RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 MYH16Q9H6N6 1097 aa10.99□□□□□ -0.65
CHD8-201ENST00000399982 PLCB2Q00722 1185 aa10.97□□□□□ -0.65
CHD8-201ENST00000399982 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
CHD8-201ENST00000399982 PTMSP20962 102 aa10.96□□□□□ -0.65
CHD8-201ENST00000399982 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
CHD8-201ENST00000399982 CHAF1AQ13111 956 aaPredicted RBP10.93□□□□□ -0.66
CHD8-201ENST00000399982 GOLGA6L6A8MZA4 724 aa10.92□□□□□ -0.66
CHD8-201ENST00000399982 NPHP1O15259 732 aa10.92□□□□□ -0.66
CHD8-201ENST00000399982 NRDCO43847 1150 aa10.91□□□□□ -0.66
CHD8-201ENST00000399982 NOC3LQ8WTT2 800 aaKnown RBP10.91□□□□□ -0.66
CHD8-201ENST00000399982 FBXO3Q9UK99 471 aa10.9□□□□□ -0.66
CHD8-201ENST00000399982 DEKP35659 375 aaKnown RBP10.9□□□□□ -0.66
CHD8-201ENST00000399982 FBLN2P98095 1184 aa10.9□□□□□ -0.66
CHD8-201ENST00000399982 RSPH6AQ9H0K4 717 aa10.9□□□□□ -0.66
CHD8-201ENST00000399982 TMC1Q8TDI8 760 aa10.89□□□□□ -0.67
CHD8-201ENST00000399982 KRI1Q8N9T8 703 aaKnown RBP10.89□□□□□ -0.67
CHD8-201ENST00000399982 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
CHD8-201ENST00000399982 PDE4CQ08493 712 aa10.87□□□□□ -0.67
CHD8-201ENST00000399982 FAM9BQ8IZU0 186 aa10.87□□□□□ -0.67
CHD8-201ENST00000399982 MIER1Q8N108 512 aa10.87□□□□□ -0.67
CHD8-201ENST00000399982 RTN4Q9NQC3 1192 aaKnown RBP10.87□□□□□ -0.67
CHD8-201ENST00000399982 USP35Q9P2H5 1018 aa10.87□□□□□ -0.67
CHD8-201ENST00000399982 CFAP44Q96MT7 982 aa10.86□□□□□ -0.67
CHD8-201ENST00000399982 NAP1L2Q9ULW6 460 aaPredicted RBP10.86□□□□□ -0.67
CHD8-201ENST00000399982 MSNP26038 577 aaKnown RBP10.85□□□□□ -0.67
CHD8-201ENST00000399982 DDX10Q13206 875 aaKnown RBP10.85□□□□□ -0.67
CHD8-201ENST00000399982 MRS2Q9HD23 443 aa10.85□□□□□ -0.67
CHD8-201ENST00000399982 CALRP27797 417 aaKnown RBP10.85□□□□□ -0.67
CHD8-201ENST00000399982 CSRNP3Q8WYN3 585 aa10.83□□□□□ -0.68
CHD8-201ENST00000399982 HAP1P54257 671 aaPredicted RBP10.83□□□□□ -0.68
CHD8-201ENST00000399982 CHMP4BQ9H444 224 aaKnown RBP10.83□□□□□ -0.68
CHD8-201ENST00000399982 CASC1Q6TDU7 716 aa10.83□□□□□ -0.68
CHD8-201ENST00000399982 KIAA2012Q0VF49 1180 aa10.83□□□□□ -0.68
CHD8-201ENST00000399982 PNNQ9H307 717 aaKnown RBP10.83□□□□□ -0.68
CHD8-201ENST00000399982 WDR43Q15061 677 aaKnown RBP eCLIP10.82□□□□□ -0.687e-11■■□□□ 11.5
CHD8-201ENST00000399982 ISY1Q9ULR0 285 aaKnown RBP10.82□□□□□ -0.68
CHD8-201ENST00000399982 SUPT16HQ9Y5B9 1047 aaKnown RBP10.82□□□□□ -0.68
CHD8-201ENST00000399982 A0A0U1RQG5 324 aaPredicted RBP10.82□□□□□ -0.68
CHD8-201ENST00000399982 ARID3CA6NKF2 412 aa10.82□□□□□ -0.68
CHD8-201ENST00000399982 TNNT3P45378 269 aaPredicted RBP10.82□□□□□ -0.68
CHD8-201ENST00000399982 ANO8Q9HCE9 1232 aaPredicted RBP10.81□□□□□ -0.68
CHD8-201ENST00000399982 ZNF777Q9ULD5 760 aaPredicted RBP10.81□□□□□ -0.68
CHD8-201ENST00000399982 SENP3Q9H4L4 574 aaPredicted RBP10.8□□□□□ -0.68
CHD8-201ENST00000399982 DRC7Q8IY82 874 aa10.8□□□□□ -0.68
CHD8-201ENST00000399982 FGD1P98174 961 aa10.79□□□□□ -0.68
CHD8-201ENST00000399982 ARID3AQ99856 593 aa10.79□□□□□ -0.68
CHD8-201ENST00000399982 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
CHD8-201ENST00000399982 MS4A1P11836 297 aa10.78□□□□□ -0.68
CHD8-201ENST00000399982 CCER2I3L3R5 266 aa10.76□□□□□ -0.69
CHD8-201ENST00000399982 RBM19Q9Y4C8 960 aaKnown RBP10.76□□□□□ -0.69
CHD8-201ENST00000399982 EIF4G2P78344 907 aaKnown RBP eCLIP10.76□□□□□ -0.69
CHD8-201ENST00000399982 TIMELESSQ9UNS1 1208 aa10.76□□□□□ -0.69
CHD8-201ENST00000399982 EEA1Q15075 1411 aa10.74□□□□□ -0.69
CHD8-201ENST00000399982 IRX6P78412 446 aaPredicted RBP10.74□□□□□ -0.69
CHD8-201ENST00000399982 HSP90AA2PQ14568 343 aaPredicted RBP10.74□□□□□ -0.69
CHD8-201ENST00000399982 PATL2C9JE40 543 aaKnown RBP10.71□□□□□ -0.69
CHD8-201ENST00000399982 KCNJ4P48050 445 aa10.71□□□□□ -0.7
CHD8-201ENST00000399982 GOLGA6L4A6NEF3 574 aa10.7□□□□□ -0.7
CHD8-201ENST00000399982 GBP4Q96PP9 640 aa10.7□□□□□ -0.7
CHD8-201ENST00000399982 TCERG1O14776 1098 aaKnown RBP10.7□□□□□ -0.7
CHD8-201ENST00000399982 HSP90AB1P08238 724 aaKnown RBP10.69□□□□□ -0.7
CHD8-201ENST00000399982 HSCBQ8IWL3 235 aa10.69□□□□□ -0.7
CHD8-201ENST00000399982 OS9Q13438 667 aaPredicted RBP10.68□□□□□ -0.7
CHD8-201ENST00000399982 GOLGA6L1Q8N7Z2 621 aa10.68□□□□□ -0.7
CHD8-201ENST00000399982 LAS1LQ9Y4W2 734 aaKnown RBP10.68□□□□□ -0.7
CHD8-201ENST00000399982 CDCA8Q53HL2 280 aa10.68□□□□□ -0.7
CHD8-201ENST00000399982 GNL2Q13823 731 aaKnown RBP10.68□□□□□ -0.7
CHD8-201ENST00000399982 MTERF4Q7Z6M4 381 aaKnown RBP10.68□□□□□ -0.7
CHD8-201ENST00000399982 SYAP1Q96A49 352 aaPredicted RBP10.67□□□□□ -0.7
CHD8-201ENST00000399982 GOLGA6L3A6NEY3 463 aa10.66□□□□□ -0.7
CHD8-201ENST00000399982 MAP7D2Q96T17 732 aa10.66□□□□□ -0.7
CHD8-201ENST00000399982 IPO9Q96P70 1041 aaKnown RBP10.65□□□□□ -0.7
CHD8-201ENST00000399982 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.65□□□□□ -0.71e-6■■■□□ 19
CHD8-201ENST00000399982 SETQ01105 290 aaPredicted RBP10.65□□□□□ -0.7
CHD8-201ENST00000399982 FTSJ3Q8IY81 847 aaKnown RBP10.64□□□□□ -0.71
CHD8-201ENST00000399982 FANCIQ9NVI1 1328 aa10.63□□□□□ -0.71
CHD8-201ENST00000399982 WWC1Q8IX03 1113 aa10.63□□□□□ -0.71
CHD8-201ENST00000399982 P3H3Q8IVL6 736 aa10.63□□□□□ -0.71
CHD8-201ENST00000399982 CEP89Q96ST8 783 aa10.61□□□□□ -0.71
CHD8-201ENST00000399982 TSHZ2Q9NRE2 1034 aa10.61□□□□□ -0.71
CHD8-201ENST00000399982 TAF7LQ5H9L4 462 aa10.6□□□□□ -0.71
CHD8-201ENST00000399982 KDM2AQ9Y2K7 1162 aa10.6□□□□□ -0.71
CHD8-201ENST00000399982 CFAP53Q96M91 514 aa10.6□□□□□ -0.71
CHD8-201ENST00000399982 CREBRFQ8IUR6 639 aa10.59□□□□□ -0.71
CHD8-201ENST00000399982 LMOD2Q6P5Q4 547 aa10.59□□□□□ -0.71
CHD8-201ENST00000399982 MCCP23508 829 aa10.58□□□□□ -0.72
CHD8-201ENST00000399982 HTATSF1O43719 755 aaKnown RBP10.58□□□□□ -0.72
CHD8-201ENST00000399982 CNKSR2Q8WXI2 1034 aa10.58□□□□□ -0.72
CHD8-201ENST00000399982 PHF14O94880 888 aa10.58□□□□□ -0.72
CHD8-201ENST00000399982 VSIG10Q8N0Z9 540 aa10.58□□□□□ -0.72
CHD8-201ENST00000399982 DDX11L8A8MPP1 907 aa10.57□□□□□ -0.72
CHD8-201ENST00000399982 SPRYD3Q8NCJ5 442 aa10.57□□□□□ -0.72
CHD8-201ENST00000399982 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.57□□□□□ -0.72
CHD8-201ENST00000399982 SKOR2Q2VWA4 1001 aaPredicted RBP10.57□□□□□ -0.72
CHD8-201ENST00000399982 RSF1Q96T23 1441 aaPredicted RBP10.56□□□□□ -0.72
CHD8-201ENST00000399982 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
CHD8-201ENST00000399982 CLIP1P30622 1438 aa10.56□□□□□ -0.72
CHD8-201ENST00000399982 PPP1R15AO75807 674 aaPredicted RBP10.55□□□□□ -0.72
CHD8-201ENST00000399982 APPP05067 770 aa10.55□□□□□ -0.72
CHD8-201ENST00000399982 RRP12Q5JTH9 1297 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms