RNA–Protein interactions for RNA: ENST00000402412.5

R3HDM2-204, Transcript of R3H domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,372 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-204ENST00000402412 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
R3HDM2-204ENST00000402412 CHIC2Q9UKJ5 165 aa19.1■□□□□ 0.65
R3HDM2-204ENST00000402412 GOLGA3Q08378 1498 aa19.1■□□□□ 0.65
R3HDM2-204ENST00000402412 CEP164Q9UPV0 1460 aa19.1■□□□□ 0.65
R3HDM2-204ENST00000402412 IRX6P78412 446 aaPredicted RBP19.09■□□□□ 0.65
R3HDM2-204ENST00000402412 SCAF1Q9H7N4 1312 aaKnown RBP19.08■□□□□ 0.65
R3HDM2-204ENST00000402412 CDK11AQ9UQ88 783 aaPredicted RBP19.08■□□□□ 0.65
R3HDM2-204ENST00000402412 CUX1P39880 1505 aa19.08■□□□□ 0.65
R3HDM2-204ENST00000402412 FAM9BQ8IZU0 186 aa19.07■□□□□ 0.64
R3HDM2-204ENST00000402412 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
R3HDM2-204ENST00000402412 MIER1Q8N108 512 aa19.04■□□□□ 0.64
R3HDM2-204ENST00000402412 TNIKQ9UKE5 1360 aa19.04■□□□□ 0.64
R3HDM2-204ENST00000402412 HNRNPUQ00839 825 aaKnown RBP eCLIP19.02■□□□□ 0.64
R3HDM2-204ENST00000402412 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
R3HDM2-204ENST00000402412 CUX2O14529 1486 aa19.02■□□□□ 0.64
R3HDM2-204ENST00000402412 BIVM-ERCC5R4GMW8 1640 aa19.01■□□□□ 0.63
R3HDM2-204ENST00000402412 FGD5Q6ZNL6 1462 aa18.98■□□□□ 0.63
R3HDM2-204ENST00000402412 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
R3HDM2-204ENST00000402412 CEP162Q5TB80 1403 aa18.96■□□□□ 0.63
R3HDM2-204ENST00000402412 ERCC6Q03468 1493 aa18.93■□□□□ 0.62
R3HDM2-204ENST00000402412 CANXP27824 592 aaKnown RBP18.92■□□□□ 0.62
R3HDM2-204ENST00000402412 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
R3HDM2-204ENST00000402412 TOPBP1Q92547 1522 aa18.91■□□□□ 0.62
R3HDM2-204ENST00000402412 CHGAP10645 457 aaKnown RBP18.91■□□□□ 0.62
R3HDM2-204ENST00000402412 KDM2AQ9Y2K7 1162 aa18.87■□□□□ 0.61
R3HDM2-204ENST00000402412 CLIP1P30622 1438 aa18.87■□□□□ 0.61
R3HDM2-204ENST00000402412 RAPGEF2Q9Y4G8 1499 aa18.86■□□□□ 0.61
R3HDM2-204ENST00000402412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.616e-7■■□□□ 13.2
R3HDM2-204ENST00000402412 CARMIL1Q5VZK9 1371 aa18.85■□□□□ 0.61
R3HDM2-204ENST00000402412 KIF21BO75037 1637 aa18.85■□□□□ 0.61
R3HDM2-204ENST00000402412 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
R3HDM2-204ENST00000402412 POLA1P09884 1462 aaPredicted RBP18.83■□□□□ 0.61
R3HDM2-204ENST00000402412 ARXQ96QS3 562 aa18.83■□□□□ 0.6
R3HDM2-204ENST00000402412 NBR1Q14596 966 aa18.82■□□□□ 0.6
R3HDM2-204ENST00000402412 IGF1RP08069 1367 aa18.81■□□□□ 0.6
R3HDM2-204ENST00000402412 TDRD9Q8NDG6 1382 aaKnown RBP18.79■□□□□ 0.6
R3HDM2-204ENST00000402412 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
R3HDM2-204ENST00000402412 MRC2Q9UBG0 1479 aa18.79■□□□□ 0.6
R3HDM2-204ENST00000402412 TONSLQ96HA7 1378 aa18.78■□□□□ 0.6
R3HDM2-204ENST00000402412 PRXQ9BXM0 1461 aa18.77■□□□□ 0.59
R3HDM2-204ENST00000402412 PLEKHG5O94827 1062 aa18.76■□□□□ 0.59
R3HDM2-204ENST00000402412 ERICH3Q5RHP9 1530 aa18.75■□□□□ 0.59
R3HDM2-204ENST00000402412 RRP7BPQ9NSQ0 103 aa18.74■□□□□ 0.59
R3HDM2-204ENST00000402412 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
R3HDM2-204ENST00000402412 EIF5BO60841 1220 aaKnown RBP18.73■□□□□ 0.59
R3HDM2-204ENST00000402412 ZBTB47Q9UFB7 747 aaPredicted RBP18.71■□□□□ 0.59
R3HDM2-204ENST00000402412 ANP32AP39687 249 aaKnown RBP18.7■□□□□ 0.58
R3HDM2-204ENST00000402412 MRS2Q9HD23 443 aa18.7■□□□□ 0.58
R3HDM2-204ENST00000402412 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
R3HDM2-204ENST00000402412 GAPVD1Q14C86 1478 aa18.68■□□□□ 0.58
R3HDM2-204ENST00000402412 TMC1Q8TDI8 760 aa18.67■□□□□ 0.58
R3HDM2-204ENST00000402412 CCDC136Q96JN2 1154 aa18.64■□□□□ 0.57
R3HDM2-204ENST00000402412 RGL3Q3MIN7 710 aa18.62■□□□□ 0.57
R3HDM2-204ENST00000402412 SIN3AQ96ST3 1273 aa18.62■□□□□ 0.57
R3HDM2-204ENST00000402412 VPS8Q8N3P4 1428 aa18.62■□□□□ 0.57
R3HDM2-204ENST00000402412 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
R3HDM2-204ENST00000402412 AQRO60306 1485 aaKnown RBP eCLIP18.57■□□□□ 0.564e-7■■■■□ 20.6
R3HDM2-204ENST00000402412 CHMP7Q8WUX9 453 aaPredicted RBP18.55■□□□□ 0.56
R3HDM2-204ENST00000402412 NEFMP07197 916 aa18.55■□□□□ 0.56
R3HDM2-204ENST00000402412 STAG3Q9UJ98 1225 aa18.53■□□□□ 0.56
R3HDM2-204ENST00000402412 KCNH8Q96L42 1107 aa18.53■□□□□ 0.56
R3HDM2-204ENST00000402412 GRIN2BQ13224 1484 aa18.51■□□□□ 0.55
R3HDM2-204ENST00000402412 CUL7Q14999 1698 aa18.51■□□□□ 0.55
R3HDM2-204ENST00000402412 SUPT16HQ9Y5B9 1047 aaKnown RBP18.51■□□□□ 0.55
R3HDM2-204ENST00000402412 WDR62O43379 1518 aa18.49■□□□□ 0.55
R3HDM2-204ENST00000402412 HSP90AA1P07900 732 aaKnown RBP18.49■□□□□ 0.55
R3HDM2-204ENST00000402412 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
R3HDM2-204ENST00000402412 MTUS2Q5JR59 1369 aa18.46■□□□□ 0.55
R3HDM2-204ENST00000402412 TSPY4P0CV99 314 aa18.43■□□□□ 0.54
R3HDM2-204ENST00000402412 TSPY10P0CW01 314 aa18.43■□□□□ 0.54
R3HDM2-204ENST00000402412 ARHGAP35Q9NRY4 1499 aa18.42■□□□□ 0.54
R3HDM2-204ENST00000402412 ABCA5Q8WWZ7 1642 aa18.42■□□□□ 0.54
R3HDM2-204ENST00000402412 NEUROD2Q15784 382 aa18.41■□□□□ 0.54
R3HDM2-204ENST00000402412 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
R3HDM2-204ENST00000402412 ZNF608Q9ULD9 1512 aaPredicted RBP18.41■□□□□ 0.54
R3HDM2-204ENST00000402412 ARAP1Q96P48 1450 aa18.41■□□□□ 0.54
R3HDM2-204ENST00000402412 EIF4G2P78344 907 aaKnown RBP eCLIP18.39■□□□□ 0.533e-8■■■■□ 20.2
R3HDM2-204ENST00000402412 ESF1Q9H501 851 aaKnown RBP18.38■□□□□ 0.53
R3HDM2-204ENST00000402412 FHOD3Q2V2M9 1422 aa18.37■□□□□ 0.53
R3HDM2-204ENST00000402412 WDR97A6NE52 1622 aa18.36■□□□□ 0.53
R3HDM2-204ENST00000402412 WDR43Q15061 677 aaKnown RBP eCLIP18.35■□□□□ 0.53
R3HDM2-204ENST00000402412 SNAPC4Q5SXM2 1469 aa18.35■□□□□ 0.53
R3HDM2-204ENST00000402412 FMN1Q68DA7 1419 aa18.34■□□□□ 0.53
R3HDM2-204ENST00000402412 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.53
R3HDM2-204ENST00000402412 ZBTB7CA1YPR0 619 aa18.32■□□□□ 0.52
R3HDM2-204ENST00000402412 B4GALNT3Q6L9W6 998 aa18.32■□□□□ 0.52
R3HDM2-204ENST00000402412 EFCAB5A4FU69 1503 aa18.32■□□□□ 0.52
R3HDM2-204ENST00000402412 TPRNQ4KMQ1 711 aa18.31■□□□□ 0.52
R3HDM2-204ENST00000402412 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
R3HDM2-204ENST00000402412 PPM1GO15355 546 aaPredicted RBP18.31■□□□□ 0.52
R3HDM2-204ENST00000402412 RTN4Q9NQC3 1192 aaKnown RBP18.31■□□□□ 0.52
R3HDM2-204ENST00000402412 A0A0G2JS52 829 aa18.3■□□□□ 0.52
R3HDM2-204ENST00000402412 KANK4Q5T7N3 995 aaPredicted RBP18.3■□□□□ 0.52
R3HDM2-204ENST00000402412 FOXD1Q16676 465 aa18.28■□□□□ 0.52
R3HDM2-204ENST00000402412 MAGI1Q96QZ7 1491 aaPredicted RBP18.28■□□□□ 0.52
R3HDM2-204ENST00000402412 PBRM1Q86U86 1689 aa18.27■□□□□ 0.52
R3HDM2-204ENST00000402412 ADAMTS12P58397 1594 aa18.26■□□□□ 0.51
R3HDM2-204ENST00000402412 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
R3HDM2-204ENST00000402412 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
R3HDM2-204ENST00000402412 UPF2Q9HAU5 1272 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms