RNA–Protein interactions for RNA: ENST00000404753.7

CAPN10-208, Transcript of calpain 10, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPN10, Length 2,570 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-208ENST00000404753 SF3B1O75533 1304 aaKnown RBP eCLIP24.62■■□□□ 1.531e-7■■■■■ 172.3
CAPN10-208ENST00000404753 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.53■■□□□ 1.364e-10■■■■■ 86.3
CAPN10-208ENST00000404753 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.95■■□□□ 1.586e-6■■■■■ 48.1
CAPN10-208ENST00000404753 U2AF2P26368 475 aaKnown RBP eCLIP28.93■■■□□ 2.224e-7■■■■■ 30.7
CAPN10-208ENST00000404753 AQRO60306 1485 aaKnown RBP eCLIP31.88■■■□□ 2.695e-8■■■■■ 30.3
CAPN10-208ENST00000404753 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.63■■□□□ 1.371e-6■■■■■ 29.9
CAPN10-208ENST00000404753 SF3A3Q12874 501 aaKnown RBP eCLIP26.19■■□□□ 1.782e-6■■■■□ 26
CAPN10-208ENST00000404753 RBM22Q9NW64 420 aaKnown RBP eCLIP23.05■■□□□ 1.281e-6■■■■□ 23.7
CAPN10-208ENST00000404753 SF3B4Q15427 424 aaKnown RBP eCLIP24.17■■□□□ 1.461e-6■■■■□ 21.1
CAPN10-208ENST00000404753 EFTUD2Q15029 972 aaKnown RBP eCLIP24.9■■□□□ 1.581e-6■■■■□ 19.8
CAPN10-208ENST00000404753 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.41■■■□□ 2.35e-6■■■■□ 19.5
CAPN10-208ENST00000404753 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.97■□□□□ 0.318e-7■■■□□ 18
CAPN10-208ENST00000404753 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.73■■□□□ 1.711e-6■■■□□ 15
CAPN10-208ENST00000404753 PRPF4O43172 522 aaKnown RBP eCLIP25.07■■□□□ 1.64e-6■■□□□ 13.6
CAPN10-208ENST00000404753 PPIGQ13427 754 aaKnown RBP eCLIP22.77■■□□□ 1.248e-7■■□□□ 13.5
CAPN10-208ENST00000404753 NCBP2P52298 156 aaKnown RBP eCLIP21.7■■□□□ 1.062e-9■□□□□ 8.7
CAPN10-208ENST00000404753 NKRFO15226 690 aaKnown RBP eCLIP26.16■■□□□ 1.782e-6■□□□□ 8.4
Retrieved 17 of 17 RNA–protein pairs in 5.2 ms