RNA–Protein interactions for RNA: ENST00000410684.1

RN7SKP27-201, Transcript of RNA, 7SK small nuclear pseudogene 27, humanhuman

BASIC

Gene RN7SKP27, Length 333 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP27-201ENST00000410684 COL17A1Q9UMD9 1497 aaPredicted RBP8.6□□□□□ -1.03
RN7SKP27-201ENST00000410684 CEP170Q5SW79 1584 aa8.59□□□□□ -1.03
RN7SKP27-201ENST00000410684 PTPRMP28827 1452 aa8.58□□□□□ -1.04
RN7SKP27-201ENST00000410684 ABCC8Q09428 1581 aa8.57□□□□□ -1.04
RN7SKP27-201ENST00000410684 RAD54L2Q9Y4B4 1467 aa8.54□□□□□ -1.04
RN7SKP27-201ENST00000410684 MED1Q15648 1581 aaPredicted RBP8.53□□□□□ -1.04
RN7SKP27-201ENST00000410684 DNMBPQ6XZF7 1577 aa8.53□□□□□ -1.04
RN7SKP27-201ENST00000410684 PPRC1Q5VV67 1664 aaKnown RBP8.53□□□□□ -1.04
RN7SKP27-201ENST00000410684 POLA1P09884 1462 aaPredicted RBP8.51□□□□□ -1.05
RN7SKP27-201ENST00000410684 GRIN2BQ13224 1484 aa8.51□□□□□ -1.05
RN7SKP27-201ENST00000410684 PRDM2Q13029 1718 aa8.5□□□□□ -1.05
RN7SKP27-201ENST00000410684 SOGA1O94964 1423 aa8.49□□□□□ -1.05
RN7SKP27-201ENST00000410684 SRCAPQ6ZRS2 3230 aa8.49□□□□□ -1.05
RN7SKP27-201ENST00000410684 KIF21BO75037 1637 aa8.47□□□□□ -1.05
RN7SKP27-201ENST00000410684 SHROOM2Q13796 1616 aa8.47□□□□□ -1.05
RN7SKP27-201ENST00000410684 ADCY10Q96PN6 1610 aa8.47□□□□□ -1.05
RN7SKP27-201ENST00000410684 IFFO2Q5TF58 517 aa8.46□□□□□ -1.06
RN7SKP27-201ENST00000410684 WDR97A6NE52 1622 aa8.46□□□□□ -1.06
RN7SKP27-201ENST00000410684 PRG4Q92954 1404 aaPredicted RBP8.46□□□□□ -1.06
RN7SKP27-201ENST00000410684 WIZO95785 1651 aa8.44□□□□□ -1.06
RN7SKP27-201ENST00000410684 ADAMTSL3P82987 1691 aa8.44□□□□□ -1.06
RN7SKP27-201ENST00000410684 PLPPR3Q6T4P5 718 aa8.44□□□□□ -1.06
RN7SKP27-201ENST00000410684 DMRT2Q9Y5R5 561 aa8.44□□□□□ -1.06
RN7SKP27-201ENST00000410684 POTEHQ6S545 545 aa8.43□□□□□ -1.06
RN7SKP27-201ENST00000410684 UBAP1LF5GYI3 381 aa8.42□□□□□ -1.06
RN7SKP27-201ENST00000410684 GLI2P10070 1586 aa8.41□□□□□ -1.06
RN7SKP27-201ENST00000410684 TEX14Q8IWB6 1497 aa8.41□□□□□ -1.06
RN7SKP27-201ENST00000410684 GRIN2AQ12879 1464 aa8.4□□□□□ -1.06
RN7SKP27-201ENST00000410684 NUP160Q12769 1436 aa8.4□□□□□ -1.06
RN7SKP27-201ENST00000410684 IQSEC2Q5JU85 1478 aa8.39□□□□□ -1.07
RN7SKP27-201ENST00000410684 HSPA1LP34931 641 aa8.39□□□□□ -1.07
RN7SKP27-201ENST00000410684 PBRM1Q86U86 1689 aa8.38□□□□□ -1.07
RN7SKP27-201ENST00000410684 JPH4Q96JJ6 628 aa8.38□□□□□ -1.07
RN7SKP27-201ENST00000410684 MADDQ8WXG6 1647 aa8.37□□□□□ -1.07
RN7SKP27-201ENST00000410684 YEATS2Q9ULM3 1422 aa8.37□□□□□ -1.07
RN7SKP27-201ENST00000410684 ASXL2Q76L83 1435 aa8.36□□□□□ -1.07
RN7SKP27-201ENST00000410684 PLB1Q6P1J6 1458 aa8.35□□□□□ -1.07
RN7SKP27-201ENST00000410684 ARID4BQ4LE39 1312 aaPredicted RBP8.34□□□□□ -1.07
RN7SKP27-201ENST00000410684 SCAF1Q9H7N4 1312 aaKnown RBP8.34□□□□□ -1.07
RN7SKP27-201ENST00000410684 LTBP4Q8N2S1 1624 aa8.34□□□□□ -1.07
RN7SKP27-201ENST00000410684 MAP3K4Q9Y6R4 1608 aa8.33□□□□□ -1.08
RN7SKP27-201ENST00000410684 PTPRTO14522 1441 aa8.33□□□□□ -1.08
RN7SKP27-201ENST00000410684 RGS17Q9UGC6 210 aaPredicted RBP8.32□□□□□ -1.08
RN7SKP27-201ENST00000410684 RIMS1Q86UR5 1692 aaKnown RBP8.32□□□□□ -1.08
RN7SKP27-201ENST00000410684 FGD5Q6ZNL6 1462 aa8.32□□□□□ -1.08
RN7SKP27-201ENST00000410684 BCORL1Q5H9F3 1711 aa8.32□□□□□ -1.08
RN7SKP27-201ENST00000410684 STRCQ7RTU9 1775 aa8.31□□□□□ -1.08
RN7SKP27-201ENST00000410684 KIAA0586Q9BVV6 1533 aa8.29□□□□□ -1.08
RN7SKP27-201ENST00000410684 PIP4K2BP78356 416 aa8.29□□□□□ -1.08
RN7SKP27-201ENST00000410684 EPRSP07814 1512 aaKnown RBP8.29□□□□□ -1.08
RN7SKP27-201ENST00000410684 CFAP43Q8NDM7 1665 aa8.27□□□□□ -1.08
RN7SKP27-201ENST00000410684 TTBK1Q5TCY1 1321 aaPredicted RBP8.26□□□□□ -1.09
RN7SKP27-201ENST00000410684 ABCC2Q92887 1545 aa8.25□□□□□ -1.09
RN7SKP27-201ENST00000410684 POTEAQ6S8J7 498 aa8.24□□□□□ -1.09
RN7SKP27-201ENST00000410684 UPF1Q92900 1129 aaKnown RBP eCLIP8.24□□□□□ -1.09
RN7SKP27-201ENST00000410684 ADAMTS12P58397 1594 aa8.23□□□□□ -1.09
RN7SKP27-201ENST00000410684 TOP2AP11388 1531 aaKnown RBP8.23□□□□□ -1.09
RN7SKP27-201ENST00000410684 SETD1AO15047 1707 aaKnown RBP8.23□□□□□ -1.09
RN7SKP27-201ENST00000410684 CUL7Q14999 1698 aa8.21□□□□□ -1.09
RN7SKP27-201ENST00000410684 ABCA5Q8WWZ7 1642 aa8.2□□□□□ -1.1
RN7SKP27-201ENST00000410684 PREX1Q8TCU6 1659 aa8.2□□□□□ -1.1
RN7SKP27-201ENST00000410684 FHAD1B1AJZ9 1412 aa8.19□□□□□ -1.1
RN7SKP27-201ENST00000410684 PTPRGP23470 1445 aa8.19□□□□□ -1.1
RN7SKP27-201ENST00000410684 TOM1O60784 492 aa8.18□□□□□ -1.1
RN7SKP27-201ENST00000410684 ZNF335Q9H4Z2 1342 aaPredicted RBP8.18□□□□□ -1.1
RN7SKP27-201ENST00000410684 CD109Q6YHK3 1445 aa8.18□□□□□ -1.1
RN7SKP27-201ENST00000410684 CCDC88BA6NC98 1476 aa8.18□□□□□ -1.1
RN7SKP27-201ENST00000410684 MAGI3Q5TCQ9 1506 aa8.17□□□□□ -1.1
RN7SKP27-201ENST00000410684 PPP6R1Q9UPN7 881 aa8.15□□□□□ -1.1
RN7SKP27-201ENST00000410684 ARAP3Q8WWN8 1544 aa8.14□□□□□ -1.11
RN7SKP27-201ENST00000410684 UHRF1BP1Q6BDS2 1440 aa8.14□□□□□ -1.11
RN7SKP27-201ENST00000410684 RBM33Q96EV2 1170 aaKnown RBP8.14□□□□□ -1.11
RN7SKP27-201ENST00000410684 RUSC2Q8N2Y8 1516 aa8.13□□□□□ -1.11
RN7SKP27-201ENST00000410684 ABCA10Q8WWZ4 1543 aa8.13□□□□□ -1.11
RN7SKP27-201ENST00000410684 RAPGEF3O95398 923 aa8.13□□□□□ -1.11
RN7SKP27-201ENST00000410684 CEBPAP49715 358 aaPredicted RBP8.13□□□□□ -1.11
RN7SKP27-201ENST00000410684 MLECQ14165 292 aa8.13□□□□□ -1.11
RN7SKP27-201ENST00000410684 CUX1P39880 1505 aa8.13□□□□□ -1.11
RN7SKP27-201ENST00000410684 POGZQ7Z3K3 1410 aa8.12□□□□□ -1.11
RN7SKP27-201ENST00000410684 KCNH8Q96L42 1107 aa8.11□□□□□ -1.11
RN7SKP27-201ENST00000410684 TTC37Q6PGP7 1564 aa8.1□□□□□ -1.11
RN7SKP27-201ENST00000410684 UHRF1BP1LA0JNW5 1464 aa8.09□□□□□ -1.11
RN7SKP27-201ENST00000410684 FER1L4A9Z1Z3 1794 aa8.08□□□□□ -1.12
RN7SKP27-201ENST00000410684 ADRA2BP18089 450 aa8.08□□□□□ -1.12
RN7SKP27-201ENST00000410684 WDR7Q9Y4E6 1490 aa8.07□□□□□ -1.12
RN7SKP27-201ENST00000410684 UACAQ9BZF9 1416 aa8.07□□□□□ -1.12
RN7SKP27-201ENST00000410684 SETD1BQ9UPS6 1966 aaKnown RBP8.07□□□□□ -1.12
RN7SKP27-201ENST00000410684 KDM5BQ9UGL1 1544 aa8.07□□□□□ -1.12
RN7SKP27-201ENST00000410684 TNIKQ9UKE5 1360 aa8.07□□□□□ -1.12
RN7SKP27-201ENST00000410684 NCOA1Q15788 1441 aa8.06□□□□□ -1.12
RN7SKP27-201ENST00000410684 ZRANB1Q9UGI0 708 aa8.06□□□□□ -1.12
RN7SKP27-201ENST00000410684 ZCCHC11Q5TAX3 1644 aaKnown RBP8.06□□□□□ -1.12
RN7SKP27-201ENST00000410684 FANCAO15360 1455 aa8.06□□□□□ -1.12
RN7SKP27-201ENST00000410684 KIAA0556O60303 1618 aa8.05□□□□□ -1.12
RN7SKP27-201ENST00000410684 TRIM52Q96A61 297 aa8.04□□□□□ -1.12
RN7SKP27-201ENST00000410684 NCKAP5LQ9HCH0 1330 aa8.03□□□□□ -1.12
RN7SKP27-201ENST00000410684 SENP3-EIF4A1A0A087X0R7 540 aa8.02□□□□□ -1.13
RN7SKP27-201ENST00000410684 SETBP1Q9Y6X0 1596 aa8.01□□□□□ -1.13
RN7SKP27-201ENST00000410684 PHLDB1Q86UU1 1377 aa8.01□□□□□ -1.13
RN7SKP27-201ENST00000410684 ERICH3Q5RHP9 1530 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms