RNA–Protein interactions for RNA: ENST00000404816.6

LTBP1-203, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene LTBP1, Length 6,333 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-203ENST00000404816 NCLP19338 710 aaKnown RBP24.16■■□□□ 1.46
LTBP1-203ENST00000404816 DDRGK1Q96HY6 314 aa24.15■■□□□ 1.46
LTBP1-203ENST00000404816 TULP1O00294 542 aaPredicted RBP24.13■■□□□ 1.45
LTBP1-203ENST00000404816 DEKP35659 375 aaKnown RBP24.11■■□□□ 1.45
LTBP1-203ENST00000404816 SENP3Q9H4L4 574 aaPredicted RBP24.11■■□□□ 1.45
LTBP1-203ENST00000404816 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.11■■□□□ 1.45
LTBP1-203ENST00000404816 CHIC2Q9UKJ5 165 aa24.1■■□□□ 1.45
LTBP1-203ENST00000404816 ARID4BQ4LE39 1312 aaPredicted RBP24.09■■□□□ 1.45
LTBP1-203ENST00000404816 WDR43Q15061 677 aaKnown RBP eCLIP24.08■■□□□ 1.45
LTBP1-203ENST00000404816 NOP58Q9Y2X3 529 aaKnown RBP24.08■■□□□ 1.45
LTBP1-203ENST00000404816 TNNT2P45379 298 aaPredicted RBP24.07■■□□□ 1.44
LTBP1-203ENST00000404816 DNTTIP2Q5QJE6 756 aaKnown RBP24.06■■□□□ 1.44
LTBP1-203ENST00000404816 PLEKHG5O94827 1062 aa24.06■■□□□ 1.44
LTBP1-203ENST00000404816 BECN1Q14457 450 aa24.05■■□□□ 1.44
LTBP1-203ENST00000404816 KDM2AQ9Y2K7 1162 aa24.03■■□□□ 1.44
LTBP1-203ENST00000404816 PTMAP06454 111 aaKnown RBP24.03■■□□□ 1.44
LTBP1-203ENST00000404816 ERICH6BQ5W0A0 696 aa24■■□□□ 1.43
LTBP1-203ENST00000404816 MYO15BQ96JP2 1530 aa23.99■■□□□ 1.43
LTBP1-203ENST00000404816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.99■■□□□ 1.43
LTBP1-203ENST00000404816 ZBTB7CA1YPR0 619 aa23.96■■□□□ 1.43
LTBP1-203ENST00000404816 B4GALNT3Q6L9W6 998 aa23.93■■□□□ 1.42
LTBP1-203ENST00000404816 PPM1GO15355 546 aaPredicted RBP23.93■■□□□ 1.42
LTBP1-203ENST00000404816 ARID3AQ99856 593 aa23.88■■□□□ 1.41
LTBP1-203ENST00000404816 NCBP3Q53F19 620 aaKnown RBP23.87■■□□□ 1.41
LTBP1-203ENST00000404816 CCDC180Q9P1Z9 1646 aa23.87■■□□□ 1.41
LTBP1-203ENST00000404816 GOLGA6L22H0YM25 854 aa23.87■■□□□ 1.41
LTBP1-203ENST00000404816 RGS3P49796 1198 aa23.87■■□□□ 1.41
LTBP1-203ENST00000404816 RBM19Q9Y4C8 960 aaKnown RBP23.86■■□□□ 1.41
LTBP1-203ENST00000404816 PLCB2Q00722 1185 aa23.85■■□□□ 1.41
LTBP1-203ENST00000404816 MYH16Q9H6N6 1097 aa23.83■■□□□ 1.41
LTBP1-203ENST00000404816 NPM1P06748 294 aaKnown RBP eCLIP23.81■■□□□ 1.4
LTBP1-203ENST00000404816 PPP4R2Q9NY27 417 aa23.8■■□□□ 1.4
LTBP1-203ENST00000404816 SPRYD3Q8NCJ5 442 aa23.8■■□□□ 1.4
LTBP1-203ENST00000404816 EIF4G2P78344 907 aaKnown RBP eCLIP23.76■■□□□ 1.39
LTBP1-203ENST00000404816 C14orf37Q86TY3 774 aa23.72■■□□□ 1.39
LTBP1-203ENST00000404816 TAOK2Q9UL54 1235 aa23.71■■□□□ 1.39
LTBP1-203ENST00000404816 RRP7BPQ9NSQ0 103 aa23.68■■□□□ 1.38
LTBP1-203ENST00000404816 NEUROD2Q15784 382 aa23.64■■□□□ 1.37
LTBP1-203ENST00000404816 HSP90AB1P08238 724 aaKnown RBP23.62■■□□□ 1.37
LTBP1-203ENST00000404816 CLIP1P30622 1438 aa23.62■■□□□ 1.37
LTBP1-203ENST00000404816 HAP1P54257 671 aaPredicted RBP23.6■■□□□ 1.37
LTBP1-203ENST00000404816 TSHZ2Q9NRE2 1034 aa23.6■■□□□ 1.37
LTBP1-203ENST00000404816 FRAT1Q92837 279 aaPredicted RBP23.59■■□□□ 1.37
LTBP1-203ENST00000404816 FTSJ3Q8IY81 847 aaKnown RBP23.57■■□□□ 1.36
LTBP1-203ENST00000404816 RSF1Q96T23 1441 aaPredicted RBP23.57■■□□□ 1.36
LTBP1-203ENST00000404816 ZRSR1Q15695 479 aaKnown RBP23.57■■□□□ 1.36
LTBP1-203ENST00000404816 GZF1Q9H116 711 aaPredicted RBP23.56■■□□□ 1.36
LTBP1-203ENST00000404816 MSNP26038 577 aaKnown RBP23.56■■□□□ 1.36
LTBP1-203ENST00000404816 SIN3AQ96ST3 1273 aa23.56■■□□□ 1.36
LTBP1-203ENST00000404816 CEP162Q5TB80 1403 aa23.52■■□□□ 1.36
LTBP1-203ENST00000404816 RGL3Q3MIN7 710 aa23.5■■□□□ 1.35
LTBP1-203ENST00000404816 CASC1Q6TDU7 716 aa23.49■■□□□ 1.35
LTBP1-203ENST00000404816 MTUS2Q5JR59 1369 aa23.49■■□□□ 1.35
LTBP1-203ENST00000404816 L1TD1Q5T7N2 865 aaKnown RBP23.48■■□□□ 1.35
LTBP1-203ENST00000404816 GOLGA3Q08378 1498 aa23.47■■□□□ 1.35
LTBP1-203ENST00000404816 CLSTN1O94985 981 aa23.47■■□□□ 1.35
LTBP1-203ENST00000404816 CC2D1BQ5T0F9 858 aaKnown RBP23.45■■□□□ 1.35
LTBP1-203ENST00000404816 NPHP1O15259 732 aa23.43■■□□□ 1.34
LTBP1-203ENST00000404816 HSCBQ8IWL3 235 aa23.41■■□□□ 1.34
LTBP1-203ENST00000404816 SLKQ9H2G2 1235 aaPredicted RBP23.4■■□□□ 1.34
LTBP1-203ENST00000404816 PPP1R15AO75807 674 aaPredicted RBP23.4■■□□□ 1.34
LTBP1-203ENST00000404816 RB1CC1Q8TDY2 1594 aa23.39■■□□□ 1.34
LTBP1-203ENST00000404816 CHAF1AQ13111 956 aaPredicted RBP23.39■■□□□ 1.33
LTBP1-203ENST00000404816 TSPY4P0CV99 314 aa23.36■■□□□ 1.33
LTBP1-203ENST00000404816 TSPY10P0CW01 314 aa23.36■■□□□ 1.33
LTBP1-203ENST00000404816 DRC7Q8IY82 874 aa23.36■■□□□ 1.33
LTBP1-203ENST00000404816 KNSTRNQ9Y448 316 aa23.36■■□□□ 1.33
LTBP1-203ENST00000404816 PNNQ9H307 717 aaKnown RBP23.35■■□□□ 1.33
LTBP1-203ENST00000404816 EEA1Q15075 1411 aa23.35■■□□□ 1.33
LTBP1-203ENST00000404816 CARD11Q9BXL7 1154 aa23.33■■□□□ 1.33
LTBP1-203ENST00000404816 KCNH8Q96L42 1107 aa23.33■■□□□ 1.33
LTBP1-203ENST00000404816 NAP1L2Q9ULW6 460 aaPredicted RBP23.32■■□□□ 1.32
LTBP1-203ENST00000404816 WRNQ14191 1432 aaPredicted RBP eCLIP23.31■■□□□ 1.32
LTBP1-203ENST00000404816 GOLGA6L6A8MZA4 724 aa23.29■■□□□ 1.32
LTBP1-203ENST00000404816 PRM3Q9NNZ6 103 aa23.27■■□□□ 1.32
LTBP1-203ENST00000404816 TNIKQ9UKE5 1360 aa23.26■■□□□ 1.31
LTBP1-203ENST00000404816 VSIG10Q8N0Z9 540 aa23.26■■□□□ 1.31
LTBP1-203ENST00000404816 CFAP53Q96M91 514 aa23.25■■□□□ 1.31
LTBP1-203ENST00000404816 CHMP7Q8WUX9 453 aaPredicted RBP23.24■■□□□ 1.31
LTBP1-203ENST00000404816 TIMELESSQ9UNS1 1208 aa23.21■■□□□ 1.31
LTBP1-203ENST00000404816 IPO9Q96P70 1041 aaKnown RBP23.21■■□□□ 1.31
LTBP1-203ENST00000404816 GOLGA6L4A6NEF3 574 aa23.2■■□□□ 1.31
LTBP1-203ENST00000404816 FGD1P98174 961 aa23.19■■□□□ 1.3
LTBP1-203ENST00000404816 LMOD2Q6P5Q4 547 aa23.19■■□□□ 1.3
LTBP1-203ENST00000404816 MAPK8IP3Q9UPT6 1336 aa23.19■■□□□ 1.3
LTBP1-203ENST00000404816 CEP164Q9UPV0 1460 aa23.19■■□□□ 1.3
LTBP1-203ENST00000404816 BAZ1BQ9UIG0 1483 aaKnown RBP23.19■■□□□ 1.3
LTBP1-203ENST00000404816 KCNJ4P48050 445 aa23.18■■□□□ 1.3
LTBP1-203ENST00000404816 FOXD4L1Q9NU39 408 aa23.18■■□□□ 1.3
LTBP1-203ENST00000404816 GOLGA6L3A6NEY3 463 aa23.18■■□□□ 1.3
LTBP1-203ENST00000404816 NACADO15069 1562 aa23.17■■□□□ 1.3
LTBP1-203ENST00000404816 HSP90AA2PQ14568 343 aaPredicted RBP23.17■■□□□ 1.3
LTBP1-203ENST00000404816 APBB1O00213 710 aa23.17■■□□□ 1.3
LTBP1-203ENST00000404816 TNNT3P45378 269 aaPredicted RBP23.17■■□□□ 1.3
LTBP1-203ENST00000404816 OS9Q13438 667 aaPredicted RBP23.15■■□□□ 1.3
LTBP1-203ENST00000404816 U2SURPO15042 1029 aaKnown RBP23.15■■□□□ 1.3
LTBP1-203ENST00000404816 SLC4A3P48751 1232 aa23.14■■□□□ 1.29
LTBP1-203ENST00000404816 ISY1Q9ULR0 285 aaKnown RBP23.13■■□□□ 1.29
LTBP1-203ENST00000404816 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
LTBP1-203ENST00000404816 NRDCO43847 1150 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms