP2O15034 1052 aa11.93□□□□□ -0.5
HMGN1P14-201ENST00000412459 GPR153Q6NV75 609 aa11.91□□□□□ -0.5
HMGN1P14-201ENST00000412459 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
HMGN1P14-201ENST00000412459 EFCAB3Q8N7B9 438 aa11.89□□□□□ -0.51
HMGN1P14-201ENST00000412459 RNF25Q96BH1 459 aaPredicted RBP11.88□□□□□ -0.51
HMGN1P14-201ENST00000412459 LSM11P83369 360 aaKnown RBP eCLIP11.87□□□□□ -0.51
HMGN1P14-201ENST00000412459 TRIM41Q8WV44 630 aa11.87□□□□□ -0.51
HMGN1P14-201ENST00000412459 G3V3G9 751 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms