RNA–Protein interactions for RNA: ENST00000403825.7

IFRD1-202, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 2,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-202ENST00000403825 RTN4Q9NQC3 1192 aaKnown RBP22.72■■□□□ 1.23
IFRD1-202ENST00000403825 NBR1Q14596 966 aa22.71■■□□□ 1.23
IFRD1-202ENST00000403825 RRBP1Q9P2E9 1410 aaKnown RBP22.7■■□□□ 1.22
IFRD1-202ENST00000403825 RSPH6AQ9H0K4 717 aa22.65■■□□□ 1.22
IFRD1-202ENST00000403825 PPP1R15AO75807 674 aaPredicted RBP22.63■■□□□ 1.21
IFRD1-202ENST00000403825 WASHC2AQ641Q2 1341 aa22.62■■□□□ 1.21
IFRD1-202ENST00000403825 WASHC2CQ9Y4E1 1318 aa22.58■■□□□ 1.21
IFRD1-202ENST00000403825 MAPKBP1O60336 1514 aa22.57■■□□□ 1.2
IFRD1-202ENST00000403825 DDX10Q13206 875 aaKnown RBP22.54■■□□□ 1.2
IFRD1-202ENST00000403825 PAK3O75914 559 aaPredicted RBP22.53■■□□□ 1.2
IFRD1-202ENST00000403825 USP35Q9P2H5 1018 aa22.53■■□□□ 1.2
IFRD1-202ENST00000403825 ZMYND15Q9H091 742 aa22.52■■□□□ 1.2
IFRD1-202ENST00000403825 SMARCA4P51532 1647 aa22.51■■□□□ 1.19
IFRD1-202ENST00000403825 TRIM52Q96A61 297 aa22.5■■□□□ 1.19
IFRD1-202ENST00000403825 ANP32CO43423 234 aa22.49■■□□□ 1.19
IFRD1-202ENST00000403825 TIMELESSQ9UNS1 1208 aa22.49■■□□□ 1.19
IFRD1-202ENST00000403825 RAPGEF2Q9Y4G8 1499 aa22.48■■□□□ 1.19
IFRD1-202ENST00000403825 DNAJC5BQ9UF47 199 aa22.47■■□□□ 1.19
IFRD1-202ENST00000403825 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
IFRD1-202ENST00000403825 CCNB3Q8WWL7 1395 aa22.44■■□□□ 1.18
IFRD1-202ENST00000403825 PPP4R2Q9NY27 417 aa22.43■■□□□ 1.18
IFRD1-202ENST00000403825 SYNJ1O43426 1573 aa22.43■■□□□ 1.18
IFRD1-202ENST00000403825 IPO9Q96P70 1041 aaKnown RBP22.42■■□□□ 1.18
IFRD1-202ENST00000403825 ARAP1Q96P48 1450 aa22.42■■□□□ 1.18
IFRD1-202ENST00000403825 RAB3GAP2Q9H2M9 1393 aa22.38■■□□□ 1.17
IFRD1-202ENST00000403825 ERICH3Q5RHP9 1530 aa22.37■■□□□ 1.17
IFRD1-202ENST00000403825 VSIG10Q8N0Z9 540 aa22.36■■□□□ 1.17
IFRD1-202ENST00000403825 ANP32AP39687 249 aaKnown RBP22.36■■□□□ 1.17
IFRD1-202ENST00000403825 KANK4Q5T7N3 995 aaPredicted RBP22.35■■□□□ 1.17
IFRD1-202ENST00000403825 ZBTB47Q9UFB7 747 aaPredicted RBP22.35■■□□□ 1.17
IFRD1-202ENST00000403825 FAM43AQ8N2R8 423 aa22.28■■□□□ 1.16
IFRD1-202ENST00000403825 SETD5Q9C0A6 1442 aa22.28■■□□□ 1.16
IFRD1-202ENST00000403825 BRPF3Q9ULD4 1205 aa22.24■■□□□ 1.15
IFRD1-202ENST00000403825 PRXQ9BXM0 1461 aa22.22■■□□□ 1.15
IFRD1-202ENST00000403825 HNRNPUQ00839 825 aaKnown RBP eCLIP22.22■■□□□ 1.15
IFRD1-202ENST00000403825 NEFMP07197 916 aa22.2■■□□□ 1.15
IFRD1-202ENST00000403825 IRX6P78412 446 aaPredicted RBP22.2■■□□□ 1.15
IFRD1-202ENST00000403825 MAP3K1Q13233 1512 aa22.18■■□□□ 1.14
IFRD1-202ENST00000403825 PPM1GO15355 546 aaPredicted RBP22.17■■□□□ 1.14
IFRD1-202ENST00000403825 FGD1P98174 961 aa22.16■■□□□ 1.14
IFRD1-202ENST00000403825 RRP9O43818 475 aaKnown RBP22.14■■□□□ 1.14
IFRD1-202ENST00000403825 SIN3AQ96ST3 1273 aa22.13■■□□□ 1.13
IFRD1-202ENST00000403825 GSE1Q14687 1217 aa22.13■■□□□ 1.13
IFRD1-202ENST00000403825 AAMPQ13685 434 aa22.11■■□□□ 1.13
IFRD1-202ENST00000403825 PDE4CQ08493 712 aa22.1■■□□□ 1.13
IFRD1-202ENST00000403825 TOP2BQ02880 1626 aa22.1■■□□□ 1.13
IFRD1-202ENST00000403825 PEG3Q9GZU2 1588 aa22.09■■□□□ 1.13
IFRD1-202ENST00000403825 B4GALNT3Q6L9W6 998 aa22.08■■□□□ 1.12
IFRD1-202ENST00000403825 NCAPD3P42695 1498 aa22.06■■□□□ 1.12
IFRD1-202ENST00000403825 RBM10P98175 930 aaKnown RBP22.06■■□□□ 1.12
IFRD1-202ENST00000403825 RANGAP1P46060 587 aaPredicted RBP22.05■■□□□ 1.12
IFRD1-202ENST00000403825 FHAD1B1AJZ9 1412 aa22.03■■□□□ 1.12
IFRD1-202ENST00000403825 HSP90AA2PQ14568 343 aaPredicted RBP22.03■■□□□ 1.12
IFRD1-202ENST00000403825 TIAM1Q13009 1591 aa22.03■■□□□ 1.12
IFRD1-202ENST00000403825 BIVM-ERCC5R4GMW8 1640 aa22.03■■□□□ 1.12
IFRD1-202ENST00000403825 HIRIP3Q9BW71 556 aaPredicted RBP22.01■■□□□ 1.11
IFRD1-202ENST00000403825 ZBED9Q6R2W3 1325 aa22.01■■□□□ 1.11
IFRD1-202ENST00000403825 ARHGAP35Q9NRY4 1499 aa22.01■■□□□ 1.11
IFRD1-202ENST00000403825 PDIA4P13667 645 aaKnown RBP21.95■■□□□ 1.1
IFRD1-202ENST00000403825 NCOA2Q15596 1464 aa21.95■■□□□ 1.1
IFRD1-202ENST00000403825 TONSLQ96HA7 1378 aa21.94■■□□□ 1.1
IFRD1-202ENST00000403825 A0A0U1RQG5 324 aaPredicted RBP21.94■■□□□ 1.1
IFRD1-202ENST00000403825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.93■■□□□ 1.1
IFRD1-202ENST00000403825 LRRC9Q6ZRR7 1453 aa21.92■■□□□ 1.1
IFRD1-202ENST00000403825 RNF123Q5XPI4 1314 aa21.91■■□□□ 1.1
IFRD1-202ENST00000403825 HSP90AA1P07900 732 aaKnown RBP21.89■■□□□ 1.09
IFRD1-202ENST00000403825 LAS1LQ9Y4W2 734 aaKnown RBP21.88■■□□□ 1.09
IFRD1-202ENST00000403825 SMG6Q86US8 1419 aaKnown RBP21.88■■□□□ 1.09
IFRD1-202ENST00000403825 PHLDB1Q86UU1 1377 aa21.87■■□□□ 1.09
IFRD1-202ENST00000403825 CNTLNQ9NXG0 1405 aa21.87■■□□□ 1.09
IFRD1-202ENST00000403825 KDM5BQ9UGL1 1544 aa21.86■■□□□ 1.09
IFRD1-202ENST00000403825 FRAT1Q92837 279 aaPredicted RBP21.85■■□□□ 1.09
IFRD1-202ENST00000403825 CFAP43Q8NDM7 1665 aa21.83■■□□□ 1.09
IFRD1-202ENST00000403825 CENPJQ9HC77 1338 aaPredicted RBP21.83■■□□□ 1.08
IFRD1-202ENST00000403825 CALD1Q05682 793 aaKnown RBP21.78■■□□□ 1.08
IFRD1-202ENST00000403825 UACAQ9BZF9 1416 aa21.78■■□□□ 1.08
IFRD1-202ENST00000403825 KIF27Q86VH2 1401 aa21.77■■□□□ 1.08
IFRD1-202ENST00000403825 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
IFRD1-202ENST00000403825 PRKRIP1Q9H875 184 aaPredicted RBP21.77■■□□□ 1.08
IFRD1-202ENST00000403825 CCDC184Q52MB2 194 aa21.76■■□□□ 1.07
IFRD1-202ENST00000403825 NFKBIBQ15653 356 aa21.74■■□□□ 1.07
IFRD1-202ENST00000403825 FAM50AQ14320 339 aaKnown RBP21.73■■□□□ 1.07
IFRD1-202ENST00000403825 DDRGK1Q96HY6 314 aa21.73■■□□□ 1.07
IFRD1-202ENST00000403825 NUDCQ9Y266 331 aa21.71■■□□□ 1.07
IFRD1-202ENST00000403825 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
IFRD1-202ENST00000403825 TCERG1O14776 1098 aaKnown RBP21.71■■□□□ 1.07
IFRD1-202ENST00000403825 BCL11BQ9C0K0 894 aaPredicted RBP21.7■■□□□ 1.06
IFRD1-202ENST00000403825 MRS2Q9HD23 443 aa21.7■■□□□ 1.06
IFRD1-202ENST00000403825 RRAGDQ9NQL2 400 aaPredicted RBP21.7■■□□□ 1.06
IFRD1-202ENST00000403825 PRDM4Q9UKN5 801 aa21.7■■□□□ 1.06
IFRD1-202ENST00000403825 AKNAQ7Z591 1439 aa21.7■■□□□ 1.06
IFRD1-202ENST00000403825 HSPA5P11021 654 aaKnown RBP21.69■■□□□ 1.06
IFRD1-202ENST00000403825 DCAF11Q8TEB1 546 aa21.69■■□□□ 1.06
IFRD1-202ENST00000403825 NCOA1Q15788 1441 aa21.69■■□□□ 1.06
IFRD1-202ENST00000403825 FAM9BQ8IZU0 186 aa21.68■■□□□ 1.06
IFRD1-202ENST00000403825 HFM1A2PYH4 1435 aa21.68■■□□□ 1.06
IFRD1-202ENST00000403825 ABCA5Q8WWZ7 1642 aa21.68■■□□□ 1.06
IFRD1-202ENST00000403825 TAF7LQ5H9L4 462 aa21.68■■□□□ 1.06
IFRD1-202ENST00000403825 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
IFRD1-202ENST00000403825 NAP1L5Q96NT1 182 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms