RNA–Protein interactions for RNA: ENST00000410662.1

RN7SKP235-201, Transcript of RNA, 7SK small nuclear pseudogene 235, humanhuman

BASIC

Gene RN7SKP235, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP235-201ENST00000410662 RNF25Q96BH1 459 aaPredicted RBP8.77□□□□□ -1.01
RN7SKP235-201ENST00000410662 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.77□□□□□ -1.01
RN7SKP235-201ENST00000410662 CHRM1P11229 460 aaPredicted RBP8.76□□□□□ -1.01
RN7SKP235-201ENST00000410662 CHADLQ6NUI6 762 aa8.75□□□□□ -1.01
RN7SKP235-201ENST00000410662 FXR2P51116 673 aaKnown RBP eCLIP8.74□□□□□ -1.01
RN7SKP235-201ENST00000410662 CHGAP10645 457 aaKnown RBP8.73□□□□□ -1.01
RN7SKP235-201ENST00000410662 TAOK2Q9UL54 1235 aa8.73□□□□□ -1.01
RN7SKP235-201ENST00000410662 FARP1Q9Y4F1 1045 aaPredicted RBP8.73□□□□□ -1.01
RN7SKP235-201ENST00000410662 RIOK3O14730 519 aaKnown RBP8.72□□□□□ -1.01
RN7SKP235-201ENST00000410662 HS6ST3Q8IZP7 471 aa8.72□□□□□ -1.01
RN7SKP235-201ENST00000410662 PRKAR2AP13861 404 aaKnown RBP8.71□□□□□ -1.02
RN7SKP235-201ENST00000410662 HAP1P54257 671 aaPredicted RBP8.71□□□□□ -1.02
RN7SKP235-201ENST00000410662 DNAJC5Q9H3Z4 198 aa8.7□□□□□ -1.02
RN7SKP235-201ENST00000410662 CHRDL2Q6WN34 429 aa8.69□□□□□ -1.02
RN7SKP235-201ENST00000410662 VGFO15240 615 aaPredicted RBP8.68□□□□□ -1.02
RN7SKP235-201ENST00000410662 PAXIP1Q6ZW49 1069 aaPredicted RBP8.68□□□□□ -1.02
RN7SKP235-201ENST00000410662 SGIP1Q9BQI5 828 aa8.67□□□□□ -1.02
RN7SKP235-201ENST00000410662 PYGBP11216 843 aa8.66□□□□□ -1.02
RN7SKP235-201ENST00000410662 SPRYD3Q8NCJ5 442 aa8.66□□□□□ -1.02
RN7SKP235-201ENST00000410662 CFAP44Q96MT7 982 aa8.65□□□□□ -1.02
RN7SKP235-201ENST00000410662 VSIG10Q8N0Z9 540 aa8.64□□□□□ -1.03
RN7SKP235-201ENST00000410662 PIP4P2Q8N4L2 257 aa8.64□□□□□ -1.03
RN7SKP235-201ENST00000410662 TSPYL2Q9H2G4 693 aaPredicted RBP8.64□□□□□ -1.03
RN7SKP235-201ENST00000410662 STK25O00506 426 aa8.61□□□□□ -1.03
RN7SKP235-201ENST00000410662 CCDC61Q9Y6R9 512 aa8.61□□□□□ -1.03
RN7SKP235-201ENST00000410662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.59□□□□□ -1.03
RN7SKP235-201ENST00000410662 ZNF467Q7Z7K2 595 aaPredicted RBP8.59□□□□□ -1.03
RN7SKP235-201ENST00000410662 ZFP91Q96JP5 570 aaPredicted RBP8.59□□□□□ -1.03
RN7SKP235-201ENST00000410662 PAK3O75914 559 aaPredicted RBP8.58□□□□□ -1.04
RN7SKP235-201ENST00000410662 NKX1-1Q15270 411 aaPredicted RBP8.57□□□□□ -1.04
RN7SKP235-201ENST00000410662 BCL11BQ9C0K0 894 aaPredicted RBP8.56□□□□□ -1.04
RN7SKP235-201ENST00000410662 STK24Q9Y6E0 443 aa8.55□□□□□ -1.04
RN7SKP235-201ENST00000410662 ZCCHC6Q5VYS8 1495 aaKnown RBP8.55□□□□□ -1.04
RN7SKP235-201ENST00000410662 ZNF579Q8NAF0 562 aaKnown RBP8.54□□□□□ -1.04
RN7SKP235-201ENST00000410662 GTPBP6O43824 516 aaPredicted RBP8.53□□□□□ -1.04
RN7SKP235-201ENST00000410662 PDAP1Q13442 181 aaKnown RBP8.53□□□□□ -1.04
RN7SKP235-201ENST00000410662 KDM2AQ9Y2K7 1162 aa8.53□□□□□ -1.04
RN7SKP235-201ENST00000410662 TSHZ2Q9NRE2 1034 aa8.52□□□□□ -1.05
RN7SKP235-201ENST00000410662 RYDENQ9NUL5 291 aaKnown RBP8.51□□□□□ -1.05
RN7SKP235-201ENST00000410662 NACADO15069 1562 aa8.5□□□□□ -1.05
RN7SKP235-201ENST00000410662 KIF12Q96FN5 646 aa8.5□□□□□ -1.05
RN7SKP235-201ENST00000410662 PCDHB8Q9UN66 801 aa8.5□□□□□ -1.05
RN7SKP235-201ENST00000410662 PCDHB13Q9Y5F0 798 aa8.5□□□□□ -1.05
RN7SKP235-201ENST00000410662 RB1CC1Q8TDY2 1594 aa8.49□□□□□ -1.05
RN7SKP235-201ENST00000410662 CD44P16070 742 aaKnown RBP8.48□□□□□ -1.05
RN7SKP235-201ENST00000410662 DCAF1Q9Y4B6 1507 aa8.48□□□□□ -1.05
RN7SKP235-201ENST00000410662 MAP3K13O43283 966 aa8.47□□□□□ -1.05
RN7SKP235-201ENST00000410662 PSEN1P49768 467 aa8.47□□□□□ -1.05
RN7SKP235-201ENST00000410662 IFNL1Q8IU54 200 aa8.47□□□□□ -1.05
RN7SKP235-201ENST00000410662 ZRANB1Q9UGI0 708 aa8.47□□□□□ -1.05
RN7SKP235-201ENST00000410662 MYO15BQ96JP2 1530 aa8.47□□□□□ -1.05
RN7SKP235-201ENST00000410662 BCANQ96GW7 911 aa8.44□□□□□ -1.06
RN7SKP235-201ENST00000410662 C19orf67A6NJJ6 358 aa8.42□□□□□ -1.06
RN7SKP235-201ENST00000410662 PHF12Q96QT6 1004 aa8.4□□□□□ -1.06
RN7SKP235-201ENST00000410662 UNC13AQ9UPW8 1703 aa8.39□□□□□ -1.07
RN7SKP235-201ENST00000410662 MFRPQ9BY79 579 aa8.38□□□□□ -1.07
RN7SKP235-201ENST00000410662 SOX12O15370 315 aa8.36□□□□□ -1.07
RN7SKP235-201ENST00000410662 EFCAB3Q8N7B9 438 aa8.35□□□□□ -1.07
RN7SKP235-201ENST00000410662 CABP2Q9NPB3 220 aa8.35□□□□□ -1.07
RN7SKP235-201ENST00000410662 NLRP6P59044 892 aa8.33□□□□□ -1.08
RN7SKP235-201ENST00000410662 FBXO22Q8NEZ5 403 aa8.33□□□□□ -1.08
RN7SKP235-201ENST00000410662 MS4A3Q96HJ5 214 aa8.33□□□□□ -1.08
RN7SKP235-201ENST00000410662 SCRIBQ14160 1630 aa8.3□□□□□ -1.08
RN7SKP235-201ENST00000410662 CLCN6P51797 869 aa8.3□□□□□ -1.08
RN7SKP235-201ENST00000410662 TMEM106CQ9BVX2 250 aa8.3□□□□□ -1.08
RN7SKP235-201ENST00000410662 TIE1P35590 1138 aa8.29□□□□□ -1.08
RN7SKP235-201ENST00000410662 PHF8Q9UPP1 1060 aa8.29□□□□□ -1.08
RN7SKP235-201ENST00000410662 TRPC6Q9Y210 931 aa8.29□□□□□ -1.08
RN7SKP235-201ENST00000410662 GOLGA2Q08379 1002 aa8.27□□□□□ -1.09
RN7SKP235-201ENST00000410662 BICRAQ9NZM4 1560 aa8.27□□□□□ -1.09
RN7SKP235-201ENST00000410662 HAX1O00165 279 aa8.26□□□□□ -1.09
RN7SKP235-201ENST00000410662 PPP1R37O75864 691 aa8.26□□□□□ -1.09
RN7SKP235-201ENST00000410662 CADPS2Q86UW7 1296 aa8.26□□□□□ -1.09
RN7SKP235-201ENST00000410662 TTLL13PA6NNM8 815 aa8.24□□□□□ -1.09
RN7SKP235-201ENST00000410662 NBR1Q14596 966 aa8.24□□□□□ -1.09
RN7SKP235-201ENST00000410662 MS4A4AQ96JQ5 239 aa8.24□□□□□ -1.09
RN7SKP235-201ENST00000410662 GALR2O43603 387 aaPredicted RBP8.23□□□□□ -1.09
RN7SKP235-201ENST00000410662 MKRN3Q13064 507 aaKnown RBP8.23□□□□□ -1.09
RN7SKP235-201ENST00000410662 BMP2KQ9NSY1 1161 aaPredicted RBP8.23□□□□□ -1.09
RN7SKP235-201ENST00000410662 EVX2Q03828 476 aa8.22□□□□□ -1.09
RN7SKP235-201ENST00000410662 ILDR1Q86SU0 546 aaPredicted RBP8.22□□□□□ -1.09
RN7SKP235-201ENST00000410662 P3H3Q8IVL6 736 aa8.22□□□□□ -1.09
RN7SKP235-201ENST00000410662 WDR70Q9NW82 654 aa8.21□□□□□ -1.1
RN7SKP235-201ENST00000410662 TRIM35Q9UPQ4 493 aa8.18□□□□□ -1.1
RN7SKP235-201ENST00000410662 SHROOM4Q9ULL8 1493 aa8.17□□□□□ -1.1
RN7SKP235-201ENST00000410662 POTEHQ6S545 545 aa8.16□□□□□ -1.1
RN7SKP235-201ENST00000410662 KCNV2Q8TDN2 545 aa8.15□□□□□ -1.1
RN7SKP235-201ENST00000410662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.15□□□□□ -1.1
RN7SKP235-201ENST00000410662 NCKAP5LQ9HCH0 1330 aa8.14□□□□□ -1.11
RN7SKP235-201ENST00000410662 ASTLQ6HA08 431 aaPredicted RBP8.14□□□□□ -1.11
RN7SKP235-201ENST00000410662 ATMINO43313 823 aaPredicted RBP8.13□□□□□ -1.11
RN7SKP235-201ENST00000410662 PDE4AP27815 886 aa8.13□□□□□ -1.11
RN7SKP235-201ENST00000410662 ATN1P54259 1190 aaPredicted RBP8.13□□□□□ -1.11
RN7SKP235-201ENST00000410662 CRISPLD2Q9H0B8 497 aa8.13□□□□□ -1.11
RN7SKP235-201ENST00000410662 PRKCSHP14314 528 aaPredicted RBP8.12□□□□□ -1.11
RN7SKP235-201ENST00000410662 MFSD10Q14728 455 aa8.12□□□□□ -1.11
RN7SKP235-201ENST00000410662 IER5LQ5T953 404 aa8.12□□□□□ -1.11
RN7SKP235-201ENST00000410662 E2F4Q16254 413 aa8.11□□□□□ -1.11
RN7SKP235-201ENST00000410662 TPRNQ4KMQ1 711 aa8.11□□□□□ -1.11
RN7SKP235-201ENST00000410662 GABBR2O75899 941 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms