RNA–Protein interactions for RNA: ENST00000404753.7

CAPN10-208, Transcript of calpain 10, human

APPRIS ALT2 TSL 5 BASIC

Gene CAPN10, Length 2,570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN10-208	ENST00000404753	CADPS	Q9ULU8	1353 aa		33.18	■■■□□ 2.9
CAPN10-208	ENST00000404753	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.16	■■■□□ 2.9
CAPN10-208	ENST00000404753	NES	P48681	1621 aa		33.15	■■■□□ 2.9
CAPN10-208	ENST00000404753	CCER2	I3L3R5	266 aa		33.13	■■■□□ 2.89
CAPN10-208	ENST00000404753	CUX2	O14529	1486 aa		33.09	■■■□□ 2.89
CAPN10-208	ENST00000404753	WDR97	A6NE52	1622 aa		33.08	■■■□□ 2.89
CAPN10-208	ENST00000404753	MAPKBP1	O60336	1514 aa		33.07	■■■□□ 2.88
CAPN10-208	ENST00000404753	RRBP1	Q9P2E9	1410 aa	Known RBP	33.06	■■■□□ 2.88
CAPN10-208	ENST00000404753	ANP32C	O43423	234 aa		33.06	■■■□□ 2.88
CAPN10-208	ENST00000404753	SYNJ1	O43426	1573 aa		33.03	■■■□□ 2.88
CAPN10-208	ENST00000404753	NBR1	Q14596	966 aa		33.03	■■■□□ 2.88
CAPN10-208	ENST00000404753	SALL2	Q9Y467	1007 aa	Predicted RBP	33.01	■■■□□ 2.87
CAPN10-208	ENST00000404753	SIN3A	Q96ST3	1273 aa		33	■■■□□ 2.87
CAPN10-208	ENST00000404753	RAB3GAP2	Q9H2M9	1393 aa		32.98	■■■□□ 2.87
CAPN10-208	ENST00000404753	CCNB3	Q8WWL7	1395 aa		32.93	■■■□□ 2.86
CAPN10-208	ENST00000404753	PRDM2	Q13029	1718 aa		32.91	■■■□□ 2.86
CAPN10-208	ENST00000404753	PAK3	O75914	559 aa	Predicted RBP	32.89	■■■□□ 2.86
CAPN10-208	ENST00000404753	ARAP1	Q96P48	1450 aa		32.89	■■■□□ 2.86
CAPN10-208	ENST00000404753	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.88	■■■□□ 2.85
CAPN10-208	ENST00000404753	NOP58	Q9Y2X3	529 aa	Known RBP	32.86	■■■□□ 2.85
CAPN10-208	ENST00000404753	FANCD2	Q9BXW9	1451 aa		32.85	■■■□□ 2.85
CAPN10-208	ENST00000404753	CUX1	P39880	1505 aa		32.82	■■■□□ 2.84
CAPN10-208	ENST00000404753	CCDC136	Q96JN2	1154 aa		32.81	■■■□□ 2.84
CAPN10-208	ENST00000404753	PPP4R2	Q9NY27	417 aa		32.79	■■■□□ 2.84
CAPN10-208	ENST00000404753	LAMC3	Q9Y6N6	1575 aa		32.79	■■■□□ 2.84
CAPN10-208	ENST00000404753	TOP2B	Q02880	1626 aa		32.77	■■■□□ 2.84
CAPN10-208	ENST00000404753	B4GALNT3	Q6L9W6	998 aa		32.75	■■■□□ 2.83
CAPN10-208	ENST00000404753	ERICH6B	Q5W0A0	696 aa		32.74	■■■□□ 2.83
CAPN10-208	ENST00000404753	IL27	Q8NEV9	243 aa		32.72	■■■□□ 2.83
CAPN10-208	ENST00000404753	BIVM-ERCC5	R4GMW8	1640 aa		32.68	■■■□□ 2.82
CAPN10-208	ENST00000404753	RTN4	Q9NQC3	1192 aa	Known RBP	32.65	■■■□□ 2.82
CAPN10-208	ENST00000404753	SETD5	Q9C0A6	1442 aa		32.64	■■■□□ 2.82
CAPN10-208	ENST00000404753	PDS5B	Q9NTI5	1447 aa		32.61	■■■□□ 2.81
CAPN10-208	ENST00000404753	KIF21A	Q7Z4S6	1674 aa		32.59	■■■□□ 2.81
CAPN10-208	ENST00000404753	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.56	■■■□□ 2.8
CAPN10-208	ENST00000404753	TIMELESS	Q9UNS1	1208 aa		32.53	■■■□□ 2.8
CAPN10-208	ENST00000404753	RTL5	Q5HYW3	569 aa	Predicted RBP	32.51	■■■□□ 2.8
CAPN10-208	ENST00000404753	FGD5	Q6ZNL6	1462 aa		32.49	■■■□□ 2.79
CAPN10-208	ENST00000404753	URB2	Q14146	1524 aa	Known RBP	32.47	■■■□□ 2.79
CAPN10-208	ENST00000404753	TOPBP1	Q92547	1522 aa		32.47	■■■□□ 2.79
CAPN10-208	ENST00000404753	PRX	Q9BXM0	1461 aa		32.46	■■■□□ 2.79
CAPN10-208	ENST00000404753	IPO9	Q96P70	1041 aa	Known RBP	32.43	■■■□□ 2.78
CAPN10-208	ENST00000404753	ERICH3	Q5RHP9	1530 aa		32.43	■■■□□ 2.78
CAPN10-208	ENST00000404753	CCDC184	Q52MB2	194 aa		32.43	■■■□□ 2.78
CAPN10-208	ENST00000404753	DNMBP	Q6XZF7	1577 aa		32.42	■■■□□ 2.78
CAPN10-208	ENST00000404753	FAM50A	Q14320	339 aa	Known RBP	32.38	■■■□□ 2.77
CAPN10-208	ENST00000404753	RAD54L2	Q9Y4B4	1467 aa		32.37	■■■□□ 2.77
CAPN10-208	ENST00000404753	ZBTB47	Q9UFB7	747 aa	Predicted RBP	32.36	■■■□□ 2.77
CAPN10-208	ENST00000404753	ANP32A	P39687	249 aa	Known RBP	32.35	■■■□□ 2.77
CAPN10-208	ENST00000404753	ARHGAP35	Q9NRY4	1499 aa		32.34	■■■□□ 2.77
CAPN10-208	ENST00000404753	POLA1	P09884	1462 aa	Predicted RBP	32.34	■■■□□ 2.77
CAPN10-208	ENST00000404753	UBE2Q2	Q8WVN8	375 aa		32.33	■■■□□ 2.77
CAPN10-208	ENST00000404753	PHLDB1	Q86UU1	1377 aa		32.3	■■■□□ 2.76
CAPN10-208	ENST00000404753	ERCC6	Q03468	1493 aa		32.29	■■■□□ 2.76
CAPN10-208	ENST00000404753	TONSL	Q96HA7	1378 aa		32.29	■■■□□ 2.76
CAPN10-208	ENST00000404753	FAM9B	Q8IZU0	186 aa		32.27	■■■□□ 2.76
CAPN10-208	ENST00000404753	WASHC2A	Q641Q2	1341 aa		32.25	■■■□□ 2.75
CAPN10-208	ENST00000404753	KIF27	Q86VH2	1401 aa		32.24	■■■□□ 2.75
CAPN10-208	ENST00000404753	MRC2	Q9UBG0	1479 aa		32.2	■■■□□ 2.75
CAPN10-208	ENST00000404753	TIAM1	Q13009	1591 aa		32.17	■■■□□ 2.74
CAPN10-208	ENST00000404753	ZBED9	Q6R2W3	1325 aa		32.16	■■■□□ 2.74
CAPN10-208	ENST00000404753	LAS1L	Q9Y4W2	734 aa	Known RBP	32.11	■■■□□ 2.73
CAPN10-208	ENST00000404753	LRRC9	Q6ZRR7	1453 aa		32.11	■■■□□ 2.73
CAPN10-208	ENST00000404753	TDRD9	Q8NDG6	1382 aa	Known RBP	32.09	■■■□□ 2.73
CAPN10-208	ENST00000404753	NEFM	P07197	916 aa		32.09	■■■□□ 2.73
CAPN10-208	ENST00000404753	AKNA	Q7Z591	1439 aa		32.09	■■■□□ 2.73
CAPN10-208	ENST00000404753	MRS2	Q9HD23	443 aa		32.08	■■■□□ 2.73
CAPN10-208	ENST00000404753	ABCA10	Q8WWZ4	1543 aa		32.07	■■■□□ 2.72
CAPN10-208	ENST00000404753	FHAD1	B1AJZ9	1412 aa		32.07	■■■□□ 2.72
CAPN10-208	ENST00000404753	HSPA5	P11021	654 aa	Known RBP	32.07	■■■□□ 2.72
CAPN10-208	ENST00000404753	IGF1R	P08069	1367 aa		32.05	■■■□□ 2.72
CAPN10-208	ENST00000404753	NPM2	Q86SE8	214 aa	Known RBP	32.04	■■■□□ 2.72
CAPN10-208	ENST00000404753	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.03	■■■□□ 2.72
CAPN10-208	ENST00000404753	C11orf95	C9JLR9	678 aa	Predicted RBP	32.01	■■■□□ 2.72
CAPN10-208	ENST00000404753	BRPF3	Q9ULD4	1205 aa		32.01	■■■□□ 2.72
CAPN10-208	ENST00000404753	WASHC2C	Q9Y4E1	1318 aa		32.01	■■■□□ 2.71
CAPN10-208	ENST00000404753	WDR62	O43379	1518 aa		32	■■■□□ 2.71
CAPN10-208	ENST00000404753	MAP3K1	Q13233	1512 aa		32	■■■□□ 2.71
CAPN10-208	ENST00000404753	THOC2	Q8NI27	1593 aa	Known RBP	31.97	■■■□□ 2.71
CAPN10-208	ENST00000404753	KDM5B	Q9UGL1	1544 aa		31.97	■■■□□ 2.71
CAPN10-208	ENST00000404753	EIF5B	O60841	1220 aa	Known RBP	31.96	■■■□□ 2.71
CAPN10-208	ENST00000404753	CNTLN	Q9NXG0	1405 aa		31.96	■■■□□ 2.71
CAPN10-208	ENST00000404753	TARBP1	Q13395	1621 aa	Known RBP	31.94	■■■□□ 2.7
CAPN10-208	ENST00000404753	USP35	Q9P2H5	1018 aa		31.93	■■■□□ 2.7
CAPN10-208	ENST00000404753	NCOA2	Q15596	1464 aa		31.9	■■■□□ 2.7
CAPN10-208	ENST00000404753	CARMIL1	Q5VZK9	1371 aa		31.89	■■■□□ 2.7
CAPN10-208	ENST00000404753	AQR	O60306	1485 aa	Known RBP eCLIP	31.88	■■■□□ 2.69	5e-8	■■■■■ 30.3
CAPN10-208	ENST00000404753	SMG6	Q86US8	1419 aa	Known RBP	31.87	■■■□□ 2.69
CAPN10-208	ENST00000404753	RNF123	Q5XPI4	1314 aa		31.87	■■■□□ 2.69
CAPN10-208	ENST00000404753	SENP3-EIF4A1	A0A087X0R7	540 aa		31.86	■■■□□ 2.69
CAPN10-208	ENST00000404753	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.86	■■■□□ 2.69
CAPN10-208	ENST00000404753	CCDC18	Q5T9S5	1454 aa		31.86	■■■□□ 2.69
CAPN10-208	ENST00000404753	GAPVD1	Q14C86	1478 aa		31.85	■■■□□ 2.69
CAPN10-208	ENST00000404753	ZNF608	Q9ULD9	1512 aa	Predicted RBP	31.85	■■■□□ 2.69
CAPN10-208	ENST00000404753	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.83	■■■□□ 2.69
CAPN10-208	ENST00000404753	ABCA5	Q8WWZ7	1642 aa		31.82	■■■□□ 2.68
CAPN10-208	ENST00000404753	NUDC	Q9Y266	331 aa		31.82	■■■□□ 2.68
CAPN10-208	ENST00000404753	UACA	Q9BZF9	1416 aa		31.81	■■■□□ 2.68
CAPN10-208	ENST00000404753	IFT140	Q96RY7	1462 aa		31.76	■■■□□ 2.67
CAPN10-208	ENST00000404753	P3H3	Q8IVL6	736 aa		31.75	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms