RNA–Protein interactions for RNA: ENST00000410662.1

RN7SKP235-201, Transcript of RNA, 7SK small nuclear pseudogene 235, humanhuman

BASIC

Gene RN7SKP235, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP235-201ENST00000410662 AEBP2Q6ZN18 517 aaPredicted RBP16.34■□□□□ 0.21
RN7SKP235-201ENST00000410662 CHIC1Q5VXU3 224 aa16.27■□□□□ 0.2
RN7SKP235-201ENST00000410662 PHF23Q9BUL5 403 aaPredicted RBP14.32□□□□□ -0.12
RN7SKP235-201ENST00000410662 SENP3Q9H4L4 574 aaPredicted RBP13.85□□□□□ -0.19
RN7SKP235-201ENST00000410662 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
RN7SKP235-201ENST00000410662 FOXD1Q16676 465 aa12.79□□□□□ -0.36
RN7SKP235-201ENST00000410662 PPP6R1Q9UPN7 881 aa12.53□□□□□ -0.4
RN7SKP235-201ENST00000410662 ADRA2BP18089 450 aa12.52□□□□□ -0.41
RN7SKP235-201ENST00000410662 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
RN7SKP235-201ENST00000410662 KCNA4P22459 653 aa11.82□□□□□ -0.52
RN7SKP235-201ENST00000410662 PPP4R3CPQ6ZMV5 832 aa11.77□□□□□ -0.53
RN7SKP235-201ENST00000410662 MSH5O43196 834 aa11.72□□□□□ -0.53
RN7SKP235-201ENST00000410662 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
RN7SKP235-201ENST00000410662 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
RN7SKP235-201ENST00000410662 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
RN7SKP235-201ENST00000410662 NPM3O75607 178 aaKnown RBP11.39□□□□□ -0.59
RN7SKP235-201ENST00000410662 SLC4A1APQ9BWU0 796 aaKnown RBP11.3□□□□□ -0.6
RN7SKP235-201ENST00000410662 EHMT2Q96KQ7 1210 aa11.27□□□□□ -0.61
RN7SKP235-201ENST00000410662 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
RN7SKP235-201ENST00000410662 RNF216Q9NWF9 866 aaPredicted RBP11.11□□□□□ -0.63
RN7SKP235-201ENST00000410662 DNAJC5BQ9UF47 199 aa11.1□□□□□ -0.63
RN7SKP235-201ENST00000410662 DMRT2Q9Y5R5 561 aa11.1□□□□□ -0.63
RN7SKP235-201ENST00000410662 CSRNP3Q8WYN3 585 aa11.06□□□□□ -0.64
RN7SKP235-201ENST00000410662 HOXD11P31277 338 aaPredicted RBP11□□□□□ -0.65
RN7SKP235-201ENST00000410662 ZBTB22O15209 634 aa10.88□□□□□ -0.67
RN7SKP235-201ENST00000410662 FOXD4L1Q9NU39 408 aa10.82□□□□□ -0.68
RN7SKP235-201ENST00000410662 SLC4A2P04920 1241 aa10.68□□□□□ -0.7
RN7SKP235-201ENST00000410662 MYCNP04198 464 aaPredicted RBP10.53□□□□□ -0.72
RN7SKP235-201ENST00000410662 DCAF8L1A6NGE4 600 aa10.52□□□□□ -0.73
RN7SKP235-201ENST00000410662 ATXN8OSP0DMR3 200 aa10.44□□□□□ -0.74
RN7SKP235-201ENST00000410662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.43□□□□□ -0.74
RN7SKP235-201ENST00000410662 POTEDQ86YR6 584 aa10.37□□□□□ -0.75
RN7SKP235-201ENST00000410662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.31□□□□□ -0.76
RN7SKP235-201ENST00000410662 HNRNPUL2Q1KMD3 747 aaKnown RBP10.31□□□□□ -0.76
RN7SKP235-201ENST00000410662 U3KPZ7 1027 aaPredicted RBP10.31□□□□□ -0.76
RN7SKP235-201ENST00000410662 SAMD1Q6SPF0 538 aaPredicted RBP10.28□□□□□ -0.76
RN7SKP235-201ENST00000410662 NISCHQ9Y2I1 1504 aa10.26□□□□□ -0.77
RN7SKP235-201ENST00000410662 ATF5Q9Y2D1 282 aaPredicted RBP10.19□□□□□ -0.78
RN7SKP235-201ENST00000410662 APLP2Q06481 763 aa10.13□□□□□ -0.79
RN7SKP235-201ENST00000410662 RNF39Q9H2S5 420 aa10.06□□□□□ -0.8
RN7SKP235-201ENST00000410662 ZNF219Q9P2Y4 722 aaPredicted RBP10.02□□□□□ -0.81
RN7SKP235-201ENST00000410662 C1QBPQ07021 282 aaKnown RBP9.97□□□□□ -0.81
RN7SKP235-201ENST00000410662 FKBP8Q14318 412 aa9.96□□□□□ -0.82
RN7SKP235-201ENST00000410662 SPINK5Q9NQ38 1064 aaPredicted RBP9.92□□□□□ -0.82
RN7SKP235-201ENST00000410662 TRHP20396 242 aaPredicted RBP9.87□□□□□ -0.83
RN7SKP235-201ENST00000410662 CAPN15O75808 1086 aa9.86□□□□□ -0.83
RN7SKP235-201ENST00000410662 POLA2Q14181 598 aa9.8□□□□□ -0.84
RN7SKP235-201ENST00000410662 MKRN4PQ13434 485 aaPredicted RBP9.78□□□□□ -0.84
RN7SKP235-201ENST00000410662 FBLN2P98095 1184 aa9.76□□□□□ -0.85
RN7SKP235-201ENST00000410662 ZBTB12Q9Y330 459 aaPredicted RBP9.71□□□□□ -0.86
RN7SKP235-201ENST00000410662 SPDYE4A6NLX3 237 aa9.69□□□□□ -0.86
RN7SKP235-201ENST00000410662 ABCB7O75027 752 aa9.68□□□□□ -0.86
RN7SKP235-201ENST00000410662 DSG3P32926 999 aa9.67□□□□□ -0.86
RN7SKP235-201ENST00000410662 PROM2Q8N271 834 aa9.63□□□□□ -0.87
RN7SKP235-201ENST00000410662 AMER1Q5JTC6 1135 aaPredicted RBP9.62□□□□□ -0.87
RN7SKP235-201ENST00000410662 FBXO3Q9UK99 471 aa9.57□□□□□ -0.88
RN7SKP235-201ENST00000410662 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
RN7SKP235-201ENST00000410662 CACNB1Q02641 598 aaPredicted RBP9.54□□□□□ -0.88
RN7SKP235-201ENST00000410662 OSCARQ8IYS5 282 aa9.46□□□□□ -0.9
RN7SKP235-201ENST00000410662 SPDYE2BA6NHP3 402 aa9.45□□□□□ -0.9
RN7SKP235-201ENST00000410662 SPDYE6P0CI01 402 aa9.45□□□□□ -0.9
RN7SKP235-201ENST00000410662 SPDYE2Q495Y8 402 aa9.45□□□□□ -0.9
RN7SKP235-201ENST00000410662 ZNF692Q9BU19 519 aaPredicted RBP9.44□□□□□ -0.9
RN7SKP235-201ENST00000410662 SSUH2Q9Y2M2 353 aa9.42□□□□□ -0.9
RN7SKP235-201ENST00000410662 VASPP50552 380 aaPredicted RBP9.41□□□□□ -0.9
RN7SKP235-201ENST00000410662 PABPN1Q86U42 306 aaKnown RBP eCLIP9.32□□□□□ -0.92
RN7SKP235-201ENST00000410662 IFNLR1Q8IU57 520 aaPredicted RBP9.31□□□□□ -0.92
RN7SKP235-201ENST00000410662 STAG3Q9UJ98 1225 aa9.3□□□□□ -0.92
RN7SKP235-201ENST00000410662 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
RN7SKP235-201ENST00000410662 PLCD3Q8N3E9 789 aa9.16□□□□□ -0.94
RN7SKP235-201ENST00000410662 AKT1S1Q96B36 256 aa9.16□□□□□ -0.94
RN7SKP235-201ENST00000410662 MIER1Q8N108 512 aa9.14□□□□□ -0.95
RN7SKP235-201ENST00000410662 KLHL34Q8N239 644 aa9.14□□□□□ -0.95
RN7SKP235-201ENST00000410662 SPOCK2Q92563 424 aa9.14□□□□□ -0.95
RN7SKP235-201ENST00000410662 SLC24A1O60721 1099 aa9.12□□□□□ -0.95
RN7SKP235-201ENST00000410662 PKD2Q13563 968 aa9.11□□□□□ -0.95
RN7SKP235-201ENST00000410662 PLEKHG5O94827 1062 aa9.1□□□□□ -0.95
RN7SKP235-201ENST00000410662 SPDYE1Q8NFV5 336 aaPredicted RBP9.1□□□□□ -0.95
RN7SKP235-201ENST00000410662 ZBTB47Q9UFB7 747 aaPredicted RBP9.09□□□□□ -0.95
RN7SKP235-201ENST00000410662 CCDC180Q9P1Z9 1646 aa9.09□□□□□ -0.95
RN7SKP235-201ENST00000410662 REM2Q8IYK8 340 aaPredicted RBP9.05□□□□□ -0.96
RN7SKP235-201ENST00000410662 CLEC11AQ9Y240 323 aa9□□□□□ -0.97
RN7SKP235-201ENST00000410662 PRR29P0C7W0 189 aa8.99□□□□□ -0.97
RN7SKP235-201ENST00000410662 ECM2O94769 699 aaPredicted RBP8.98□□□□□ -0.97
RN7SKP235-201ENST00000410662 CREBZFQ9NS37 354 aa8.95□□□□□ -0.98
RN7SKP235-201ENST00000410662 PITPNM1O00562 1244 aa8.94□□□□□ -0.98
RN7SKP235-201ENST00000410662 DCAF8L2P0C7V8 631 aa8.93□□□□□ -0.98
RN7SKP235-201ENST00000410662 TRIM41Q8WV44 630 aa8.92□□□□□ -0.98
RN7SKP235-201ENST00000410662 CIZ1Q9ULV3 898 aaPredicted RBP8.92□□□□□ -0.98
RN7SKP235-201ENST00000410662 MNX1P50219 401 aaPredicted RBP8.91□□□□□ -0.98
RN7SKP235-201ENST00000410662 NUBP1P53384 320 aa8.91□□□□□ -0.98
RN7SKP235-201ENST00000410662 GSE1Q14687 1217 aa8.89□□□□□ -0.99
RN7SKP235-201ENST00000410662 RGL2O15211 777 aa8.88□□□□□ -0.99
RN7SKP235-201ENST00000410662 PLCB2Q00722 1185 aa8.88□□□□□ -0.99
RN7SKP235-201ENST00000410662 NPM1P06748 294 aaKnown RBP eCLIP8.82□□□□□ -1
RN7SKP235-201ENST00000410662 BBXQ8WY36 941 aaPredicted RBP8.82□□□□□ -1
RN7SKP235-201ENST00000410662 FAM212AQ96EL1 285 aa8.82□□□□□ -1
RN7SKP235-201ENST00000410662 DCAF8Q5TAQ9 597 aa8.81□□□□□ -1
RN7SKP235-201ENST00000410662 RASEFQ8IZ41 740 aa8.79□□□□□ -1
RN7SKP235-201ENST00000410662 ABCC9O60706 1549 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms