RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 TIMELESSQ9UNS1 1208 aa19.3■□□□□ 0.68
DUSP28-202ENST00000405954 LAS1LQ9Y4W2 734 aaKnown RBP19.3■□□□□ 0.68
DUSP28-202ENST00000405954 PAK3O75914 559 aaPredicted RBP19.28■□□□□ 0.68
DUSP28-202ENST00000405954 NEFMP07197 916 aa19.27■□□□□ 0.67
DUSP28-202ENST00000405954 WRNQ14191 1432 aaPredicted RBP eCLIP19.26■□□□□ 0.67
DUSP28-202ENST00000405954 DAXXQ9UER7 740 aaPredicted RBP19.23■□□□□ 0.67
DUSP28-202ENST00000405954 GOLGA3Q08378 1498 aa19.23■□□□□ 0.67
DUSP28-202ENST00000405954 CLIP1P30622 1438 aa19.22■□□□□ 0.67
DUSP28-202ENST00000405954 PPP4R2Q9NY27 417 aa19.2■□□□□ 0.66
DUSP28-202ENST00000405954 CNGB1Q14028 1251 aaPredicted RBP19.19■□□□□ 0.66
DUSP28-202ENST00000405954 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
DUSP28-202ENST00000405954 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
DUSP28-202ENST00000405954 BICRAQ9NZM4 1560 aa19.16■□□□□ 0.66
DUSP28-202ENST00000405954 VSIG10Q8N0Z9 540 aa19.15■□□□□ 0.66
DUSP28-202ENST00000405954 KANK4Q5T7N3 995 aaPredicted RBP19.14■□□□□ 0.65
DUSP28-202ENST00000405954 IPO9Q96P70 1041 aaKnown RBP19.1■□□□□ 0.65
DUSP28-202ENST00000405954 PODXL2Q9NZ53 605 aa19.09■□□□□ 0.65
DUSP28-202ENST00000405954 BRPF3Q9ULD4 1205 aa19.09■□□□□ 0.65
DUSP28-202ENST00000405954 ATP1B4Q9UN42 357 aaPredicted RBP19.05■□□□□ 0.64
DUSP28-202ENST00000405954 FAM9BQ8IZU0 186 aa19.04■□□□□ 0.64
DUSP28-202ENST00000405954 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
DUSP28-202ENST00000405954 EEA1Q15075 1411 aa19■□□□□ 0.63
DUSP28-202ENST00000405954 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
DUSP28-202ENST00000405954 PLEKHG5O94827 1062 aa18.99■□□□□ 0.63
DUSP28-202ENST00000405954 P3H3Q8IVL6 736 aa18.97■□□□□ 0.63
DUSP28-202ENST00000405954 ARXQ96QS3 562 aa18.97■□□□□ 0.63
DUSP28-202ENST00000405954 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
DUSP28-202ENST00000405954 CCER2I3L3R5 266 aa18.97■□□□□ 0.63
DUSP28-202ENST00000405954 PPM1GO15355 546 aaPredicted RBP18.94■□□□□ 0.62
DUSP28-202ENST00000405954 RSPH6AQ9H0K4 717 aa18.94■□□□□ 0.62
DUSP28-202ENST00000405954 BAZ1BQ9UIG0 1483 aaKnown RBP18.94■□□□□ 0.62
DUSP28-202ENST00000405954 KIF21BO75037 1637 aa18.92■□□□□ 0.62
DUSP28-202ENST00000405954 NAP1L5Q96NT1 182 aaPredicted RBP18.91■□□□□ 0.62
DUSP28-202ENST00000405954 SENP3-EIF4A1A0A087X0R7 540 aa18.91■□□□□ 0.62
DUSP28-202ENST00000405954 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
DUSP28-202ENST00000405954 DHX57Q6P158 1386 aaKnown RBP18.91■□□□□ 0.62
DUSP28-202ENST00000405954 ATAD2BQ9ULI0 1458 aa18.87■□□□□ 0.61
DUSP28-202ENST00000405954 A0A0U1RQG5 324 aaPredicted RBP18.87■□□□□ 0.61
DUSP28-202ENST00000405954 ZMYND15Q9H091 742 aa18.87■□□□□ 0.61
DUSP28-202ENST00000405954 GSE1Q14687 1217 aa18.86■□□□□ 0.61
DUSP28-202ENST00000405954 USP35Q9P2H5 1018 aa18.83■□□□□ 0.61
DUSP28-202ENST00000405954 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.61
DUSP28-202ENST00000405954 FAM50AQ14320 339 aaKnown RBP18.83■□□□□ 0.6
DUSP28-202ENST00000405954 POLR3GLQ9BT43 218 aa18.83■□□□□ 0.6
DUSP28-202ENST00000405954 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
DUSP28-202ENST00000405954 SLC24A1O60721 1099 aa18.8■□□□□ 0.6
DUSP28-202ENST00000405954 ARAP1Q96P48 1450 aa18.79■□□□□ 0.6
DUSP28-202ENST00000405954 HSP90AA2PQ14568 343 aaPredicted RBP18.79■□□□□ 0.6
DUSP28-202ENST00000405954 HSP90AA1P07900 732 aaKnown RBP18.73■□□□□ 0.59
DUSP28-202ENST00000405954 FRAT1Q92837 279 aaPredicted RBP18.72■□□□□ 0.59
DUSP28-202ENST00000405954 PPP1R15AO75807 674 aaPredicted RBP18.71■□□□□ 0.59
DUSP28-202ENST00000405954 SLC4A3P48751 1232 aa18.7■□□□□ 0.58
DUSP28-202ENST00000405954 DDRGK1Q96HY6 314 aa18.66■□□□□ 0.58
DUSP28-202ENST00000405954 PNNQ9H307 717 aaKnown RBP18.65■□□□□ 0.58
DUSP28-202ENST00000405954 CCNB3Q8WWL7 1395 aa18.64■□□□□ 0.58
DUSP28-202ENST00000405954 RAB3GAP2Q9H2M9 1393 aa18.64■□□□□ 0.57
DUSP28-202ENST00000405954 TONSLQ96HA7 1378 aa18.64■□□□□ 0.57
DUSP28-202ENST00000405954 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
DUSP28-202ENST00000405954 C11orf95C9JLR9 678 aaPredicted RBP18.62■□□□□ 0.57
DUSP28-202ENST00000405954 NFKBIBQ15653 356 aa18.62■□□□□ 0.57
DUSP28-202ENST00000405954 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
DUSP28-202ENST00000405954 CUX1P39880 1505 aa18.61■□□□□ 0.57
DUSP28-202ENST00000405954 FAM43AQ8N2R8 423 aa18.59■□□□□ 0.57
DUSP28-202ENST00000405954 PRXQ9BXM0 1461 aa18.59■□□□□ 0.57
DUSP28-202ENST00000405954 ARID3CA6NKF2 412 aa18.58■□□□□ 0.57
DUSP28-202ENST00000405954 PDE4AP27815 886 aa18.58■□□□□ 0.56
DUSP28-202ENST00000405954 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
DUSP28-202ENST00000405954 ARHGAP35Q9NRY4 1499 aa18.58■□□□□ 0.56
DUSP28-202ENST00000405954 PEG3Q9GZU2 1588 aa18.58■□□□□ 0.56
DUSP28-202ENST00000405954 KIF27Q86VH2 1401 aa18.56■□□□□ 0.56
DUSP28-202ENST00000405954 CUX2O14529 1486 aa18.54■□□□□ 0.56
DUSP28-202ENST00000405954 WASHC2CQ9Y4E1 1318 aa18.54■□□□□ 0.56
DUSP28-202ENST00000405954 PHLDB1Q86UU1 1377 aa18.51■□□□□ 0.55
DUSP28-202ENST00000405954 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
DUSP28-202ENST00000405954 WDR97A6NE52 1622 aa18.47■□□□□ 0.55
DUSP28-202ENST00000405954 RRBP1Q9P2E9 1410 aaKnown RBP18.47■□□□□ 0.55
DUSP28-202ENST00000405954 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
DUSP28-202ENST00000405954 ARID3AQ99856 593 aa18.46■□□□□ 0.54
DUSP28-202ENST00000405954 CCDC184Q52MB2 194 aa18.45■□□□□ 0.54
DUSP28-202ENST00000405954 MAPKBP1O60336 1514 aa18.43■□□□□ 0.54
DUSP28-202ENST00000405954 FHOD3Q2V2M9 1422 aa18.43■□□□□ 0.54
DUSP28-202ENST00000405954 BIVM-ERCC5R4GMW8 1640 aa18.43■□□□□ 0.54
DUSP28-202ENST00000405954 RRP9O43818 475 aaKnown RBP18.42■□□□□ 0.54
DUSP28-202ENST00000405954 CHIC2Q9UKJ5 165 aa18.42■□□□□ 0.54
DUSP28-202ENST00000405954 IGF1RP08069 1367 aa18.42■□□□□ 0.54
DUSP28-202ENST00000405954 ERICH3Q5RHP9 1530 aa18.41■□□□□ 0.54
DUSP28-202ENST00000405954 ZBED9Q6R2W3 1325 aa18.41■□□□□ 0.54
DUSP28-202ENST00000405954 L1TD1Q5T7N2 865 aaKnown RBP18.41■□□□□ 0.54
DUSP28-202ENST00000405954 NESP48681 1621 aa18.4■□□□□ 0.54
DUSP28-202ENST00000405954 CARMIL1Q5VZK9 1371 aa18.4■□□□□ 0.54
DUSP28-202ENST00000405954 GZF1Q9H116 711 aaPredicted RBP18.4■□□□□ 0.54
DUSP28-202ENST00000405954 NCAPD3P42695 1498 aa18.4■□□□□ 0.54
DUSP28-202ENST00000405954 AKNAQ7Z591 1439 aa18.39■□□□□ 0.54
DUSP28-202ENST00000405954 TRIM44Q96DX7 344 aaPredicted RBP18.39■□□□□ 0.53
DUSP28-202ENST00000405954 NUDCQ9Y266 331 aa18.39■□□□□ 0.53
DUSP28-202ENST00000405954 SETD5Q9C0A6 1442 aa18.38■□□□□ 0.53
DUSP28-202ENST00000405954 EIF4G2P78344 907 aaKnown RBP eCLIP18.36■□□□□ 0.53
DUSP28-202ENST00000405954 RBM10P98175 930 aaKnown RBP18.36■□□□□ 0.53
DUSP28-202ENST00000405954 EXOC6Q8TAG9 804 aa18.36■□□□□ 0.53
DUSP28-202ENST00000405954 TMC1Q8TDI8 760 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms