RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 C19orf67A6NJJ6 358 aa9.91□□□□□ -0.82
GTF3C3-202ENST00000409364 UBTFP17480 764 aaKnown RBP9.91□□□□□ -0.82
GTF3C3-202ENST00000409364 TRIM26Q12899 539 aaPredicted RBP9.88□□□□□ -0.83
GTF3C3-202ENST00000409364 PCGF6Q9BYE7 350 aa9.88□□□□□ -0.83
GTF3C3-202ENST00000409364 ZBTB12Q9Y330 459 aaPredicted RBP9.88□□□□□ -0.83
GTF3C3-202ENST00000409364 CUX1P39880 1505 aa9.88□□□□□ -0.83
GTF3C3-202ENST00000409364 BIVM-ERCC5R4GMW8 1640 aa9.88□□□□□ -0.83
GTF3C3-202ENST00000409364 GOLGA3Q08378 1498 aa9.87□□□□□ -0.83
GTF3C3-202ENST00000409364 CEP164Q9UPV0 1460 aa9.87□□□□□ -0.83
GTF3C3-202ENST00000409364 FANCD2Q9BXW9 1451 aa9.86□□□□□ -0.83
GTF3C3-202ENST00000409364 KIF27Q86VH2 1401 aa9.85□□□□□ -0.83
GTF3C3-202ENST00000409364 NESP48681 1621 aa9.85□□□□□ -0.83
GTF3C3-202ENST00000409364 SLC4A2P04920 1241 aa9.85□□□□□ -0.83
GTF3C3-202ENST00000409364 POTEGQ6S5H5 508 aa9.84□□□□□ -0.83
GTF3C3-202ENST00000409364 PDS5BQ9NTI5 1447 aa9.83□□□□□ -0.84
GTF3C3-202ENST00000409364 CEP162Q5TB80 1403 aa9.82□□□□□ -0.84
GTF3C3-202ENST00000409364 LAMC3Q9Y6N6 1575 aa9.82□□□□□ -0.84
GTF3C3-202ENST00000409364 PRDM2Q13029 1718 aa9.81□□□□□ -0.84
GTF3C3-202ENST00000409364 KIF21BO75037 1637 aa9.8□□□□□ -0.84
GTF3C3-202ENST00000409364 PRXQ9BXM0 1461 aa9.79□□□□□ -0.84
GTF3C3-202ENST00000409364 IGF1RP08069 1367 aa9.77□□□□□ -0.84
GTF3C3-202ENST00000409364 PRKAR2AP13861 404 aaKnown RBP9.77□□□□□ -0.85
GTF3C3-202ENST00000409364 FGD5Q6ZNL6 1462 aa9.77□□□□□ -0.85
GTF3C3-202ENST00000409364 RAPGEF2Q9Y4G8 1499 aa9.77□□□□□ -0.85
GTF3C3-202ENST00000409364 CUX2O14529 1486 aa9.76□□□□□ -0.85
GTF3C3-202ENST00000409364 TOPBP1Q92547 1522 aa9.75□□□□□ -0.85
GTF3C3-202ENST00000409364 DNMBPQ6XZF7 1577 aa9.75□□□□□ -0.85
GTF3C3-202ENST00000409364 ERICH3Q5RHP9 1530 aa9.75□□□□□ -0.85
GTF3C3-202ENST00000409364 CLIP1P30622 1438 aa9.74□□□□□ -0.85
GTF3C3-202ENST00000409364 CLCN6P51797 869 aa9.73□□□□□ -0.85
GTF3C3-202ENST00000409364 CARMIL1Q5VZK9 1371 aa9.73□□□□□ -0.85
GTF3C3-202ENST00000409364 POLA1P09884 1462 aaPredicted RBP9.71□□□□□ -0.85
GTF3C3-202ENST00000409364 ABCA10Q8WWZ4 1543 aa9.71□□□□□ -0.86
GTF3C3-202ENST00000409364 POTEIP0CG38 1075 aa9.7□□□□□ -0.86
GTF3C3-202ENST00000409364 HRCP23327 699 aa9.7□□□□□ -0.86
GTF3C3-202ENST00000409364 URB2Q14146 1524 aaKnown RBP9.7□□□□□ -0.86
GTF3C3-202ENST00000409364 RAD54L2Q9Y4B4 1467 aa9.69□□□□□ -0.86
GTF3C3-202ENST00000409364 PPARGC1BQ86YN6 1023 aaKnown RBP9.69□□□□□ -0.86
GTF3C3-202ENST00000409364 KIF21AQ7Z4S6 1674 aa9.68□□□□□ -0.86
GTF3C3-202ENST00000409364 RANGAP1P46060 587 aaPredicted RBP9.67□□□□□ -0.86
GTF3C3-202ENST00000409364 VPS8Q8N3P4 1428 aa9.66□□□□□ -0.86
GTF3C3-202ENST00000409364 OSCARQ8IYS5 282 aa9.66□□□□□ -0.86
GTF3C3-202ENST00000409364 TDRD9Q8NDG6 1382 aaKnown RBP9.64□□□□□ -0.87
GTF3C3-202ENST00000409364 ERCC6Q03468 1493 aa9.63□□□□□ -0.87
GTF3C3-202ENST00000409364 MRC2Q9UBG0 1479 aa9.63□□□□□ -0.87
GTF3C3-202ENST00000409364 GAPVD1Q14C86 1478 aa9.61□□□□□ -0.87
GTF3C3-202ENST00000409364 OTUD5Q96G74 571 aa9.61□□□□□ -0.87
GTF3C3-202ENST00000409364 DCBLD2Q96PD2 775 aa9.61□□□□□ -0.87
GTF3C3-202ENST00000409364 ZEB1P37275 1124 aaPredicted RBP9.59□□□□□ -0.87
GTF3C3-202ENST00000409364 THOC2Q8NI27 1593 aaKnown RBP9.58□□□□□ -0.88
GTF3C3-202ENST00000409364 TTBK1Q5TCY1 1321 aaPredicted RBP9.57□□□□□ -0.88
GTF3C3-202ENST00000409364 ARAP1Q96P48 1450 aa9.57□□□□□ -0.88
GTF3C3-202ENST00000409364 ARHGAP35Q9NRY4 1499 aa9.57□□□□□ -0.88
GTF3C3-202ENST00000409364 IFT140Q96RY7 1462 aa9.56□□□□□ -0.88
GTF3C3-202ENST00000409364 CUL7Q14999 1698 aa9.55□□□□□ -0.88
GTF3C3-202ENST00000409364 WDR62O43379 1518 aa9.55□□□□□ -0.88
GTF3C3-202ENST00000409364 TARBP1Q13395 1621 aaKnown RBP9.55□□□□□ -0.88
GTF3C3-202ENST00000409364 ABCA5Q8WWZ7 1642 aa9.53□□□□□ -0.88
GTF3C3-202ENST00000409364 SPDYE1Q8NFV5 336 aaPredicted RBP9.53□□□□□ -0.88
GTF3C3-202ENST00000409364 AQRO60306 1485 aaKnown RBP eCLIP9.53□□□□□ -0.881e-6■■■■□ 26.1
GTF3C3-202ENST00000409364 FHAD1B1AJZ9 1412 aa9.52□□□□□ -0.88
GTF3C3-202ENST00000409364 WDR97A6NE52 1622 aa9.52□□□□□ -0.89
GTF3C3-202ENST00000409364 GRIN2BQ13224 1484 aa9.52□□□□□ -0.89
GTF3C3-202ENST00000409364 P3H3Q8IVL6 736 aa9.51□□□□□ -0.89
GTF3C3-202ENST00000409364 KANK4Q5T7N3 995 aaPredicted RBP9.5□□□□□ -0.89
GTF3C3-202ENST00000409364 CLEC11AQ9Y240 323 aa9.48□□□□□ -0.89
GTF3C3-202ENST00000409364 EFCAB5A4FU69 1503 aa9.47□□□□□ -0.89
GTF3C3-202ENST00000409364 MAP3K1Q13233 1512 aa9.47□□□□□ -0.89
GTF3C3-202ENST00000409364 CCER1Q8TC90 406 aaPredicted RBP9.47□□□□□ -0.89
GTF3C3-202ENST00000409364 ZNF608Q9ULD9 1512 aaPredicted RBP9.46□□□□□ -0.89
GTF3C3-202ENST00000409364 FMN1Q68DA7 1419 aa9.46□□□□□ -0.9
GTF3C3-202ENST00000409364 ATP1B4Q9UN42 357 aaPredicted RBP9.45□□□□□ -0.9
GTF3C3-202ENST00000409364 MYCNP04198 464 aaPredicted RBP9.44□□□□□ -0.9
GTF3C3-202ENST00000409364 CHMP7Q8WUX9 453 aaPredicted RBP9.44□□□□□ -0.9
GTF3C3-202ENST00000409364 FHOD3Q2V2M9 1422 aa9.44□□□□□ -0.9
GTF3C3-202ENST00000409364 CASKIN1Q8WXD9 1431 aa9.44□□□□□ -0.9
GTF3C3-202ENST00000409364 ADAMTS12P58397 1594 aa9.41□□□□□ -0.9
GTF3C3-202ENST00000409364 MAGI1Q96QZ7 1491 aaPredicted RBP9.4□□□□□ -0.9
GTF3C3-202ENST00000409364 FYCO1Q9BQS8 1478 aa9.4□□□□□ -0.9
GTF3C3-202ENST00000409364 CD44P16070 742 aaKnown RBP9.4□□□□□ -0.9
GTF3C3-202ENST00000409364 CTTNBP2Q8WZ74 1663 aa9.4□□□□□ -0.9
GTF3C3-202ENST00000409364 KIAA0586Q9BVV6 1533 aa9.4□□□□□ -0.9
GTF3C3-202ENST00000409364 SNAPC4Q5SXM2 1469 aa9.4□□□□□ -0.9
GTF3C3-202ENST00000409364 RRBP1Q9P2E9 1410 aaKnown RBP9.4□□□□□ -0.91
GTF3C3-202ENST00000409364 SPDYE2BA6NHP3 402 aa9.39□□□□□ -0.91
GTF3C3-202ENST00000409364 SPDYE6P0CI01 402 aa9.39□□□□□ -0.91
GTF3C3-202ENST00000409364 SPDYE2Q495Y8 402 aa9.39□□□□□ -0.91
GTF3C3-202ENST00000409364 LRRC9Q6ZRR7 1453 aa9.39□□□□□ -0.91
GTF3C3-202ENST00000409364 PBRM1Q86U86 1689 aa9.39□□□□□ -0.91
GTF3C3-202ENST00000409364 TIAM1Q13009 1591 aa9.39□□□□□ -0.91
GTF3C3-202ENST00000409364 CCNB3Q8WWL7 1395 aa9.38□□□□□ -0.91
GTF3C3-202ENST00000409364 FBLN2P98095 1184 aa9.38□□□□□ -0.91
GTF3C3-202ENST00000409364 SAMD9Q5K651 1589 aa9.38□□□□□ -0.91
GTF3C3-202ENST00000409364 SYNJ2O15056 1496 aa9.37□□□□□ -0.91
GTF3C3-202ENST00000409364 GRIN2AQ12879 1464 aa9.37□□□□□ -0.91
GTF3C3-202ENST00000409364 EIF4G3O43432 1585 aaKnown RBP9.36□□□□□ -0.91
GTF3C3-202ENST00000409364 IQGAP2Q13576 1575 aa9.36□□□□□ -0.91
GTF3C3-202ENST00000409364 UGGT2Q9NYU1 1516 aa9.36□□□□□ -0.91
GTF3C3-202ENST00000409364 JPH4Q96JJ6 628 aa9.34□□□□□ -0.91
GTF3C3-202ENST00000409364 MTUS2Q5JR59 1369 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms