RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 CLEC11AQ9Y240 323 aa9.58□□□□□ -0.88
HMGB3P7-201ENST00000400214 EIF4G1Q04637 1599 aaKnown RBP9.54□□□□□ -0.88
HMGB3P7-201ENST00000400214 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
HMGB3P7-201ENST00000400214 FBLN2P98095 1184 aa9.53□□□□□ -0.88
HMGB3P7-201ENST00000400214 SSUH2Q9Y2M2 353 aa9.52□□□□□ -0.89
HMGB3P7-201ENST00000400214 POTEIP0CG38 1075 aa9.51□□□□□ -0.89
HMGB3P7-201ENST00000400214 CC2D2AQ9P2K1 1620 aa9.5□□□□□ -0.89
HMGB3P7-201ENST00000400214 PLSCR2Q9NRY7 297 aa9.5□□□□□ -0.89
HMGB3P7-201ENST00000400214 ATXN8OSP0DMR3 200 aa9.49□□□□□ -0.89
HMGB3P7-201ENST00000400214 RANGAP1P46060 587 aaPredicted RBP9.49□□□□□ -0.89
HMGB3P7-201ENST00000400214 CHADLQ6NUI6 762 aa9.48□□□□□ -0.89
HMGB3P7-201ENST00000400214 TMEM132AQ24JP5 1023 aa9.47□□□□□ -0.89
HMGB3P7-201ENST00000400214 MKRN4PQ13434 485 aaPredicted RBP9.44□□□□□ -0.9
HMGB3P7-201ENST00000400214 ZNF692Q9BU19 519 aaPredicted RBP9.43□□□□□ -0.9
HMGB3P7-201ENST00000400214 CECR2Q9BXF3 1484 aa9.4□□□□□ -0.9
HMGB3P7-201ENST00000400214 C14orf37Q86TY3 774 aa9.4□□□□□ -0.9
HMGB3P7-201ENST00000400214 CLCN6P51797 869 aa9.39□□□□□ -0.91
HMGB3P7-201ENST00000400214 PODXL2Q9NZ53 605 aa9.39□□□□□ -0.91
HMGB3P7-201ENST00000400214 CD44P16070 742 aaKnown RBP9.38□□□□□ -0.91
HMGB3P7-201ENST00000400214 SMARCA4P51532 1647 aa9.38□□□□□ -0.91
HMGB3P7-201ENST00000400214 BAZ1AQ9NRL2 1556 aaPredicted RBP9.37□□□□□ -0.91
HMGB3P7-201ENST00000400214 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
HMGB3P7-201ENST00000400214 PEG3Q9GZU2 1588 aa9.33□□□□□ -0.92
HMGB3P7-201ENST00000400214 NCAPD3P42695 1498 aa9.33□□□□□ -0.92
HMGB3P7-201ENST00000400214 PAXIP1Q6ZW49 1069 aaPredicted RBP9.32□□□□□ -0.92
HMGB3P7-201ENST00000400214 SMARCA2P51531 1590 aa9.32□□□□□ -0.92
HMGB3P7-201ENST00000400214 FARP1Q9Y4F1 1045 aaPredicted RBP9.31□□□□□ -0.92
HMGB3P7-201ENST00000400214 ATAD2BQ9ULI0 1458 aa9.3□□□□□ -0.92
HMGB3P7-201ENST00000400214 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.3□□□□□ -0.92
HMGB3P7-201ENST00000400214 CFAP44Q96MT7 982 aa9.29□□□□□ -0.92
HMGB3P7-201ENST00000400214 HMGXB3Q12766 1538 aa9.29□□□□□ -0.92
HMGB3P7-201ENST00000400214 MROH2BQ7Z745 1585 aa9.29□□□□□ -0.92
HMGB3P7-201ENST00000400214 BBXQ8WY36 941 aaPredicted RBP9.28□□□□□ -0.92
HMGB3P7-201ENST00000400214 DCBLD2Q96PD2 775 aa9.28□□□□□ -0.92
HMGB3P7-201ENST00000400214 PKD2Q13563 968 aa9.27□□□□□ -0.93
HMGB3P7-201ENST00000400214 ZNF579Q8NAF0 562 aaKnown RBP9.25□□□□□ -0.93
HMGB3P7-201ENST00000400214 OTUD5Q96G74 571 aa9.25□□□□□ -0.93
HMGB3P7-201ENST00000400214 NBR1Q14596 966 aa9.24□□□□□ -0.93
HMGB3P7-201ENST00000400214 TSHZ2Q9NRE2 1034 aa9.24□□□□□ -0.93
HMGB3P7-201ENST00000400214 KLHL34Q8N239 644 aa9.23□□□□□ -0.93
HMGB3P7-201ENST00000400214 FBXO3Q9UK99 471 aa9.23□□□□□ -0.93
HMGB3P7-201ENST00000400214 NPM1P06748 294 aaKnown RBP eCLIP9.22□□□□□ -0.93
HMGB3P7-201ENST00000400214 BAZ1BQ9UIG0 1483 aaKnown RBP9.21□□□□□ -0.93
HMGB3P7-201ENST00000400214 POTEMA6NI47 508 aa9.21□□□□□ -0.94
HMGB3P7-201ENST00000400214 WIZO95785 1651 aa9.2□□□□□ -0.94
HMGB3P7-201ENST00000400214 SUPT5HO00267 1087 aaKnown RBP9.19□□□□□ -0.94
HMGB3P7-201ENST00000400214 POTEB2H3BUK9 544 aa9.18□□□□□ -0.94
HMGB3P7-201ENST00000400214 RSF1Q96T23 1441 aaPredicted RBP9.18□□□□□ -0.94
HMGB3P7-201ENST00000400214 VASPP50552 380 aaPredicted RBP9.16□□□□□ -0.94
HMGB3P7-201ENST00000400214 POTEGQ6S5H5 508 aa9.16□□□□□ -0.94
HMGB3P7-201ENST00000400214 IFNLR1Q8IU57 520 aaPredicted RBP9.16□□□□□ -0.94
HMGB3P7-201ENST00000400214 GALR2O43603 387 aaPredicted RBP9.15□□□□□ -0.94
HMGB3P7-201ENST00000400214 NPM2Q86SE8 214 aaKnown RBP9.15□□□□□ -0.94
HMGB3P7-201ENST00000400214 ZRANB1Q9UGI0 708 aa9.14□□□□□ -0.95
HMGB3P7-201ENST00000400214 PCDH10Q9P2E7 1040 aa9.11□□□□□ -0.95
HMGB3P7-201ENST00000400214 TOP2AP11388 1531 aaKnown RBP9.1□□□□□ -0.95
HMGB3P7-201ENST00000400214 SPRYD3Q8NCJ5 442 aa9.1□□□□□ -0.95
HMGB3P7-201ENST00000400214 LAMC3Q9Y6N6 1575 aa9.09□□□□□ -0.95
HMGB3P7-201ENST00000400214 TRIM26Q12899 539 aaPredicted RBP9.08□□□□□ -0.96
HMGB3P7-201ENST00000400214 DNAJC5Q9H3Z4 198 aa9.08□□□□□ -0.96
HMGB3P7-201ENST00000400214 CREBZFQ9NS37 354 aa9.06□□□□□ -0.96
HMGB3P7-201ENST00000400214 NESP48681 1621 aa9.05□□□□□ -0.96
HMGB3P7-201ENST00000400214 UBTFP17480 764 aaKnown RBP9.05□□□□□ -0.96
HMGB3P7-201ENST00000400214 CADPSQ9ULU8 1353 aa9.02□□□□□ -0.97
HMGB3P7-201ENST00000400214 PELP1Q8IZL8 1130 aaKnown RBP9.02□□□□□ -0.97
HMGB3P7-201ENST00000400214 PRDM2Q13029 1718 aa9.02□□□□□ -0.97
HMGB3P7-201ENST00000400214 KIF21AQ7Z4S6 1674 aa9□□□□□ -0.97
HMGB3P7-201ENST00000400214 ECM2O94769 699 aaPredicted RBP8.99□□□□□ -0.97
HMGB3P7-201ENST00000400214 LCE2DQ5TA82 110 aaPredicted RBP8.99□□□□□ -0.97
HMGB3P7-201ENST00000400214 PHF12Q96QT6 1004 aa8.99□□□□□ -0.97
HMGB3P7-201ENST00000400214 CFTRP13569 1480 aa8.99□□□□□ -0.97
HMGB3P7-201ENST00000400214 ERCC6Q03468 1493 aa8.99□□□□□ -0.97
HMGB3P7-201ENST00000400214 PDS5BQ9NTI5 1447 aa8.98□□□□□ -0.97
HMGB3P7-201ENST00000400214 CCDC88BA6NC98 1476 aa8.98□□□□□ -0.97
HMGB3P7-201ENST00000400214 POTEJP0CG39 1038 aa8.97□□□□□ -0.97
HMGB3P7-201ENST00000400214 HRCP23327 699 aa8.97□□□□□ -0.97
HMGB3P7-201ENST00000400214 THOC2Q8NI27 1593 aaKnown RBP8.97□□□□□ -0.97
HMGB3P7-201ENST00000400214 CUX2O14529 1486 aa8.96□□□□□ -0.97
HMGB3P7-201ENST00000400214 ASTLQ6HA08 431 aaPredicted RBP8.96□□□□□ -0.98
HMGB3P7-201ENST00000400214 PAK3O75914 559 aaPredicted RBP8.95□□□□□ -0.98
HMGB3P7-201ENST00000400214 METRNQ9UJH8 293 aa8.95□□□□□ -0.98
HMGB3P7-201ENST00000400214 SPDYE4A6NLX3 237 aa8.93□□□□□ -0.98
HMGB3P7-201ENST00000400214 STAG3Q9UJ98 1225 aa8.93□□□□□ -0.98
HMGB3P7-201ENST00000400214 RGL2O15211 777 aa8.92□□□□□ -0.98
HMGB3P7-201ENST00000400214 PROM2Q8N271 834 aa8.92□□□□□ -0.98
HMGB3P7-201ENST00000400214 FANCD2Q9BXW9 1451 aa8.91□□□□□ -0.98
HMGB3P7-201ENST00000400214 MAMSTRQ6ZN01 415 aa8.91□□□□□ -0.98
HMGB3P7-201ENST00000400214 SLC39A7Q92504 469 aa8.91□□□□□ -0.98
HMGB3P7-201ENST00000400214 ATMINO43313 823 aaPredicted RBP8.9□□□□□ -0.98
HMGB3P7-201ENST00000400214 C7P10643 843 aa8.9□□□□□ -0.98
HMGB3P7-201ENST00000400214 WDR62O43379 1518 aa8.9□□□□□ -0.99
HMGB3P7-201ENST00000400214 MRC2Q9UBG0 1479 aa8.89□□□□□ -0.99
HMGB3P7-201ENST00000400214 CEP164Q9UPV0 1460 aa8.89□□□□□ -0.99
HMGB3P7-201ENST00000400214 MNX1P50219 401 aaPredicted RBP8.87□□□□□ -0.99
HMGB3P7-201ENST00000400214 MS4A3Q96HJ5 214 aa8.87□□□□□ -0.99
HMGB3P7-201ENST00000400214 BRPF1P55201 1214 aaPredicted RBP8.84□□□□□ -0.99
HMGB3P7-201ENST00000400214 SCUBE2Q9NQ36 999 aa8.83□□□□□ -1
HMGB3P7-201ENST00000400214 URB2Q14146 1524 aaKnown RBP8.83□□□□□ -1
HMGB3P7-201ENST00000400214 TTBK1Q5TCY1 1321 aaPredicted RBP8.82□□□□□ -1
HMGB3P7-201ENST00000400214 CHGAP10645 457 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms