RNA–Protein interactions for RNA: ENST00000409556.5

KDM3A-203, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene KDM3A, Length 4,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-203ENST00000409556 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
KDM3A-203ENST00000409556 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.91
KDM3A-203ENST00000409556 DAXXQ9UER7 740 aaPredicted RBP20.75■□□□□ 0.91
KDM3A-203ENST00000409556 ARID4BQ4LE39 1312 aaPredicted RBP20.75■□□□□ 0.91
KDM3A-203ENST00000409556 CARMIL2Q6F5E8 1435 aa20.74■□□□□ 0.91
KDM3A-203ENST00000409556 KDM2AQ9Y2K7 1162 aa20.73■□□□□ 0.91
KDM3A-203ENST00000409556 SLC24A1O60721 1099 aa20.72■□□□□ 0.91
KDM3A-203ENST00000409556 CCNB3Q8WWL7 1395 aa20.69■□□□□ 0.9
KDM3A-203ENST00000409556 CLSPNQ9HAW4 1339 aa20.67■□□□□ 0.9
KDM3A-203ENST00000409556 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
KDM3A-203ENST00000409556 TRHP20396 242 aaPredicted RBP20.66■□□□□ 0.9
KDM3A-203ENST00000409556 PPP1R15AO75807 674 aaPredicted RBP20.66■□□□□ 0.9
KDM3A-203ENST00000409556 NCAPD3P42695 1498 aa20.58■□□□□ 0.88
KDM3A-203ENST00000409556 CANXP27824 592 aaKnown RBP20.56■□□□□ 0.88
KDM3A-203ENST00000409556 RGL3Q3MIN7 710 aa20.55■□□□□ 0.88
KDM3A-203ENST00000409556 ZBTB47Q9UFB7 747 aaPredicted RBP20.55■□□□□ 0.88
KDM3A-203ENST00000409556 RAPGEF2Q9Y4G8 1499 aa20.53■□□□□ 0.88
KDM3A-203ENST00000409556 DDX10Q13206 875 aaKnown RBP20.53■□□□□ 0.88
KDM3A-203ENST00000409556 FMN1Q68DA7 1419 aa20.53■□□□□ 0.88
KDM3A-203ENST00000409556 VPS8Q8N3P4 1428 aa20.5■□□□□ 0.87
KDM3A-203ENST00000409556 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
KDM3A-203ENST00000409556 JPH4Q96JJ6 628 aa20.48■□□□□ 0.87
KDM3A-203ENST00000409556 EIF4G2P78344 907 aaKnown RBP eCLIP20.48■□□□□ 0.87
KDM3A-203ENST00000409556 C14orf37Q86TY3 774 aa20.46■□□□□ 0.87
KDM3A-203ENST00000409556 EFCAB2Q5VUJ9 269 aa20.42■□□□□ 0.86
KDM3A-203ENST00000409556 KANK1Q14678 1352 aa20.41■□□□□ 0.86
KDM3A-203ENST00000409556 ARHGAP35Q9NRY4 1499 aa20.4■□□□□ 0.86
KDM3A-203ENST00000409556 SCAF1Q9H7N4 1312 aaKnown RBP20.39■□□□□ 0.86
KDM3A-203ENST00000409556 TMC1Q8TDI8 760 aa20.39■□□□□ 0.86
KDM3A-203ENST00000409556 MLECQ14165 292 aa20.38■□□□□ 0.85
KDM3A-203ENST00000409556 OSCARQ8IYS5 282 aa20.36■□□□□ 0.85
KDM3A-203ENST00000409556 FAM9BQ8IZU0 186 aa20.35■□□□□ 0.85
KDM3A-203ENST00000409556 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
KDM3A-203ENST00000409556 FHOD3Q2V2M9 1422 aa20.35■□□□□ 0.85
KDM3A-203ENST00000409556 HIRIP3Q9BW71 556 aaPredicted RBP20.34■□□□□ 0.85
KDM3A-203ENST00000409556 KANK4Q5T7N3 995 aaPredicted RBP20.34■□□□□ 0.85
KDM3A-203ENST00000409556 WDR43Q15061 677 aaKnown RBP eCLIP20.32■□□□□ 0.84
KDM3A-203ENST00000409556 CDCA8Q53HL2 280 aa20.32■□□□□ 0.84
KDM3A-203ENST00000409556 GAPVD1Q14C86 1478 aa20.31■□□□□ 0.84
KDM3A-203ENST00000409556 GGT6Q6P531 493 aa20.31■□□□□ 0.84
KDM3A-203ENST00000409556 CARD11Q9BXL7 1154 aa20.31■□□□□ 0.84
KDM3A-203ENST00000409556 HNRNPUQ00839 825 aaKnown RBP eCLIP20.3■□□□□ 0.84
KDM3A-203ENST00000409556 BCL11AQ9H165 835 aa20.3■□□□□ 0.84
KDM3A-203ENST00000409556 HDGFP51858 240 aaKnown RBP20.27■□□□□ 0.84
KDM3A-203ENST00000409556 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
KDM3A-203ENST00000409556 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
KDM3A-203ENST00000409556 MRS2Q9HD23 443 aa20.27■□□□□ 0.83
KDM3A-203ENST00000409556 PTPRGP23470 1445 aa20.26■□□□□ 0.83
KDM3A-203ENST00000409556 POGKQ9P215 609 aa20.25■□□□□ 0.83
KDM3A-203ENST00000409556 SALL2Q9Y467 1007 aaPredicted RBP20.25■□□□□ 0.83
KDM3A-203ENST00000409556 SIN3AQ96ST3 1273 aa20.24■□□□□ 0.83
KDM3A-203ENST00000409556 PLEKHG5O94827 1062 aa20.23■□□□□ 0.83
KDM3A-203ENST00000409556 CYB5RLQ6IPT4 315 aa20.23■□□□□ 0.83
KDM3A-203ENST00000409556 RUSC2Q8N2Y8 1516 aa20.23■□□□□ 0.83
KDM3A-203ENST00000409556 CCDC18Q5T9S5 1454 aa20.22■□□□□ 0.83
KDM3A-203ENST00000409556 ZBTB7CA1YPR0 619 aa20.22■□□□□ 0.83
KDM3A-203ENST00000409556 IGF1RP08069 1367 aa20.22■□□□□ 0.83
KDM3A-203ENST00000409556 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
KDM3A-203ENST00000409556 ANKRD30AQ9BXX3 1397 aa20.21■□□□□ 0.83
KDM3A-203ENST00000409556 RSPH4AQ5TD94 716 aa20.2■□□□□ 0.82
KDM3A-203ENST00000409556 CFTRP13569 1480 aa20.2■□□□□ 0.82
KDM3A-203ENST00000409556 SETD5Q9C0A6 1442 aa20.2■□□□□ 0.82
KDM3A-203ENST00000409556 HAP1P54257 671 aaPredicted RBP20.18■□□□□ 0.82
KDM3A-203ENST00000409556 DCAF11Q8TEB1 546 aa20.18■□□□□ 0.82
KDM3A-203ENST00000409556 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
KDM3A-203ENST00000409556 KNSTRNQ9Y448 316 aa20.17■□□□□ 0.82
KDM3A-203ENST00000409556 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.823e-7■■■■□ 20.7
KDM3A-203ENST00000409556 PKD2Q13563 968 aa20.17■□□□□ 0.82
KDM3A-203ENST00000409556 SPAG9O60271 1321 aaKnown RBP20.16■□□□□ 0.82
KDM3A-203ENST00000409556 HNRNPMP52272 730 aaKnown RBP eCLIP20.16■□□□□ 0.823e-8■■■■□ 20.7
KDM3A-203ENST00000409556 NESP48681 1621 aa20.15■□□□□ 0.82
KDM3A-203ENST00000409556 KIF3BO15066 747 aa20.13■□□□□ 0.81
KDM3A-203ENST00000409556 CFAP53Q96M91 514 aa20.12■□□□□ 0.81
KDM3A-203ENST00000409556 NUP155O75694 1391 aa20.12■□□□□ 0.81
KDM3A-203ENST00000409556 A0A0G2JS52 829 aa20.12■□□□□ 0.81
KDM3A-203ENST00000409556 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
KDM3A-203ENST00000409556 TIMELESSQ9UNS1 1208 aa20.11■□□□□ 0.81
KDM3A-203ENST00000409556 GRIN2BQ13224 1484 aa20.09■□□□□ 0.81
KDM3A-203ENST00000409556 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.08■□□□□ 0.8
KDM3A-203ENST00000409556 LMOD2Q6P5Q4 547 aa20.07■□□□□ 0.8
KDM3A-203ENST00000409556 NPM2Q86SE8 214 aaKnown RBP20.06■□□□□ 0.8
KDM3A-203ENST00000409556 PPM1GO15355 546 aaPredicted RBP20.05■□□□□ 0.8
KDM3A-203ENST00000409556 MPHOSPH9Q99550 1183 aa20.05■□□□□ 0.8
KDM3A-203ENST00000409556 BICRAQ9NZM4 1560 aa20.04■□□□□ 0.8
KDM3A-203ENST00000409556 TMF1P82094 1093 aa20.03■□□□□ 0.8
KDM3A-203ENST00000409556 FOXD1Q16676 465 aa20.02■□□□□ 0.8
KDM3A-203ENST00000409556 WASHC2CQ9Y4E1 1318 aa20.02■□□□□ 0.79
KDM3A-203ENST00000409556 IFT140Q96RY7 1462 aa20.01■□□□□ 0.79
KDM3A-203ENST00000409556 RAB3GAP2Q9H2M9 1393 aa20.01■□□□□ 0.79
KDM3A-203ENST00000409556 RTL5Q5HYW3 569 aaPredicted RBP20.01■□□□□ 0.79
KDM3A-203ENST00000409556 MIER1Q8N108 512 aa20.01■□□□□ 0.79
KDM3A-203ENST00000409556 SRPK2P78362 688 aaKnown RBP19.97■□□□□ 0.79
KDM3A-203ENST00000409556 FKBP8Q14318 412 aa19.97■□□□□ 0.79
KDM3A-203ENST00000409556 TOPBP1Q92547 1522 aa19.96■□□□□ 0.79
KDM3A-203ENST00000409556 NUDCQ9Y266 331 aa19.96■□□□□ 0.79
KDM3A-203ENST00000409556 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
KDM3A-203ENST00000409556 SAFB2Q14151 953 aaKnown RBP eCLIP19.95■□□□□ 0.78
KDM3A-203ENST00000409556 STK26Q9P289 416 aa19.95■□□□□ 0.78
KDM3A-203ENST00000409556 FAM69CQ0P6D2 419 aa19.92■□□□□ 0.78
KDM3A-203ENST00000409556 EID1Q9Y6B2 187 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms