RNA–Protein interactions for RNA: ENST00000412459.2

HMGN1P14-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 14, humanhuman

BASIC

Gene HMGN1P14, Length 517 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P14-201ENST00000412459 AEBP2Q6ZN18 517 aaPredicted RBP28.68■■■□□ 2.18
HMGN1P14-201ENST00000412459 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
HMGN1P14-201ENST00000412459 SENP3Q9H4L4 574 aaPredicted RBP24.51■■□□□ 1.51
HMGN1P14-201ENST00000412459 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
HMGN1P14-201ENST00000412459 POTEDQ86YR6 584 aa23.37■■□□□ 1.33
HMGN1P14-201ENST00000412459 FOXD1Q16676 465 aa23.06■■□□□ 1.28
HMGN1P14-201ENST00000412459 MSH5O43196 834 aa21.91■■□□□ 1.1
HMGN1P14-201ENST00000412459 PIAS4Q8N2W9 510 aaPredicted RBP21.2■□□□□ 0.98
HMGN1P14-201ENST00000412459 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
HMGN1P14-201ENST00000412459 ADRA2BP18089 450 aa20.56■□□□□ 0.88
HMGN1P14-201ENST00000412459 PLPPR3Q6T4P5 718 aa20.27■□□□□ 0.84
HMGN1P14-201ENST00000412459 CACNB1Q02641 598 aaPredicted RBP19.46■□□□□ 0.71
HMGN1P14-201ENST00000412459 DMRT2Q9Y5R5 561 aa19.31■□□□□ 0.68
HMGN1P14-201ENST00000412459 MAPK8IP2Q13387 824 aaPredicted RBP19.24■□□□□ 0.67
HMGN1P14-201ENST00000412459 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
HMGN1P14-201ENST00000412459 RNF39Q9H2S5 420 aa18.66■□□□□ 0.58
HMGN1P14-201ENST00000412459 DCAF8L1A6NGE4 600 aa18.45■□□□□ 0.54
HMGN1P14-201ENST00000412459 C1QBPQ07021 282 aaKnown RBP18.27■□□□□ 0.52
HMGN1P14-201ENST00000412459 HOXD11P31277 338 aaPredicted RBP18.18■□□□□ 0.5
HMGN1P14-201ENST00000412459 POTEHQ6S545 545 aa18.05■□□□□ 0.48
HMGN1P14-201ENST00000412459 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
HMGN1P14-201ENST00000412459 RNF216Q9NWF9 866 aaPredicted RBP17.7■□□□□ 0.42
HMGN1P14-201ENST00000412459 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
HMGN1P14-201ENST00000412459 CNKSR2Q8WXI2 1034 aa17.56■□□□□ 0.4
HMGN1P14-201ENST00000412459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.34
HMGN1P14-201ENST00000412459 DSG3P32926 999 aa17.11■□□□□ 0.33
HMGN1P14-201ENST00000412459 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
HMGN1P14-201ENST00000412459 CAPN15O75808 1086 aa16.84■□□□□ 0.29
HMGN1P14-201ENST00000412459 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
HMGN1P14-201ENST00000412459 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
HMGN1P14-201ENST00000412459 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
HMGN1P14-201ENST00000412459 ABCB7O75027 752 aa16.4■□□□□ 0.22
HMGN1P14-201ENST00000412459 SP7Q8TDD2 431 aaPredicted RBP16.4■□□□□ 0.22
HMGN1P14-201ENST00000412459 CHRDL2Q6WN34 429 aa16.39■□□□□ 0.21
HMGN1P14-201ENST00000412459 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
HMGN1P14-201ENST00000412459 RBM42Q9BTD8 480 aaKnown RBP16.25■□□□□ 0.19
HMGN1P14-201ENST00000412459 KCNA4P22459 653 aa16.24■□□□□ 0.19
HMGN1P14-201ENST00000412459 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
HMGN1P14-201ENST00000412459 APLP2Q06481 763 aa16.06■□□□□ 0.16
HMGN1P14-201ENST00000412459 SLC4A2P04920 1241 aa16.02■□□□□ 0.16
HMGN1P14-201ENST00000412459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
HMGN1P14-201ENST00000412459 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
HMGN1P14-201ENST00000412459 PIP4P2Q8N4L2 257 aa15.79■□□□□ 0.12
HMGN1P14-201ENST00000412459 HAX1O00165 279 aa15.73■□□□□ 0.11
HMGN1P14-201ENST00000412459 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
HMGN1P14-201ENST00000412459 AKT1S1Q96B36 256 aa15.68■□□□□ 0.1
HMGN1P14-201ENST00000412459 POLA2Q14181 598 aa15.64■□□□□ 0.09
HMGN1P14-201ENST00000412459 EVX2Q03828 476 aa15.59■□□□□ 0.09
HMGN1P14-201ENST00000412459 REM2Q8IYK8 340 aaPredicted RBP15.56■□□□□ 0.08
HMGN1P14-201ENST00000412459 FXR2P51116 673 aaKnown RBP eCLIP15.53■□□□□ 0.08
HMGN1P14-201ENST00000412459 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
HMGN1P14-201ENST00000412459 LHX8Q68G74 356 aa15.35■□□□□ 0.05
HMGN1P14-201ENST00000412459 MYCNP04198 464 aaPredicted RBP15.34■□□□□ 0.05
HMGN1P14-201ENST00000412459 PLSCR2Q9NRY7 297 aa15.25■□□□□ 0.03
HMGN1P14-201ENST00000412459 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
HMGN1P14-201ENST00000412459 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.03
HMGN1P14-201ENST00000412459 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
HMGN1P14-201ENST00000412459 ATF5Q9Y2D1 282 aaPredicted RBP15.14■□□□□ 0.01
HMGN1P14-201ENST00000412459 FOXD4L1Q9NU39 408 aa15.13■□□□□ 0.01
HMGN1P14-201ENST00000412459 GABBR2O75899 941 aa15.11■□□□□ 0.01
HMGN1P14-201ENST00000412459 C19orf67A6NJJ6 358 aa15.07■□□□□ 0
HMGN1P14-201ENST00000412459 ZBTB22O15209 634 aa15□□□□□ -0.01
HMGN1P14-201ENST00000412459 PRKAR2AP13861 404 aaKnown RBP14.98□□□□□ -0.01
HMGN1P14-201ENST00000412459 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
HMGN1P14-201ENST00000412459 SPDYE2BA6NHP3 402 aa14.68□□□□□ -0.06
HMGN1P14-201ENST00000412459 SPDYE6P0CI01 402 aa14.68□□□□□ -0.06
HMGN1P14-201ENST00000412459 ATXN8OSP0DMR3 200 aa14.68□□□□□ -0.06
HMGN1P14-201ENST00000412459 SPDYE2Q495Y8 402 aa14.68□□□□□ -0.06
HMGN1P14-201ENST00000412459 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
HMGN1P14-201ENST00000412459 SPDYE1Q8NFV5 336 aaPredicted RBP14.66□□□□□ -0.06
HMGN1P14-201ENST00000412459 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
HMGN1P14-201ENST00000412459 POTEMA6NI47 508 aa14.52□□□□□ -0.09
HMGN1P14-201ENST00000412459 OTUD5Q96G74 571 aa14.48□□□□□ -0.09
HMGN1P14-201ENST00000412459 POTEGQ6S5H5 508 aa14.44□□□□□ -0.1
HMGN1P14-201ENST00000412459 CD44P16070 742 aaKnown RBP14.43□□□□□ -0.1
HMGN1P14-201ENST00000412459 MKRN4PQ13434 485 aaPredicted RBP14.43□□□□□ -0.1
HMGN1P14-201ENST00000412459 SSUH2Q9Y2M2 353 aa14.42□□□□□ -0.1
HMGN1P14-201ENST00000412459 CLCN6P51797 869 aa14.39□□□□□ -0.11
HMGN1P14-201ENST00000412459 DCBLD2Q96PD2 775 aa14.37□□□□□ -0.11
HMGN1P14-201ENST00000412459 POTEB2H3BUK9 544 aa14.35□□□□□ -0.11
HMGN1P14-201ENST00000412459 FBLN2P98095 1184 aa14.34□□□□□ -0.11
HMGN1P14-201ENST00000412459 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
HMGN1P14-201ENST00000412459 PRR29P0C7W0 189 aa14.28□□□□□ -0.12
HMGN1P14-201ENST00000412459 PCDH10Q9P2E7 1040 aa14.28□□□□□ -0.12
HMGN1P14-201ENST00000412459 FARP1Q9Y4F1 1045 aaPredicted RBP14.24□□□□□ -0.13
HMGN1P14-201ENST00000412459 ZNF579Q8NAF0 562 aaKnown RBP14.19□□□□□ -0.14
HMGN1P14-201ENST00000412459 CSRNP3Q8WYN3 585 aa14.15□□□□□ -0.14
HMGN1P14-201ENST00000412459 GALR2O43603 387 aaPredicted RBP14.11□□□□□ -0.15
HMGN1P14-201ENST00000412459 LCE2DQ5TA82 110 aaPredicted RBP14.09□□□□□ -0.15
HMGN1P14-201ENST00000412459 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
HMGN1P14-201ENST00000412459 ZRANB1Q9UGI0 708 aa14.04□□□□□ -0.16
HMGN1P14-201ENST00000412459 PELP1Q8IZL8 1130 aaKnown RBP13.98□□□□□ -0.17
HMGN1P14-201ENST00000412459 POTEJP0CG39 1038 aa13.97□□□□□ -0.17
HMGN1P14-201ENST00000412459 FAM163AQ96GL9 167 aaPredicted RBP13.83□□□□□ -0.2
HMGN1P14-201ENST00000412459 METRNQ9UJH8 293 aa13.81□□□□□ -0.2
HMGN1P14-201ENST00000412459 PHF12Q96QT6 1004 aa13.8□□□□□ -0.2
HMGN1P14-201ENST00000412459 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
HMGN1P14-201ENST00000412459 MAMSTRQ6ZN01 415 aa13.75□□□□□ -0.21
HMGN1P14-201ENST00000412459 ASTLQ6HA08 431 aaPredicted RBP13.74□□□□□ -0.21
HMGN1P14-201ENST00000412459 EHMT2Q96KQ7 1210 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms