RNA–Protein interactions for RNA: ENST00000409643.5

PSMD1-203, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 5 BASIC

Gene PSMD1, Length 2,901 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-203ENST00000409643 CTTNBP2Q8WZ74 1663 aa16.45■□□□□ 0.22
PSMD1-203ENST00000409643 LRRC9Q6ZRR7 1453 aa16.44■□□□□ 0.22
PSMD1-203ENST00000409643 AQRO60306 1485 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■■■■□ 25.1
PSMD1-203ENST00000409643 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
PSMD1-203ENST00000409643 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
PSMD1-203ENST00000409643 FYCO1Q9BQS8 1478 aa16.41■□□□□ 0.22
PSMD1-203ENST00000409643 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
PSMD1-203ENST00000409643 PCF11O94913 1555 aaKnown RBP16.41■□□□□ 0.22
PSMD1-203ENST00000409643 ABCA5Q8WWZ7 1642 aa16.4■□□□□ 0.22
PSMD1-203ENST00000409643 ACIN1Q9UKV3 1341 aaKnown RBP16.38■□□□□ 0.21
PSMD1-203ENST00000409643 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
PSMD1-203ENST00000409643 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
PSMD1-203ENST00000409643 FMN1Q68DA7 1419 aa16.35■□□□□ 0.21
PSMD1-203ENST00000409643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.33■□□□□ 0.2
PSMD1-203ENST00000409643 GAPVD1Q14C86 1478 aa16.32■□□□□ 0.2
PSMD1-203ENST00000409643 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
PSMD1-203ENST00000409643 SAMD9Q5K651 1589 aa16.31■□□□□ 0.2
PSMD1-203ENST00000409643 PHLDB1Q86UU1 1377 aa16.3■□□□□ 0.2
PSMD1-203ENST00000409643 KIF21AQ7Z4S6 1674 aa16.29■□□□□ 0.2
PSMD1-203ENST00000409643 SETD5Q9C0A6 1442 aa16.28■□□□□ 0.2
PSMD1-203ENST00000409643 THOC2Q8NI27 1593 aaKnown RBP16.28■□□□□ 0.2
PSMD1-203ENST00000409643 RAB3GAP2Q9H2M9 1393 aa16.28■□□□□ 0.2
PSMD1-203ENST00000409643 NEUROD1Q13562 356 aa16.27■□□□□ 0.2
PSMD1-203ENST00000409643 TARBP1Q13395 1621 aaKnown RBP16.26■□□□□ 0.19
PSMD1-203ENST00000409643 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
PSMD1-203ENST00000409643 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
PSMD1-203ENST00000409643 P3H3Q8IVL6 736 aa16.24■□□□□ 0.19
PSMD1-203ENST00000409643 MAPKBP1O60336 1514 aa16.21■□□□□ 0.19
PSMD1-203ENST00000409643 ITGAEP38570 1179 aa16.21■□□□□ 0.19
PSMD1-203ENST00000409643 PBRM1Q86U86 1689 aa16.2■□□□□ 0.18
PSMD1-203ENST00000409643 GRIN2BQ13224 1484 aa16.19■□□□□ 0.18
PSMD1-203ENST00000409643 MIER1Q8N108 512 aa16.18■□□□□ 0.18
PSMD1-203ENST00000409643 FAM50AQ14320 339 aaKnown RBP16.18■□□□□ 0.18
PSMD1-203ENST00000409643 ATP1B4Q9UN42 357 aaPredicted RBP16.18■□□□□ 0.18
PSMD1-203ENST00000409643 FGD6Q6ZV73 1430 aa16.17■□□□□ 0.18
PSMD1-203ENST00000409643 MRC2Q9UBG0 1479 aa16.17■□□□□ 0.18
PSMD1-203ENST00000409643 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
PSMD1-203ENST00000409643 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
PSMD1-203ENST00000409643 EHBP1L1Q8N3D4 1523 aa16.16■□□□□ 0.18
PSMD1-203ENST00000409643 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
PSMD1-203ENST00000409643 CCDC18Q5T9S5 1454 aa16.15■□□□□ 0.18
PSMD1-203ENST00000409643 SUPT6HQ7KZ85 1726 aaKnown RBP16.14■□□□□ 0.18
PSMD1-203ENST00000409643 ADAMTS12P58397 1594 aa16.14■□□□□ 0.17
PSMD1-203ENST00000409643 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
PSMD1-203ENST00000409643 IQGAP2Q13576 1575 aa16.12■□□□□ 0.17
PSMD1-203ENST00000409643 GTF3C3Q9Y5Q9 886 aa16.11■□□□□ 0.17
PSMD1-203ENST00000409643 HECW1Q76N89 1606 aa16.11■□□□□ 0.17
PSMD1-203ENST00000409643 MYOM3Q5VTT5 1437 aa16.1■□□□□ 0.17
PSMD1-203ENST00000409643 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
PSMD1-203ENST00000409643 IFT140Q96RY7 1462 aa16.09■□□□□ 0.17
PSMD1-203ENST00000409643 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.17
PSMD1-203ENST00000409643 ARHGEF11O15085 1522 aa16.08■□□□□ 0.17
PSMD1-203ENST00000409643 HFM1A2PYH4 1435 aa16.07■□□□□ 0.16
PSMD1-203ENST00000409643 UGGT2Q9NYU1 1516 aa16.07■□□□□ 0.16
PSMD1-203ENST00000409643 WDR62O43379 1518 aa16.06■□□□□ 0.16
PSMD1-203ENST00000409643 PTPN23Q9H3S7 1636 aa16.04■□□□□ 0.16
PSMD1-203ENST00000409643 YTHDC1Q96MU7 727 aaKnown RBP16.02■□□□□ 0.16
PSMD1-203ENST00000409643 UACAQ9BZF9 1416 aa16.02■□□□□ 0.16
PSMD1-203ENST00000409643 TCOF1Q13428 1488 aaKnown RBP16.02■□□□□ 0.16
PSMD1-203ENST00000409643 EPRSP07814 1512 aaKnown RBP16■□□□□ 0.15
PSMD1-203ENST00000409643 AKNAQ7Z591 1439 aa15.99■□□□□ 0.15
PSMD1-203ENST00000409643 MAGI3Q5TCQ9 1506 aa15.98■□□□□ 0.15
PSMD1-203ENST00000409643 NAIPQ13075 1403 aa15.98■□□□□ 0.15
PSMD1-203ENST00000409643 MIA2Q96PC5 1412 aa15.98■□□□□ 0.15
PSMD1-203ENST00000409643 KIAA0586Q9BVV6 1533 aa15.98■□□□□ 0.15
PSMD1-203ENST00000409643 PTPRKQ15262 1439 aa15.98■□□□□ 0.15
PSMD1-203ENST00000409643 GCC2Q8IWJ2 1684 aa15.96■□□□□ 0.15
PSMD1-203ENST00000409643 SIN3AQ96ST3 1273 aa15.95■□□□□ 0.14
PSMD1-203ENST00000409643 KIAA0556O60303 1618 aa15.94■□□□□ 0.14
PSMD1-203ENST00000409643 PPP1R15AO75807 674 aaPredicted RBP15.93■□□□□ 0.14
PSMD1-203ENST00000409643 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
PSMD1-203ENST00000409643 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
PSMD1-203ENST00000409643 GRIN2AQ12879 1464 aa15.92■□□□□ 0.14
PSMD1-203ENST00000409643 TONSLQ96HA7 1378 aa15.91■□□□□ 0.14
PSMD1-203ENST00000409643 MAGI1Q96QZ7 1491 aaPredicted RBP15.9■□□□□ 0.14
PSMD1-203ENST00000409643 DISP1Q96F81 1524 aa15.89■□□□□ 0.13
PSMD1-203ENST00000409643 CDK13Q14004 1512 aaKnown RBP15.89■□□□□ 0.13
PSMD1-203ENST00000409643 RAPGEF6Q8TEU7 1601 aa15.87■□□□□ 0.13
PSMD1-203ENST00000409643 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
PSMD1-203ENST00000409643 ROCK1Q13464 1354 aa15.84■□□□□ 0.13
PSMD1-203ENST00000409643 SYNJ2O15056 1496 aa15.83■□□□□ 0.13
PSMD1-203ENST00000409643 CDK11AQ9UQ88 783 aaPredicted RBP15.83■□□□□ 0.12
PSMD1-203ENST00000409643 NUP153P49790 1475 aaKnown RBP15.83■□□□□ 0.12
PSMD1-203ENST00000409643 DNMT1P26358 1616 aaKnown RBP15.81■□□□□ 0.12
PSMD1-203ENST00000409643 DAPK1P53355 1430 aa15.78■□□□□ 0.12
PSMD1-203ENST00000409643 ITSN2Q9NZM3 1697 aa15.78■□□□□ 0.12
PSMD1-203ENST00000409643 CEP170Q5SW79 1584 aa15.78■□□□□ 0.12
PSMD1-203ENST00000409643 KDM5BQ9UGL1 1544 aa15.77■□□□□ 0.12
PSMD1-203ENST00000409643 RRP7BPQ9NSQ0 103 aa15.77■□□□□ 0.12
PSMD1-203ENST00000409643 ADCY10Q96PN6 1610 aa15.77■□□□□ 0.12
PSMD1-203ENST00000409643 CARMIL2Q6F5E8 1435 aa15.77■□□□□ 0.11
PSMD1-203ENST00000409643 NUP160Q12769 1436 aa15.76■□□□□ 0.11
PSMD1-203ENST00000409643 TROQ12816 1431 aaPredicted RBP15.76■□□□□ 0.11
PSMD1-203ENST00000409643 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
PSMD1-203ENST00000409643 CCER2I3L3R5 266 aa15.75■□□□□ 0.11
PSMD1-203ENST00000409643 DENND4BO75064 1496 aaPredicted RBP15.75■□□□□ 0.11
PSMD1-203ENST00000409643 CHMP7Q8WUX9 453 aaPredicted RBP15.74■□□□□ 0.11
PSMD1-203ENST00000409643 KDM6BO15054 1643 aa15.74■□□□□ 0.11
PSMD1-203ENST00000409643 CHIC2Q9UKJ5 165 aa15.74■□□□□ 0.11
PSMD1-203ENST00000409643 ABCC5O15440 1437 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms