RNA–Protein interactions for RNA: ENST00000409114.7

PBRM1-206, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-206ENST00000409114 CYB5RLQ6IPT4 315 aa11.44□□□□□ -0.58
PBRM1-206ENST00000409114 GOLGA3Q08378 1498 aa11.43□□□□□ -0.58
PBRM1-206ENST00000409114 KANK1Q14678 1352 aa11.43□□□□□ -0.58
PBRM1-206ENST00000409114 ATAD2BQ9ULI0 1458 aa11.42□□□□□ -0.58
PBRM1-206ENST00000409114 TDRD9Q8NDG6 1382 aaKnown RBP11.42□□□□□ -0.58
PBRM1-206ENST00000409114 MLECQ14165 292 aa11.41□□□□□ -0.58
PBRM1-206ENST00000409114 A0A0G2JS52 829 aa11.4□□□□□ -0.58
PBRM1-206ENST00000409114 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.58
PBRM1-206ENST00000409114 TONSLQ96HA7 1378 aa11.4□□□□□ -0.58
PBRM1-206ENST00000409114 EFCAB2Q5VUJ9 269 aa11.4□□□□□ -0.59
PBRM1-206ENST00000409114 FHAD1B1AJZ9 1412 aa11.39□□□□□ -0.59
PBRM1-206ENST00000409114 CCNB3Q8WWL7 1395 aa11.39□□□□□ -0.59
PBRM1-206ENST00000409114 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-206ENST00000409114 FANCD2Q9BXW9 1451 aa11.36□□□□□ -0.59
PBRM1-206ENST00000409114 ANP32CO43423 234 aa11.35□□□□□ -0.59
PBRM1-206ENST00000409114 JPH4Q96JJ6 628 aa11.35□□□□□ -0.59
PBRM1-206ENST00000409114 MROH2BQ7Z745 1585 aa11.34□□□□□ -0.59
PBRM1-206ENST00000409114 CLSPNQ9HAW4 1339 aa11.33□□□□□ -0.6
PBRM1-206ENST00000409114 CCDC88BA6NC98 1476 aa11.33□□□□□ -0.6
PBRM1-206ENST00000409114 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
PBRM1-206ENST00000409114 ZBTB7CA1YPR0 619 aa11.31□□□□□ -0.6
PBRM1-206ENST00000409114 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
PBRM1-206ENST00000409114 NCAPD3P42695 1498 aa11.3□□□□□ -0.6
PBRM1-206ENST00000409114 DIEXFQ68CQ4 756 aaKnown RBP11.29□□□□□ -0.6
PBRM1-206ENST00000409114 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
PBRM1-206ENST00000409114 CDCA8Q53HL2 280 aa11.29□□□□□ -0.6
PBRM1-206ENST00000409114 RRP7BPQ9NSQ0 103 aa11.29□□□□□ -0.6
PBRM1-206ENST00000409114 POGKQ9P215 609 aa11.29□□□□□ -0.6
PBRM1-206ENST00000409114 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
PBRM1-206ENST00000409114 GGT6Q6P531 493 aa11.28□□□□□ -0.6
PBRM1-206ENST00000409114 LMOD2Q6P5Q4 547 aa11.28□□□□□ -0.6
PBRM1-206ENST00000409114 EID1Q9Y6B2 187 aa11.28□□□□□ -0.6
PBRM1-206ENST00000409114 RSPH4AQ5TD94 716 aa11.26□□□□□ -0.61
PBRM1-206ENST00000409114 SMARCA4P51532 1647 aa11.26□□□□□ -0.61
PBRM1-206ENST00000409114 PTPRGP23470 1445 aa11.26□□□□□ -0.61
PBRM1-206ENST00000409114 FMN1Q68DA7 1419 aa11.25□□□□□ -0.61
PBRM1-206ENST00000409114 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
PBRM1-206ENST00000409114 FAM69CQ0P6D2 419 aa11.23□□□□□ -0.61
PBRM1-206ENST00000409114 TNIKQ9UKE5 1360 aa11.23□□□□□ -0.61
PBRM1-206ENST00000409114 RGL3Q3MIN7 710 aa11.21□□□□□ -0.61
PBRM1-206ENST00000409114 SENP3Q9H4L4 574 aaPredicted RBP11.21□□□□□ -0.62
PBRM1-206ENST00000409114 TMC1Q8TDI8 760 aa11.2□□□□□ -0.62
PBRM1-206ENST00000409114 SPAG9O60271 1321 aaKnown RBP11.18□□□□□ -0.62
PBRM1-206ENST00000409114 CEP162Q5TB80 1403 aa11.18□□□□□ -0.62
PBRM1-206ENST00000409114 MRC2Q9UBG0 1479 aa11.17□□□□□ -0.62
PBRM1-206ENST00000409114 RAPGEF2Q9Y4G8 1499 aa11.17□□□□□ -0.62
PBRM1-206ENST00000409114 CC2D2AQ9P2K1 1620 aa11.16□□□□□ -0.62
PBRM1-206ENST00000409114 CFAP53Q96M91 514 aa11.16□□□□□ -0.62
PBRM1-206ENST00000409114 GAPVD1Q14C86 1478 aa11.15□□□□□ -0.62
PBRM1-206ENST00000409114 WDR43Q15061 677 aaKnown RBP eCLIP11.15□□□□□ -0.63
PBRM1-206ENST00000409114 WASHC2CQ9Y4E1 1318 aa11.15□□□□□ -0.63
PBRM1-206ENST00000409114 KIF3BO15066 747 aa11.13□□□□□ -0.63
PBRM1-206ENST00000409114 NPHP1O15259 732 aa11.13□□□□□ -0.63
PBRM1-206ENST00000409114 IFT140Q96RY7 1462 aa11.12□□□□□ -0.63
PBRM1-206ENST00000409114 CCDC18Q5T9S5 1454 aa11.11□□□□□ -0.63
PBRM1-206ENST00000409114 WIZO95785 1651 aa11.11□□□□□ -0.63
PBRM1-206ENST00000409114 ANKRD30AQ9BXX3 1397 aa11.11□□□□□ -0.63
PBRM1-206ENST00000409114 GRIN2BQ13224 1484 aa11.1□□□□□ -0.63
PBRM1-206ENST00000409114 EIF4G2P78344 907 aaKnown RBP eCLIP11.09□□□□□ -0.63
PBRM1-206ENST00000409114 ZNF316A6NFI3 1004 aaPredicted RBP11.08□□□□□ -0.64
PBRM1-206ENST00000409114 ARXQ96QS3 562 aa11.08□□□□□ -0.64
PBRM1-206ENST00000409114 CCDC9Q9Y3X0 531 aaKnown RBP11.08□□□□□ -0.64
PBRM1-206ENST00000409114 NUDCQ9Y266 331 aa11.07□□□□□ -0.64
PBRM1-206ENST00000409114 BCL11AQ9H165 835 aa11.06□□□□□ -0.64
PBRM1-206ENST00000409114 KNSTRNQ9Y448 316 aa11.06□□□□□ -0.64
PBRM1-206ENST00000409114 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
PBRM1-206ENST00000409114 CARD11Q9BXL7 1154 aa11.05□□□□□ -0.64
PBRM1-206ENST00000409114 FGD5Q6ZNL6 1462 aa11.05□□□□□ -0.64
PBRM1-206ENST00000409114 HMGXB3Q12766 1538 aa11.05□□□□□ -0.64
PBRM1-206ENST00000409114 DNAJC5BQ9UF47 199 aa11.05□□□□□ -0.64
PBRM1-206ENST00000409114 SRPK2P78362 688 aaKnown RBP11.04□□□□□ -0.64
PBRM1-206ENST00000409114 PPM1GO15355 546 aaPredicted RBP11.04□□□□□ -0.64
PBRM1-206ENST00000409114 PNNQ9H307 717 aaKnown RBP11.04□□□□□ -0.64
PBRM1-206ENST00000409114 FOXD1Q16676 465 aa11.03□□□□□ -0.64
PBRM1-206ENST00000409114 AQRO60306 1485 aaKnown RBP eCLIP11.03□□□□□ -0.641e-6■■■□□ 17.7
PBRM1-206ENST00000409114 CSB-PGBD3P0DP91 1061 aa11.02□□□□□ -0.64
PBRM1-206ENST00000409114 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.02□□□□□ -0.65
PBRM1-206ENST00000409114 HDGFL2Q7Z4V5 671 aaPredicted RBP11.02□□□□□ -0.65
PBRM1-206ENST00000409114 MEX3CQ5U5Q3 659 aaKnown RBP11.01□□□□□ -0.65
PBRM1-206ENST00000409114 HNRNPMP52272 730 aaKnown RBP eCLIP11.01□□□□□ -0.65
PBRM1-206ENST00000409114 PAK3O75914 559 aaPredicted RBP11□□□□□ -0.65
PBRM1-206ENST00000409114 POGZQ7Z3K3 1410 aa11□□□□□ -0.65
PBRM1-206ENST00000409114 EIF5BO60841 1220 aaKnown RBP10.99□□□□□ -0.65
PBRM1-206ENST00000409114 DCAF8L1A6NGE4 600 aa10.99□□□□□ -0.65
PBRM1-206ENST00000409114 CFTRP13569 1480 aa10.99□□□□□ -0.65
PBRM1-206ENST00000409114 GLIPR1L2Q4G1C9 344 aa10.99□□□□□ -0.65
PBRM1-206ENST00000409114 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.99□□□□□ -0.65
PBRM1-206ENST00000409114 MAPK8IP3Q9UPT6 1336 aa10.99□□□□□ -0.65
PBRM1-206ENST00000409114 MYH16Q9H6N6 1097 aa10.98□□□□□ -0.65
PBRM1-206ENST00000409114 STK26Q9P289 416 aa10.98□□□□□ -0.65
PBRM1-206ENST00000409114 TMF1P82094 1093 aa10.98□□□□□ -0.65
PBRM1-206ENST00000409114 NUP155O75694 1391 aa10.98□□□□□ -0.65
PBRM1-206ENST00000409114 DCAF11Q8TEB1 546 aa10.98□□□□□ -0.65
PBRM1-206ENST00000409114 RAD54L2Q9Y4B4 1467 aa10.98□□□□□ -0.65
PBRM1-206ENST00000409114 TMX4Q9H1E5 349 aaPredicted RBP10.97□□□□□ -0.65
PBRM1-206ENST00000409114 PRG4Q92954 1404 aaPredicted RBP10.97□□□□□ -0.65
PBRM1-206ENST00000409114 FHOD3Q2V2M9 1422 aa10.96□□□□□ -0.65
PBRM1-206ENST00000409114 LAMC3Q9Y6N6 1575 aa10.96□□□□□ -0.66
PBRM1-206ENST00000409114 PKD2Q13563 968 aa10.96□□□□□ -0.66
PBRM1-206ENST00000409114 NGDNQ8NEJ9 315 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms