RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 METRNQ9UJH8 293 aa8.62□□□□□ -1.03
RNU4-78P-201ENST00000410940 ASTLQ6HA08 431 aaPredicted RBP8.59□□□□□ -1.03
RNU4-78P-201ENST00000410940 MAMSTRQ6ZN01 415 aa8.59□□□□□ -1.03
RNU4-78P-201ENST00000410940 SLC39A7Q92504 469 aa8.59□□□□□ -1.03
RNU4-78P-201ENST00000410940 FAM163AQ96GL9 167 aaPredicted RBP8.59□□□□□ -1.03
RNU4-78P-201ENST00000410940 C7P10643 843 aa8.58□□□□□ -1.04
RNU4-78P-201ENST00000410940 STAG3Q9UJ98 1225 aa8.57□□□□□ -1.04
RNU4-78P-201ENST00000410940 ATMINO43313 823 aaPredicted RBP8.56□□□□□ -1.04
RNU4-78P-201ENST00000410940 MS4A3Q96HJ5 214 aa8.53□□□□□ -1.04
RNU4-78P-201ENST00000410940 SCUBE2Q9NQ36 999 aa8.52□□□□□ -1.05
RNU4-78P-201ENST00000410940 NPM1P06748 294 aaKnown RBP eCLIP8.51□□□□□ -1.05
RNU4-78P-201ENST00000410940 MNX1P50219 401 aaPredicted RBP8.48□□□□□ -1.05
RNU4-78P-201ENST00000410940 CDAN1Q8IWY9 1227 aa8.46□□□□□ -1.06
RNU4-78P-201ENST00000410940 ATN1P54259 1190 aaPredicted RBP8.45□□□□□ -1.06
RNU4-78P-201ENST00000410940 POTEFA5A3E0 1075 aa8.42□□□□□ -1.06
RNU4-78P-201ENST00000410940 FKBP8Q14318 412 aa8.41□□□□□ -1.06
RNU4-78P-201ENST00000410940 TSPYL2Q9H2G4 693 aaPredicted RBP8.35□□□□□ -1.07
RNU4-78P-201ENST00000410940 CCDC61Q9Y6R9 512 aa8.35□□□□□ -1.07
RNU4-78P-201ENST00000410940 SPDYE4A6NLX3 237 aa8.34□□□□□ -1.07
RNU4-78P-201ENST00000410940 BMP2KQ9NSY1 1161 aaPredicted RBP8.34□□□□□ -1.07
RNU4-78P-201ENST00000410940 KIF12Q96FN5 646 aa8.32□□□□□ -1.08
RNU4-78P-201ENST00000410940 TRPC6Q9Y210 931 aa8.31□□□□□ -1.08
RNU4-78P-201ENST00000410940 COLQQ9Y215 455 aaPredicted RBP8.31□□□□□ -1.08
RNU4-78P-201ENST00000410940 ST18O60284 1047 aa8.3□□□□□ -1.08
RNU4-78P-201ENST00000410940 MMRN1Q13201 1228 aa8.3□□□□□ -1.08
RNU4-78P-201ENST00000410940 SEC24BO95487 1268 aa8.29□□□□□ -1.08
RNU4-78P-201ENST00000410940 TIE1P35590 1138 aa8.29□□□□□ -1.08
RNU4-78P-201ENST00000410940 SPNS2Q8IVW8 549 aa8.26□□□□□ -1.09
RNU4-78P-201ENST00000410940 MAP3K13O43283 966 aa8.25□□□□□ -1.09
RNU4-78P-201ENST00000410940 TTLL13PA6NNM8 815 aa8.23□□□□□ -1.09
RNU4-78P-201ENST00000410940 SLAIN1Q8ND83 568 aa8.23□□□□□ -1.09
RNU4-78P-201ENST00000410940 IER5LQ5T953 404 aa8.2□□□□□ -1.1
RNU4-78P-201ENST00000410940 TRIM35Q9UPQ4 493 aa8.19□□□□□ -1.1
RNU4-78P-201ENST00000410940 TMEM121BQ9BXQ6 578 aaPredicted RBP8.15□□□□□ -1.1
RNU4-78P-201ENST00000410940 FBXO3Q9UK99 471 aa8.14□□□□□ -1.11
RNU4-78P-201ENST00000410940 RASEFQ8IZ41 740 aa8.13□□□□□ -1.11
RNU4-78P-201ENST00000410940 PLCB2Q00722 1185 aa8.11□□□□□ -1.11
RNU4-78P-201ENST00000410940 SGIP1Q9BQI5 828 aa8.1□□□□□ -1.11
RNU4-78P-201ENST00000410940 MARVELD3Q96A59 401 aa8.09□□□□□ -1.11
RNU4-78P-201ENST00000410940 PCDHB13Q9Y5F0 798 aa8.09□□□□□ -1.11
RNU4-78P-201ENST00000410940 PLCG2P16885 1265 aa8.08□□□□□ -1.12
RNU4-78P-201ENST00000410940 SNPHO15079 494 aa8.07□□□□□ -1.12
RNU4-78P-201ENST00000410940 IRX5P78411 483 aaPredicted RBP8.05□□□□□ -1.12
RNU4-78P-201ENST00000410940 BCANQ96GW7 911 aa8.05□□□□□ -1.12
RNU4-78P-201ENST00000410940 PLEKHG5O94827 1062 aa8.04□□□□□ -1.12
RNU4-78P-201ENST00000410940 PROM2Q8N271 834 aa8.04□□□□□ -1.12
RNU4-78P-201ENST00000410940 IFNL1Q8IU54 200 aa8.03□□□□□ -1.12
RNU4-78P-201ENST00000410940 TMEM106CQ9BVX2 250 aa8.03□□□□□ -1.12
RNU4-78P-201ENST00000410940 MIER1Q8N108 512 aa8.02□□□□□ -1.13
RNU4-78P-201ENST00000410940 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.01□□□□□ -1.13
RNU4-78P-201ENST00000410940 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
RNU4-78P-201ENST00000410940 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
RNU4-78P-201ENST00000410940 OCEL1Q9H607 264 aa7.99□□□□□ -1.13
RNU4-78P-201ENST00000410940 EMP3P54852 163 aa7.98□□□□□ -1.13
RNU4-78P-201ENST00000410940 VSIG10Q8N0Z9 540 aa7.98□□□□□ -1.13
RNU4-78P-201ENST00000410940 POTEB3A0JP26 581 aa7.96□□□□□ -1.14
RNU4-78P-201ENST00000410940 POTEBQ6S5H4 581 aa7.96□□□□□ -1.14
RNU4-78P-201ENST00000410940 HS3ST6Q96QI5 342 aa7.95□□□□□ -1.14
RNU4-78P-201ENST00000410940 HAP1P54257 671 aaPredicted RBP7.94□□□□□ -1.14
RNU4-78P-201ENST00000410940 FAM205CA6NFA0 338 aa7.92□□□□□ -1.14
RNU4-78P-201ENST00000410940 NUBP1P53384 320 aa7.92□□□□□ -1.14
RNU4-78P-201ENST00000410940 PLCD3Q8N3E9 789 aa7.88□□□□□ -1.15
RNU4-78P-201ENST00000410940 VASPP50552 380 aaPredicted RBP7.87□□□□□ -1.15
RNU4-78P-201ENST00000410940 C3orf67Q6ZVT6 689 aa7.87□□□□□ -1.15
RNU4-78P-201ENST00000410940 FAM212AQ96EL1 285 aa7.87□□□□□ -1.15
RNU4-78P-201ENST00000410940 ZBTB47Q9UFB7 747 aaPredicted RBP7.86□□□□□ -1.15
RNU4-78P-201ENST00000410940 TAOK2Q9UL54 1235 aa7.86□□□□□ -1.15
RNU4-78P-201ENST00000410940 PDCD7Q8N8D1 485 aaKnown RBP7.84□□□□□ -1.15
RNU4-78P-201ENST00000410940 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.84□□□□□ -1.15
RNU4-78P-201ENST00000410940 DCAF8L2P0C7V8 631 aa7.82□□□□□ -1.16
RNU4-78P-201ENST00000410940 L3MBTL3Q96JM7 780 aaPredicted RBP7.82□□□□□ -1.16
RNU4-78P-201ENST00000410940 RNF166Q96A37 237 aaPredicted RBP7.81□□□□□ -1.16
RNU4-78P-201ENST00000410940 PCDHB8Q9UN66 801 aa7.8□□□□□ -1.16
RNU4-78P-201ENST00000410940 PYGBP11216 843 aa7.79□□□□□ -1.16
RNU4-78P-201ENST00000410940 BBXQ8WY36 941 aaPredicted RBP7.79□□□□□ -1.16
RNU4-78P-201ENST00000410940 IFNLR1Q8IU57 520 aaPredicted RBP7.75□□□□□ -1.17
RNU4-78P-201ENST00000410940 HOXB3P14651 431 aaPredicted RBP7.74□□□□□ -1.17
RNU4-78P-201ENST00000410940 MKRN3Q13064 507 aaKnown RBP7.74□□□□□ -1.17
RNU4-78P-201ENST00000410940 DCAF8Q5TAQ9 597 aa7.74□□□□□ -1.17
RNU4-78P-201ENST00000410940 MYT1LQ9UL68 1186 aa7.74□□□□□ -1.17
RNU4-78P-201ENST00000410940 GOLGA2Q08379 1002 aa7.73□□□□□ -1.17
RNU4-78P-201ENST00000410940 PKD2Q13563 968 aa7.73□□□□□ -1.17
RNU4-78P-201ENST00000410940 ERBB3P21860 1342 aa7.73□□□□□ -1.17
RNU4-78P-201ENST00000410940 PRKCSHP14314 528 aaPredicted RBP7.72□□□□□ -1.17
RNU4-78P-201ENST00000410940 HOXB1P14653 301 aaPredicted RBP7.72□□□□□ -1.17
RNU4-78P-201ENST00000410940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.72□□□□□ -1.17
RNU4-78P-201ENST00000410940 ERICH6Q7L0X2 663 aa7.7□□□□□ -1.18
RNU4-78P-201ENST00000410940 ZNF710Q8N1W2 664 aa7.69□□□□□ -1.18
RNU4-78P-201ENST00000410940 TPRNQ4KMQ1 711 aa7.68□□□□□ -1.18
RNU4-78P-201ENST00000410940 DPY19L2Q6NUT2 758 aa7.66□□□□□ -1.18
RNU4-78P-201ENST00000410940 ZNF467Q7Z7K2 595 aaPredicted RBP7.66□□□□□ -1.18
RNU4-78P-201ENST00000410940 ILDR1Q86SU0 546 aaPredicted RBP7.66□□□□□ -1.18
RNU4-78P-201ENST00000410940 SPOCK2Q92563 424 aa7.66□□□□□ -1.18
RNU4-78P-201ENST00000410940 VARS2Q5ST30 1063 aaKnown RBP7.65□□□□□ -1.18
RNU4-78P-201ENST00000410940 DOK7Q18PE1 504 aa7.64□□□□□ -1.19
RNU4-78P-201ENST00000410940 SPRYD3Q8NCJ5 442 aa7.64□□□□□ -1.19
RNU4-78P-201ENST00000410940 PAXIP1Q6ZW49 1069 aaPredicted RBP7.63□□□□□ -1.19
RNU4-78P-201ENST00000410940 KDM2AQ9Y2K7 1162 aa7.63□□□□□ -1.19
RNU4-78P-201ENST00000410940 ECM2O94769 699 aaPredicted RBP7.62□□□□□ -1.19
RNU4-78P-201ENST00000410940 PTGER2P43116 358 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 368.9 ms