RNA–Protein interactions for RNA: ENST00000411856.1

AC003975.1-201, humanhuman

TSL 3 BASIC

Gene AC003975.1, Length 837 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003975.1-201ENST00000411856 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
AC003975.1-201ENST00000411856 RIOK3O14730 519 aaKnown RBP11.98□□□□□ -0.49
AC003975.1-201ENST00000411856 NBR1Q14596 966 aa11.96□□□□□ -0.49
AC003975.1-201ENST00000411856 DCAF8Q5TAQ9 597 aa11.96□□□□□ -0.49
AC003975.1-201ENST00000411856 GTPBP6O43824 516 aaPredicted RBP11.95□□□□□ -0.5
AC003975.1-201ENST00000411856 MNX1P50219 401 aaPredicted RBP11.92□□□□□ -0.5
AC003975.1-201ENST00000411856 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
AC003975.1-201ENST00000411856 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
AC003975.1-201ENST00000411856 CACNB1Q02641 598 aaPredicted RBP11.9□□□□□ -0.5
AC003975.1-201ENST00000411856 VGFO15240 615 aaPredicted RBP11.89□□□□□ -0.51
AC003975.1-201ENST00000411856 FAM212AQ96EL1 285 aa11.89□□□□□ -0.51
AC003975.1-201ENST00000411856 STK25O00506 426 aa11.88□□□□□ -0.51
AC003975.1-201ENST00000411856 CHRM1P11229 460 aaPredicted RBP11.86□□□□□ -0.51
AC003975.1-201ENST00000411856 RASEFQ8IZ41 740 aa11.85□□□□□ -0.51
AC003975.1-201ENST00000411856 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
AC003975.1-201ENST00000411856 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
AC003975.1-201ENST00000411856 CLEC11AQ9Y240 323 aa11.83□□□□□ -0.52
AC003975.1-201ENST00000411856 PRR29P0C7W0 189 aa11.82□□□□□ -0.52
AC003975.1-201ENST00000411856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.8□□□□□ -0.52
AC003975.1-201ENST00000411856 ZFP91Q96JP5 570 aaPredicted RBP11.8□□□□□ -0.52
AC003975.1-201ENST00000411856 RBM42Q9BTD8 480 aaKnown RBP11.8□□□□□ -0.52
AC003975.1-201ENST00000411856 BCL11BQ9C0K0 894 aaPredicted RBP11.79□□□□□ -0.52
AC003975.1-201ENST00000411856 STK24Q9Y6E0 443 aa11.78□□□□□ -0.52
AC003975.1-201ENST00000411856 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
AC003975.1-201ENST00000411856 PYGBP11216 843 aa11.74□□□□□ -0.53
AC003975.1-201ENST00000411856 RYDENQ9NUL5 291 aaKnown RBP11.71□□□□□ -0.53
AC003975.1-201ENST00000411856 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
AC003975.1-201ENST00000411856 CADPS2Q86UW7 1296 aa11.6□□□□□ -0.55
AC003975.1-201ENST00000411856 P3H3Q8IVL6 736 aa11.6□□□□□ -0.55
AC003975.1-201ENST00000411856 ZNF467Q7Z7K2 595 aaPredicted RBP11.56□□□□□ -0.56
AC003975.1-201ENST00000411856 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
AC003975.1-201ENST00000411856 TIMELESSQ9UNS1 1208 aa11.55□□□□□ -0.56
AC003975.1-201ENST00000411856 TSPYL2Q9H2G4 693 aaPredicted RBP11.53□□□□□ -0.56
AC003975.1-201ENST00000411856 PDAP1Q13442 181 aaKnown RBP11.52□□□□□ -0.57
AC003975.1-201ENST00000411856 CHADLQ6NUI6 762 aa11.52□□□□□ -0.57
AC003975.1-201ENST00000411856 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
AC003975.1-201ENST00000411856 PCDHB8Q9UN66 801 aa11.5□□□□□ -0.57
AC003975.1-201ENST00000411856 PCDHB13Q9Y5F0 798 aa11.5□□□□□ -0.57
AC003975.1-201ENST00000411856 MFRPQ9BY79 579 aa11.49□□□□□ -0.57
AC003975.1-201ENST00000411856 WDR70Q9NW82 654 aa11.49□□□□□ -0.57
AC003975.1-201ENST00000411856 GTF3C3Q9Y5Q9 886 aa11.49□□□□□ -0.57
AC003975.1-201ENST00000411856 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.57
AC003975.1-201ENST00000411856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.46□□□□□ -0.57
AC003975.1-201ENST00000411856 FARP1Q9Y4F1 1045 aaPredicted RBP11.46□□□□□ -0.57
AC003975.1-201ENST00000411856 PSEN1P49768 467 aa11.45□□□□□ -0.58
AC003975.1-201ENST00000411856 TMEM132AQ24JP5 1023 aa11.45□□□□□ -0.58
AC003975.1-201ENST00000411856 CCDC61Q9Y6R9 512 aa11.44□□□□□ -0.58
AC003975.1-201ENST00000411856 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
AC003975.1-201ENST00000411856 PPP1R37O75864 691 aa11.4□□□□□ -0.58
AC003975.1-201ENST00000411856 FBXO22Q8NEZ5 403 aa11.37□□□□□ -0.59
AC003975.1-201ENST00000411856 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
AC003975.1-201ENST00000411856 IFNL1Q8IU54 200 aa11.34□□□□□ -0.59
AC003975.1-201ENST00000411856 EFCAB3Q8N7B9 438 aa11.33□□□□□ -0.6
AC003975.1-201ENST00000411856 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
AC003975.1-201ENST00000411856 NLRP6P59044 892 aa11.31□□□□□ -0.6
AC003975.1-201ENST00000411856 E2F4Q16254 413 aa11.31□□□□□ -0.6
AC003975.1-201ENST00000411856 PHF8Q9UPP1 1060 aa11.31□□□□□ -0.6
AC003975.1-201ENST00000411856 CABP2Q9NPB3 220 aa11.3□□□□□ -0.6
AC003975.1-201ENST00000411856 SOX12O15370 315 aa11.29□□□□□ -0.6
AC003975.1-201ENST00000411856 MAP3K13O43283 966 aa11.29□□□□□ -0.6
AC003975.1-201ENST00000411856 BRPF1P55201 1214 aaPredicted RBP11.29□□□□□ -0.6
AC003975.1-201ENST00000411856 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
AC003975.1-201ENST00000411856 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
AC003975.1-201ENST00000411856 ZC3H15Q8WU90 426 aaKnown RBP11.28□□□□□ -0.6
AC003975.1-201ENST00000411856 SEMA3EO15041 775 aa11.27□□□□□ -0.61
AC003975.1-201ENST00000411856 KIF12Q96FN5 646 aa11.27□□□□□ -0.61
AC003975.1-201ENST00000411856 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.61
AC003975.1-201ENST00000411856 NCKAP5LQ9HCH0 1330 aa11.25□□□□□ -0.61
AC003975.1-201ENST00000411856 PAK3O75914 559 aaPredicted RBP11.23□□□□□ -0.61
AC003975.1-201ENST00000411856 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
AC003975.1-201ENST00000411856 MFSD10Q14728 455 aa11.2□□□□□ -0.62
AC003975.1-201ENST00000411856 SLC24A3Q9HC58 644 aa11.19□□□□□ -0.62
AC003975.1-201ENST00000411856 LARP6Q9BRS8 491 aaKnown RBP11.18□□□□□ -0.62
AC003975.1-201ENST00000411856 C14orf37Q86TY3 774 aa11.17□□□□□ -0.62
AC003975.1-201ENST00000411856 CRISPLD2Q9H0B8 497 aa11.17□□□□□ -0.62
AC003975.1-201ENST00000411856 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
AC003975.1-201ENST00000411856 ARIH1Q9Y4X5 557 aaPredicted RBP11.16□□□□□ -0.62
AC003975.1-201ENST00000411856 PDE4AP27815 886 aa11.15□□□□□ -0.62
AC003975.1-201ENST00000411856 ZMYND10O75800 440 aa11.13□□□□□ -0.63
AC003975.1-201ENST00000411856 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
AC003975.1-201ENST00000411856 CAMK2BQ13554 666 aa11.11□□□□□ -0.63
AC003975.1-201ENST00000411856 PIP4P2Q8N4L2 257 aa11.11□□□□□ -0.63
AC003975.1-201ENST00000411856 ARXQ96QS3 562 aa11.1□□□□□ -0.63
AC003975.1-201ENST00000411856 PHF12Q96QT6 1004 aa11.1□□□□□ -0.63
AC003975.1-201ENST00000411856 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
AC003975.1-201ENST00000411856 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
AC003975.1-201ENST00000411856 BARGINQ6ZT62 677 aa11.06□□□□□ -0.64
AC003975.1-201ENST00000411856 TMEM106CQ9BVX2 250 aa11.06□□□□□ -0.64
AC003975.1-201ENST00000411856 CHRDL2Q6WN34 429 aa11.05□□□□□ -0.64
AC003975.1-201ENST00000411856 TRPC6Q9Y210 931 aa11.05□□□□□ -0.64
AC003975.1-201ENST00000411856 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
AC003975.1-201ENST00000411856 GOLGA2Q08379 1002 aa11.02□□□□□ -0.65
AC003975.1-201ENST00000411856 MLLT3P42568 568 aaPredicted RBP11.01□□□□□ -0.65
AC003975.1-201ENST00000411856 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
AC003975.1-201ENST00000411856 MS4A3Q96HJ5 214 aa10.99□□□□□ -0.65
AC003975.1-201ENST00000411856 MKRN3Q13064 507 aaKnown RBP10.98□□□□□ -0.65
AC003975.1-201ENST00000411856 PPP1R15BQ5SWA1 713 aa10.98□□□□□ -0.65
AC003975.1-201ENST00000411856 ILDR1Q86SU0 546 aaPredicted RBP10.97□□□□□ -0.65
AC003975.1-201ENST00000411856 GPIHBP1Q8IV16 184 aa10.97□□□□□ -0.65
AC003975.1-201ENST00000411856 AK7Q96M32 723 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms