RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 CUX1P39880 1505 aa9.91□□□□□ -0.82
CLIP4-202ENST00000401605 ARHGEF11O15085 1522 aa9.88□□□□□ -0.83
CLIP4-202ENST00000401605 CHMP7Q8WUX9 453 aaPredicted RBP9.88□□□□□ -0.83
CLIP4-202ENST00000401605 WDR97A6NE52 1622 aa9.87□□□□□ -0.83
CLIP4-202ENST00000401605 VSIG10Q8N0Z9 540 aa9.87□□□□□ -0.83
CLIP4-202ENST00000401605 GRIN2BQ13224 1484 aa9.86□□□□□ -0.83
CLIP4-202ENST00000401605 SNAPC4Q5SXM2 1469 aa9.86□□□□□ -0.83
CLIP4-202ENST00000401605 MAGI1Q96QZ7 1491 aaPredicted RBP9.86□□□□□ -0.83
CLIP4-202ENST00000401605 CYB5RLQ6IPT4 315 aa9.85□□□□□ -0.83
CLIP4-202ENST00000401605 RIMBP3CA6NJZ7 1639 aa9.85□□□□□ -0.83
CLIP4-202ENST00000401605 RIMBP3BA6NNM3 1639 aa9.85□□□□□ -0.83
CLIP4-202ENST00000401605 RIMBP3Q9UFD9 1639 aa9.85□□□□□ -0.83
CLIP4-202ENST00000401605 BCL11AQ9H165 835 aa9.84□□□□□ -0.83
CLIP4-202ENST00000401605 KDM2AQ9Y2K7 1162 aa9.83□□□□□ -0.84
CLIP4-202ENST00000401605 GTF3C3Q9Y5Q9 886 aa9.83□□□□□ -0.84
CLIP4-202ENST00000401605 WRNQ14191 1432 aaPredicted RBP eCLIP9.83□□□□□ -0.84
CLIP4-202ENST00000401605 GAPVD1Q14C86 1478 aa9.83□□□□□ -0.84
CLIP4-202ENST00000401605 ABCA10Q8WWZ4 1543 aa9.83□□□□□ -0.84
CLIP4-202ENST00000401605 SYNJ2O15056 1496 aa9.82□□□□□ -0.84
CLIP4-202ENST00000401605 POTEDQ86YR6 584 aa9.81□□□□□ -0.84
CLIP4-202ENST00000401605 HOMEZQ8IX15 550 aa9.81□□□□□ -0.84
CLIP4-202ENST00000401605 ARAP1Q96P48 1450 aa9.79□□□□□ -0.84
CLIP4-202ENST00000401605 CHD1O14646 1710 aa9.79□□□□□ -0.84
CLIP4-202ENST00000401605 EIF5BO60841 1220 aaKnown RBP9.78□□□□□ -0.84
CLIP4-202ENST00000401605 SYNJ1O43426 1573 aa9.78□□□□□ -0.84
CLIP4-202ENST00000401605 CLASP1Q7Z460 1538 aa9.77□□□□□ -0.85
CLIP4-202ENST00000401605 TOP2BQ02880 1626 aa9.75□□□□□ -0.85
CLIP4-202ENST00000401605 ABCA5Q8WWZ7 1642 aa9.75□□□□□ -0.85
CLIP4-202ENST00000401605 CNKSR2Q8WXI2 1034 aa9.74□□□□□ -0.85
CLIP4-202ENST00000401605 TRHP20396 242 aaPredicted RBP9.73□□□□□ -0.85
CLIP4-202ENST00000401605 FHAD1B1AJZ9 1412 aa9.72□□□□□ -0.85
CLIP4-202ENST00000401605 GRIN2AQ12879 1464 aa9.72□□□□□ -0.85
CLIP4-202ENST00000401605 BIVM-ERCC5R4GMW8 1640 aa9.71□□□□□ -0.85
CLIP4-202ENST00000401605 NUP160Q12769 1436 aa9.71□□□□□ -0.86
CLIP4-202ENST00000401605 PBRM1Q86U86 1689 aa9.69□□□□□ -0.86
CLIP4-202ENST00000401605 ERICH3Q5RHP9 1530 aa9.69□□□□□ -0.86
CLIP4-202ENST00000401605 ADAMTS12P58397 1594 aa9.68□□□□□ -0.86
CLIP4-202ENST00000401605 CEP170Q5SW79 1584 aa9.64□□□□□ -0.87
CLIP4-202ENST00000401605 JPH4Q96JJ6 628 aa9.64□□□□□ -0.87
CLIP4-202ENST00000401605 TMEM132AQ24JP5 1023 aa9.63□□□□□ -0.87
CLIP4-202ENST00000401605 KIF27Q86VH2 1401 aa9.63□□□□□ -0.87
CLIP4-202ENST00000401605 IGF1RP08069 1367 aa9.62□□□□□ -0.87
CLIP4-202ENST00000401605 FAM9AQ8IZU1 332 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-202ENST00000401605 PIAS4Q8N2W9 510 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-202ENST00000401605 PRG4Q92954 1404 aaPredicted RBP9.61□□□□□ -0.87
CLIP4-202ENST00000401605 ERCC6L2Q5T890 1561 aa9.6□□□□□ -0.87
CLIP4-202ENST00000401605 RANGAP1P46060 587 aaPredicted RBP9.59□□□□□ -0.87
CLIP4-202ENST00000401605 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
CLIP4-202ENST00000401605 SHROOM2Q13796 1616 aa9.58□□□□□ -0.88
CLIP4-202ENST00000401605 KIAA0586Q9BVV6 1533 aa9.56□□□□□ -0.88
CLIP4-202ENST00000401605 CARMIL1Q5VZK9 1371 aa9.56□□□□□ -0.88
CLIP4-202ENST00000401605 C14orf37Q86TY3 774 aa9.54□□□□□ -0.88
CLIP4-202ENST00000401605 RUSC2Q8N2Y8 1516 aa9.54□□□□□ -0.88
CLIP4-202ENST00000401605 NPM1P06748 294 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLIP4-202ENST00000401605 CUL7Q14999 1698 aa9.52□□□□□ -0.89
CLIP4-202ENST00000401605 ATXN8OSP0DMR3 200 aa9.51□□□□□ -0.89
CLIP4-202ENST00000401605 SLC4A2P04920 1241 aa9.5□□□□□ -0.89
CLIP4-202ENST00000401605 PAXIP1Q6ZW49 1069 aaPredicted RBP9.5□□□□□ -0.89
CLIP4-202ENST00000401605 PTPRGP23470 1445 aa9.48□□□□□ -0.89
CLIP4-202ENST00000401605 CARMIL2Q6F5E8 1435 aa9.48□□□□□ -0.89
CLIP4-202ENST00000401605 PKD2Q13563 968 aa9.48□□□□□ -0.89
CLIP4-202ENST00000401605 CFAP44Q96MT7 982 aa9.48□□□□□ -0.89
CLIP4-202ENST00000401605 FAM69CQ0P6D2 419 aa9.47□□□□□ -0.89
CLIP4-202ENST00000401605 TNIKQ9UKE5 1360 aa9.46□□□□□ -0.89
CLIP4-202ENST00000401605 RAPGEF2Q9Y4G8 1499 aa9.46□□□□□ -0.9
CLIP4-202ENST00000401605 KLHL34Q8N239 644 aa9.45□□□□□ -0.9
CLIP4-202ENST00000401605 ABCC10Q5T3U5 1492 aa9.45□□□□□ -0.9
CLIP4-202ENST00000401605 MAPKBP1O60336 1514 aa9.45□□□□□ -0.9
CLIP4-202ENST00000401605 TSHZ2Q9NRE2 1034 aa9.44□□□□□ -0.9
CLIP4-202ENST00000401605 IQGAP2Q13576 1575 aa9.43□□□□□ -0.9
CLIP4-202ENST00000401605 CENPBP07199 599 aaPredicted RBP9.42□□□□□ -0.9
CLIP4-202ENST00000401605 ADCY10Q96PN6 1610 aa9.42□□□□□ -0.9
CLIP4-202ENST00000401605 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
CLIP4-202ENST00000401605 HRCP23327 699 aa9.4□□□□□ -0.9
CLIP4-202ENST00000401605 ABCC2Q92887 1545 aa9.4□□□□□ -0.9
CLIP4-202ENST00000401605 SCAF1Q9H7N4 1312 aaKnown RBP9.4□□□□□ -0.9
CLIP4-202ENST00000401605 UACAQ9BZF9 1416 aa9.4□□□□□ -0.9
CLIP4-202ENST00000401605 BBXQ8WY36 941 aaPredicted RBP9.4□□□□□ -0.9
CLIP4-202ENST00000401605 DISP1Q96F81 1524 aa9.4□□□□□ -0.9
CLIP4-202ENST00000401605 UGGT2Q9NYU1 1516 aa9.39□□□□□ -0.91
CLIP4-202ENST00000401605 UHRF1BP1LA0JNW5 1464 aa9.39□□□□□ -0.91
CLIP4-202ENST00000401605 NBR1Q14596 966 aa9.38□□□□□ -0.91
CLIP4-202ENST00000401605 PLB1Q6P1J6 1458 aa9.38□□□□□ -0.91
CLIP4-202ENST00000401605 PRXQ9BXM0 1461 aa9.38□□□□□ -0.91
CLIP4-202ENST00000401605 DIP2BQ9P265 1576 aa9.38□□□□□ -0.91
CLIP4-202ENST00000401605 IFNLR1Q8IU57 520 aaPredicted RBP9.37□□□□□ -0.91
CLIP4-202ENST00000401605 ASXL2Q76L83 1435 aa9.37□□□□□ -0.91
CLIP4-202ENST00000401605 PLEKHG5O94827 1062 aa9.37□□□□□ -0.91
CLIP4-202ENST00000401605 MYCNP04198 464 aaPredicted RBP9.36□□□□□ -0.91
CLIP4-202ENST00000401605 GOLGA3Q08378 1498 aa9.35□□□□□ -0.91
CLIP4-202ENST00000401605 KDM5BQ9UGL1 1544 aa9.34□□□□□ -0.91
CLIP4-202ENST00000401605 KIAA0556O60303 1618 aa9.34□□□□□ -0.91
CLIP4-202ENST00000401605 KIF13AQ9H1H9 1805 aa9.34□□□□□ -0.91
CLIP4-202ENST00000401605 VASPP50552 380 aaPredicted RBP9.33□□□□□ -0.92
CLIP4-202ENST00000401605 FBXO3Q9UK99 471 aa9.33□□□□□ -0.92
CLIP4-202ENST00000401605 UBE2Q2Q8WVN8 375 aa9.31□□□□□ -0.92
CLIP4-202ENST00000401605 EEA1Q15075 1411 aa9.31□□□□□ -0.92
CLIP4-202ENST00000401605 GLI2P10070 1586 aa9.3□□□□□ -0.92
CLIP4-202ENST00000401605 EPRSP07814 1512 aaKnown RBP9.3□□□□□ -0.92
CLIP4-202ENST00000401605 NPM2Q86SE8 214 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms