RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 AEBP2Q6ZN18 517 aaPredicted RBP18.53■□□□□ 0.56
HMGB3P7-201ENST00000400214 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
HMGB3P7-201ENST00000400214 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
HMGB3P7-201ENST00000400214 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
HMGB3P7-201ENST00000400214 FOXD1Q16676 465 aa14.86□□□□□ -0.03
HMGB3P7-201ENST00000400214 POTEDQ86YR6 584 aa14.67□□□□□ -0.06
HMGB3P7-201ENST00000400214 MSH5O43196 834 aa14.11□□□□□ -0.15
HMGB3P7-201ENST00000400214 PIAS4Q8N2W9 510 aaPredicted RBP13.74□□□□□ -0.21
HMGB3P7-201ENST00000400214 PPP6R1Q9UPN7 881 aa13.48□□□□□ -0.25
HMGB3P7-201ENST00000400214 PLPPR3Q6T4P5 718 aa13.4□□□□□ -0.26
HMGB3P7-201ENST00000400214 ADRA2BP18089 450 aa13.38□□□□□ -0.27
HMGB3P7-201ENST00000400214 DMRT2Q9Y5R5 561 aa12.53□□□□□ -0.4
HMGB3P7-201ENST00000400214 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
HMGB3P7-201ENST00000400214 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
HMGB3P7-201ENST00000400214 SCAF1Q9H7N4 1312 aaKnown RBP12.23□□□□□ -0.45
HMGB3P7-201ENST00000400214 NISCHQ9Y2I1 1504 aa12.08□□□□□ -0.48
HMGB3P7-201ENST00000400214 RNF39Q9H2S5 420 aa12.01□□□□□ -0.49
HMGB3P7-201ENST00000400214 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
HMGB3P7-201ENST00000400214 HOXD11P31277 338 aaPredicted RBP11.87□□□□□ -0.51
HMGB3P7-201ENST00000400214 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
HMGB3P7-201ENST00000400214 EHMT2Q96KQ7 1210 aa11.81□□□□□ -0.52
HMGB3P7-201ENST00000400214 C1QBPQ07021 282 aaKnown RBP11.79□□□□□ -0.52
HMGB3P7-201ENST00000400214 PPP4R3CPQ6ZMV5 832 aa11.66□□□□□ -0.54
HMGB3P7-201ENST00000400214 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
HMGB3P7-201ENST00000400214 DNAJC5BQ9UF47 199 aa11.61□□□□□ -0.55
HMGB3P7-201ENST00000400214 CNKSR2Q8WXI2 1034 aa11.58□□□□□ -0.56
HMGB3P7-201ENST00000400214 POTEHQ6S545 545 aa11.38□□□□□ -0.59
HMGB3P7-201ENST00000400214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.61
HMGB3P7-201ENST00000400214 KCNA4P22459 653 aa11.2□□□□□ -0.62
HMGB3P7-201ENST00000400214 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
HMGB3P7-201ENST00000400214 DSG3P32926 999 aa11.06□□□□□ -0.64
HMGB3P7-201ENST00000400214 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
HMGB3P7-201ENST00000400214 NCBP3Q53F19 620 aaKnown RBP11.03□□□□□ -0.64
HMGB3P7-201ENST00000400214 U3KPZ7 1027 aaPredicted RBP11□□□□□ -0.65
HMGB3P7-201ENST00000400214 SPINK5Q9NQ38 1064 aaPredicted RBP10.97□□□□□ -0.65
HMGB3P7-201ENST00000400214 CAPN15O75808 1086 aa10.93□□□□□ -0.66
HMGB3P7-201ENST00000400214 NPM3O75607 178 aaKnown RBP10.92□□□□□ -0.66
HMGB3P7-201ENST00000400214 AMER1Q5JTC6 1135 aaPredicted RBP10.92□□□□□ -0.66
HMGB3P7-201ENST00000400214 SLC4A1APQ9BWU0 796 aaKnown RBP10.81□□□□□ -0.68
HMGB3P7-201ENST00000400214 CCDC180Q9P1Z9 1646 aa10.8□□□□□ -0.68
HMGB3P7-201ENST00000400214 ABCB7O75027 752 aa10.64□□□□□ -0.71
HMGB3P7-201ENST00000400214 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
HMGB3P7-201ENST00000400214 TRHP20396 242 aaPredicted RBP10.62□□□□□ -0.71
HMGB3P7-201ENST00000400214 APLP2Q06481 763 aa10.6□□□□□ -0.71
HMGB3P7-201ENST00000400214 SLC4A2P04920 1241 aa10.57□□□□□ -0.72
HMGB3P7-201ENST00000400214 RBM42Q9BTD8 480 aaKnown RBP10.55□□□□□ -0.72
HMGB3P7-201ENST00000400214 CHRDL2Q6WN34 429 aa10.52□□□□□ -0.73
HMGB3P7-201ENST00000400214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
HMGB3P7-201ENST00000400214 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
HMGB3P7-201ENST00000400214 ABCC9O60706 1549 aa10.43□□□□□ -0.74
HMGB3P7-201ENST00000400214 SP7Q8TDD2 431 aaPredicted RBP10.43□□□□□ -0.74
HMGB3P7-201ENST00000400214 SAMD1Q6SPF0 538 aaPredicted RBP10.39□□□□□ -0.75
HMGB3P7-201ENST00000400214 ZBTB22O15209 634 aa10.38□□□□□ -0.75
HMGB3P7-201ENST00000400214 PRKCSHP14314 528 aaPredicted RBP10.33□□□□□ -0.76
HMGB3P7-201ENST00000400214 DAXXQ9UER7 740 aaPredicted RBP10.3□□□□□ -0.76
HMGB3P7-201ENST00000400214 POLA2Q14181 598 aa10.24□□□□□ -0.77
HMGB3P7-201ENST00000400214 AKT1S1Q96B36 256 aa10.2□□□□□ -0.78
HMGB3P7-201ENST00000400214 PIP4P2Q8N4L2 257 aa10.17□□□□□ -0.78
HMGB3P7-201ENST00000400214 NACADO15069 1562 aa10.12□□□□□ -0.79
HMGB3P7-201ENST00000400214 RB1CC1Q8TDY2 1594 aa10.11□□□□□ -0.79
HMGB3P7-201ENST00000400214 MYCNP04198 464 aaPredicted RBP10.11□□□□□ -0.79
HMGB3P7-201ENST00000400214 TAOK2Q9UL54 1235 aa10.11□□□□□ -0.79
HMGB3P7-201ENST00000400214 MYO15BQ96JP2 1530 aa10.1□□□□□ -0.79
HMGB3P7-201ENST00000400214 REM2Q8IYK8 340 aaPredicted RBP10.09□□□□□ -0.79
HMGB3P7-201ENST00000400214 BCANQ96GW7 911 aa10.08□□□□□ -0.8
HMGB3P7-201ENST00000400214 ZCCHC6Q5VYS8 1495 aaKnown RBP10.06□□□□□ -0.8
HMGB3P7-201ENST00000400214 HAX1O00165 279 aa10.06□□□□□ -0.8
HMGB3P7-201ENST00000400214 PLCB2Q00722 1185 aa10.05□□□□□ -0.8
HMGB3P7-201ENST00000400214 DCAF1Q9Y4B6 1507 aa10.05□□□□□ -0.8
HMGB3P7-201ENST00000400214 FXR2P51116 673 aaKnown RBP eCLIP10.04□□□□□ -0.8
HMGB3P7-201ENST00000400214 ZBTB12Q9Y330 459 aaPredicted RBP10.03□□□□□ -0.8
HMGB3P7-201ENST00000400214 PITPNM1O00562 1244 aa10.01□□□□□ -0.81
HMGB3P7-201ENST00000400214 FKBP8Q14318 412 aa9.99□□□□□ -0.81
HMGB3P7-201ENST00000400214 OSCARQ8IYS5 282 aa9.97□□□□□ -0.81
HMGB3P7-201ENST00000400214 TIMELESSQ9UNS1 1208 aa9.97□□□□□ -0.81
HMGB3P7-201ENST00000400214 UNC13AQ9UPW8 1703 aa9.96□□□□□ -0.81
HMGB3P7-201ENST00000400214 ARXQ96QS3 562 aa9.96□□□□□ -0.82
HMGB3P7-201ENST00000400214 DCAF8L2P0C7V8 631 aa9.95□□□□□ -0.82
HMGB3P7-201ENST00000400214 EVX2Q03828 476 aa9.95□□□□□ -0.82
HMGB3P7-201ENST00000400214 TPRNQ4KMQ1 711 aa9.95□□□□□ -0.82
HMGB3P7-201ENST00000400214 HAP1P54257 671 aaPredicted RBP9.94□□□□□ -0.82
HMGB3P7-201ENST00000400214 FOXD4L1Q9NU39 408 aa9.93□□□□□ -0.82
HMGB3P7-201ENST00000400214 ATF5Q9Y2D1 282 aaPredicted RBP9.91□□□□□ -0.82
HMGB3P7-201ENST00000400214 TULP1O00294 542 aaPredicted RBP9.86□□□□□ -0.83
HMGB3P7-201ENST00000400214 BICRAQ9NZM4 1560 aa9.82□□□□□ -0.84
HMGB3P7-201ENST00000400214 SCRIBQ14160 1630 aa9.75□□□□□ -0.85
HMGB3P7-201ENST00000400214 SHROOM4Q9ULL8 1493 aa9.75□□□□□ -0.85
HMGB3P7-201ENST00000400214 VSIG10Q8N0Z9 540 aa9.75□□□□□ -0.85
HMGB3P7-201ENST00000400214 C19orf67A6NJJ6 358 aa9.74□□□□□ -0.85
HMGB3P7-201ENST00000400214 LHX8Q68G74 356 aa9.74□□□□□ -0.85
HMGB3P7-201ENST00000400214 PRKAR2AP13861 404 aaKnown RBP9.72□□□□□ -0.85
HMGB3P7-201ENST00000400214 PABPN1Q86U42 306 aaKnown RBP eCLIP9.72□□□□□ -0.85
HMGB3P7-201ENST00000400214 HOMEZQ8IX15 550 aa9.7□□□□□ -0.86
HMGB3P7-201ENST00000400214 GABBR2O75899 941 aa9.69□□□□□ -0.86
HMGB3P7-201ENST00000400214 SPDYE2BA6NHP3 402 aa9.68□□□□□ -0.86
HMGB3P7-201ENST00000400214 SPDYE6P0CI01 402 aa9.68□□□□□ -0.86
HMGB3P7-201ENST00000400214 SPDYE2Q495Y8 402 aa9.68□□□□□ -0.86
HMGB3P7-201ENST00000400214 GTF3C3Q9Y5Q9 886 aa9.67□□□□□ -0.86
HMGB3P7-201ENST00000400214 SPDYE1Q8NFV5 336 aaPredicted RBP9.61□□□□□ -0.87
HMGB3P7-201ENST00000400214 KDM2AQ9Y2K7 1162 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms