RNA–Protein interactions for RNA: ENST00000406396.7

KDSR-202, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDSR, Length 5,447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-202ENST00000406396 NBR1Q14596 966 aa23.26■■□□□ 1.31
KDSR-202ENST00000406396 MRS2Q9HD23 443 aa23.25■■□□□ 1.31
KDSR-202ENST00000406396 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.2■■□□□ 1.3
KDSR-202ENST00000406396 IRX6P78412 446 aaPredicted RBP23.18■■□□□ 1.3
KDSR-202ENST00000406396 PLEKHD1A6NEE1 506 aa23.16■■□□□ 1.3
KDSR-202ENST00000406396 SMARCA2P51531 1590 aa23.15■■□□□ 1.3
KDSR-202ENST00000406396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.15■■□□□ 1.3
KDSR-202ENST00000406396 HIRIP3Q9BW71 556 aaPredicted RBP23.15■■□□□ 1.3
KDSR-202ENST00000406396 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
KDSR-202ENST00000406396 WDR43Q15061 677 aaKnown RBP eCLIP23.14■■□□□ 1.3
KDSR-202ENST00000406396 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
KDSR-202ENST00000406396 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
KDSR-202ENST00000406396 KDM2AQ9Y2K7 1162 aa23.1■■□□□ 1.29
KDSR-202ENST00000406396 CEP162Q5TB80 1403 aa23.08■■□□□ 1.29
KDSR-202ENST00000406396 KCNH8Q96L42 1107 aa23.08■■□□□ 1.29
KDSR-202ENST00000406396 ARXQ96QS3 562 aa23.07■■□□□ 1.28
KDSR-202ENST00000406396 EIF4G2P78344 907 aaKnown RBP eCLIP23.03■■□□□ 1.28
KDSR-202ENST00000406396 MROH2BQ7Z745 1585 aa23.03■■□□□ 1.28
KDSR-202ENST00000406396 GLIPR1L2Q4G1C9 344 aa23.02■■□□□ 1.28
KDSR-202ENST00000406396 TNIKQ9UKE5 1360 aa23.02■■□□□ 1.27
KDSR-202ENST00000406396 PDS5BQ9NTI5 1447 aa23■■□□□ 1.27
KDSR-202ENST00000406396 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
KDSR-202ENST00000406396 CUX2O14529 1486 aa22.95■■□□□ 1.26
KDSR-202ENST00000406396 RRP7BPQ9NSQ0 103 aa22.93■■□□□ 1.26
KDSR-202ENST00000406396 CFDP1Q9UEE9 299 aaPredicted RBP22.91■■□□□ 1.26
KDSR-202ENST00000406396 CARMIL1Q5VZK9 1371 aa22.9■■□□□ 1.26
KDSR-202ENST00000406396 MYH16Q9H6N6 1097 aa22.86■■□□□ 1.25
KDSR-202ENST00000406396 DDRGK1Q96HY6 314 aa22.86■■□□□ 1.25
KDSR-202ENST00000406396 EIF4G1Q04637 1599 aaKnown RBP22.85■■□□□ 1.25
KDSR-202ENST00000406396 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
KDSR-202ENST00000406396 FHAD1B1AJZ9 1412 aa22.82■■□□□ 1.24
KDSR-202ENST00000406396 BECN1Q14457 450 aa22.82■■□□□ 1.24
KDSR-202ENST00000406396 SUPT16HQ9Y5B9 1047 aaKnown RBP22.79■■□□□ 1.24
KDSR-202ENST00000406396 SENP3-EIF4A1A0A087X0R7 540 aa22.77■■□□□ 1.24
KDSR-202ENST00000406396 ANP32EQ9BTT0 268 aa22.77■■□□□ 1.24
KDSR-202ENST00000406396 SOGA1O94964 1423 aa22.76■■□□□ 1.23
KDSR-202ENST00000406396 PPP1R15AO75807 674 aaPredicted RBP22.75■■□□□ 1.23
KDSR-202ENST00000406396 ARID4BQ4LE39 1312 aaPredicted RBP22.74■■□□□ 1.23
KDSR-202ENST00000406396 CADPSQ9ULU8 1353 aa22.73■■□□□ 1.23
KDSR-202ENST00000406396 RGL3Q3MIN7 710 aa22.71■■□□□ 1.23
KDSR-202ENST00000406396 CCNB3Q8WWL7 1395 aa22.71■■□□□ 1.23
KDSR-202ENST00000406396 WIZO95785 1651 aa22.7■■□□□ 1.22
KDSR-202ENST00000406396 TRIM44Q96DX7 344 aaPredicted RBP22.69■■□□□ 1.22
KDSR-202ENST00000406396 ATAD2BQ9ULI0 1458 aa22.68■■□□□ 1.22
KDSR-202ENST00000406396 CARMIL2Q6F5E8 1435 aa22.68■■□□□ 1.22
KDSR-202ENST00000406396 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
KDSR-202ENST00000406396 GOLGA6L22H0YM25 854 aa22.66■■□□□ 1.22
KDSR-202ENST00000406396 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.22
KDSR-202ENST00000406396 SMARCA4P51532 1647 aa22.64■■□□□ 1.21
KDSR-202ENST00000406396 NCLP19338 710 aaKnown RBP22.64■■□□□ 1.21
KDSR-202ENST00000406396 KNSTRNQ9Y448 316 aa22.64■■□□□ 1.21
KDSR-202ENST00000406396 CARD11Q9BXL7 1154 aa22.62■■□□□ 1.21
KDSR-202ENST00000406396 PPP4R2Q9NY27 417 aa22.62■■□□□ 1.21
KDSR-202ENST00000406396 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
KDSR-202ENST00000406396 CFAP53Q96M91 514 aa22.62■■□□□ 1.21
KDSR-202ENST00000406396 PPM1GO15355 546 aaPredicted RBP22.61■■□□□ 1.21
KDSR-202ENST00000406396 SIN3AQ96ST3 1273 aa22.6■■□□□ 1.21
KDSR-202ENST00000406396 CDCA8Q53HL2 280 aa22.6■■□□□ 1.21
KDSR-202ENST00000406396 FTSJ3Q8IY81 847 aaKnown RBP22.55■■□□□ 1.2
KDSR-202ENST00000406396 LAS1LQ9Y4W2 734 aaKnown RBP22.54■■□□□ 1.2
KDSR-202ENST00000406396 ZBTB7CA1YPR0 619 aa22.53■■□□□ 1.2
KDSR-202ENST00000406396 C14orf37Q86TY3 774 aa22.52■■□□□ 1.2
KDSR-202ENST00000406396 NEUROD2Q15784 382 aa22.51■■□□□ 1.19
KDSR-202ENST00000406396 RGS3P49796 1198 aa22.51■■□□□ 1.19
KDSR-202ENST00000406396 NOP58Q9Y2X3 529 aaKnown RBP22.51■■□□□ 1.19
KDSR-202ENST00000406396 TRHP20396 242 aaPredicted RBP22.5■■□□□ 1.19
KDSR-202ENST00000406396 KANK1Q14678 1352 aa22.49■■□□□ 1.19
KDSR-202ENST00000406396 PLEKHG5O94827 1062 aa22.48■■□□□ 1.19
KDSR-202ENST00000406396 PTMAP06454 111 aaKnown RBP22.48■■□□□ 1.19
KDSR-202ENST00000406396 FMN1Q68DA7 1419 aa22.48■■□□□ 1.19
KDSR-202ENST00000406396 ERICH6BQ5W0A0 696 aa22.47■■□□□ 1.19
KDSR-202ENST00000406396 B4GALNT3Q6L9W6 998 aa22.47■■□□□ 1.19
KDSR-202ENST00000406396 CASC1Q6TDU7 716 aa22.46■■□□□ 1.19
KDSR-202ENST00000406396 VPS8Q8N3P4 1428 aa22.46■■□□□ 1.19
KDSR-202ENST00000406396 A0A0G2JS52 829 aa22.45■■□□□ 1.18
KDSR-202ENST00000406396 ARHGAP35Q9NRY4 1499 aa22.44■■□□□ 1.18
KDSR-202ENST00000406396 FRAT1Q92837 279 aaPredicted RBP22.43■■□□□ 1.18
KDSR-202ENST00000406396 MAPK8IP3Q9UPT6 1336 aa22.43■■□□□ 1.18
KDSR-202ENST00000406396 FANCD2Q9BXW9 1451 aa22.43■■□□□ 1.18
KDSR-202ENST00000406396 CDK11BP21127 795 aaKnown RBP22.43■■□□□ 1.18
KDSR-202ENST00000406396 RAPGEF2Q9Y4G8 1499 aa22.42■■□□□ 1.18
KDSR-202ENST00000406396 RTN4Q9NQC3 1192 aaKnown RBP22.4■■□□□ 1.18
KDSR-202ENST00000406396 CC2D1BQ5T0F9 858 aaKnown RBP22.4■■□□□ 1.18
KDSR-202ENST00000406396 NUDCQ9Y266 331 aa22.39■■□□□ 1.17
KDSR-202ENST00000406396 TPRNQ4KMQ1 711 aa22.38■■□□□ 1.17
KDSR-202ENST00000406396 DNTTIP2Q5QJE6 756 aaKnown RBP22.38■■□□□ 1.17
KDSR-202ENST00000406396 ZRSR1Q15695 479 aaKnown RBP22.37■■□□□ 1.17
KDSR-202ENST00000406396 TNNT2P45379 298 aaPredicted RBP22.35■■□□□ 1.17
KDSR-202ENST00000406396 NAP1L5Q96NT1 182 aaPredicted RBP22.34■■□□□ 1.17
KDSR-202ENST00000406396 HDGFP51858 240 aaKnown RBP22.33■■□□□ 1.17
KDSR-202ENST00000406396 EFCAB2Q5VUJ9 269 aa22.32■■□□□ 1.16
KDSR-202ENST00000406396 POGKQ9P215 609 aa22.32■■□□□ 1.16
KDSR-202ENST00000406396 CCER2I3L3R5 266 aa22.32■■□□□ 1.16
KDSR-202ENST00000406396 TIMELESSQ9UNS1 1208 aa22.31■■□□□ 1.16
KDSR-202ENST00000406396 HSP90AB1P08238 724 aaKnown RBP22.29■■□□□ 1.16
KDSR-202ENST00000406396 MS4A1P11836 297 aa22.29■■□□□ 1.16
KDSR-202ENST00000406396 CHMP4BQ9H444 224 aaKnown RBP22.28■■□□□ 1.16
KDSR-202ENST00000406396 HAP1P54257 671 aaPredicted RBP22.28■■□□□ 1.16
KDSR-202ENST00000406396 MLECQ14165 292 aa22.28■■□□□ 1.16
KDSR-202ENST00000406396 U2SURPO15042 1029 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms