RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 EEA1Q15075 1411 aa15.14■□□□□ 0.01
ITSN1-207ENST00000399338 B4GALNT3Q6L9W6 998 aa15.13■□□□□ 0.01
ITSN1-207ENST00000399338 NEFMP07197 916 aa15.12■□□□□ 0.01
ITSN1-207ENST00000399338 ANP32CO43423 234 aa15.11■□□□□ 0.01
ITSN1-207ENST00000399338 ABCC8Q09428 1581 aa15.1■□□□□ 0.01
ITSN1-207ENST00000399338 FAM43AQ8N2R8 423 aa15.08■□□□□ 0.01
ITSN1-207ENST00000399338 MROH2BQ7Z745 1585 aa15.07■□□□□ 0
ITSN1-207ENST00000399338 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
ITSN1-207ENST00000399338 CCDC88BA6NC98 1476 aa15.06■□□□□ 0
ITSN1-207ENST00000399338 GSE1Q14687 1217 aa15.06■□□□□ 0
ITSN1-207ENST00000399338 CUX2O14529 1486 aa15.05■□□□□ 0
ITSN1-207ENST00000399338 HNRNPUQ00839 825 aaKnown RBP eCLIP15.04■□□□□ -0
ITSN1-207ENST00000399338 GOLGA3Q08378 1498 aa15.04■□□□□ -0
ITSN1-207ENST00000399338 CECR2Q9BXF3 1484 aa15.04■□□□□ -0
ITSN1-207ENST00000399338 UBTFP17480 764 aaKnown RBP15.04■□□□□ -0
ITSN1-207ENST00000399338 SOGA1O94964 1423 aa15.03■□□□□ -0
ITSN1-207ENST00000399338 VPS8Q8N3P4 1428 aa15.03■□□□□ -0
ITSN1-207ENST00000399338 CLIP1P30622 1438 aa15.03■□□□□ -0
ITSN1-207ENST00000399338 WDR97A6NE52 1622 aa15.02■□□□□ -0
ITSN1-207ENST00000399338 WIZO95785 1651 aa15.02□□□□□ -0.01
ITSN1-207ENST00000399338 PPM1GO15355 546 aaPredicted RBP15.01□□□□□ -0.01
ITSN1-207ENST00000399338 LAS1LQ9Y4W2 734 aaKnown RBP15.01□□□□□ -0.01
ITSN1-207ENST00000399338 NCAPD3P42695 1498 aa15□□□□□ -0.01
ITSN1-207ENST00000399338 MAPKBP1O60336 1514 aa14.99□□□□□ -0.01
ITSN1-207ENST00000399338 FRAT1Q92837 279 aaPredicted RBP14.95□□□□□ -0.02
ITSN1-207ENST00000399338 RRP9O43818 475 aaKnown RBP14.92□□□□□ -0.02
ITSN1-207ENST00000399338 RUSC2Q8N2Y8 1516 aa14.92□□□□□ -0.02
ITSN1-207ENST00000399338 CEP164Q9UPV0 1460 aa14.91□□□□□ -0.02
ITSN1-207ENST00000399338 AAMPQ13685 434 aa14.9□□□□□ -0.02
ITSN1-207ENST00000399338 FGD1P98174 961 aa14.9□□□□□ -0.02
ITSN1-207ENST00000399338 RBM10P98175 930 aaKnown RBP14.9□□□□□ -0.02
ITSN1-207ENST00000399338 HSP90AA2PQ14568 343 aaPredicted RBP14.9□□□□□ -0.02
ITSN1-207ENST00000399338 RRBP1Q9P2E9 1410 aaKnown RBP14.89□□□□□ -0.03
ITSN1-207ENST00000399338 DCAF11Q8TEB1 546 aa14.88□□□□□ -0.03
ITSN1-207ENST00000399338 TOP2AP11388 1531 aaKnown RBP14.88□□□□□ -0.03
ITSN1-207ENST00000399338 PEG3Q9GZU2 1588 aa14.88□□□□□ -0.03
ITSN1-207ENST00000399338 SMARCA2P51531 1590 aa14.87□□□□□ -0.03
ITSN1-207ENST00000399338 A0A0U1RQG5 324 aaPredicted RBP14.86□□□□□ -0.03
ITSN1-207ENST00000399338 NFKBIBQ15653 356 aa14.86□□□□□ -0.03
ITSN1-207ENST00000399338 SIN3AQ96ST3 1273 aa14.85□□□□□ -0.03
ITSN1-207ENST00000399338 HIRIP3Q9BW71 556 aaPredicted RBP14.85□□□□□ -0.03
ITSN1-207ENST00000399338 RRAGDQ9NQL2 400 aaPredicted RBP14.84□□□□□ -0.03
ITSN1-207ENST00000399338 KIF21BO75037 1637 aa14.83□□□□□ -0.03
ITSN1-207ENST00000399338 NPM2Q86SE8 214 aaKnown RBP14.83□□□□□ -0.04
ITSN1-207ENST00000399338 PDE4CQ08493 712 aa14.81□□□□□ -0.04
ITSN1-207ENST00000399338 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
ITSN1-207ENST00000399338 RNF123Q5XPI4 1314 aa14.8□□□□□ -0.04
ITSN1-207ENST00000399338 HSP90AA1P07900 732 aaKnown RBP14.79□□□□□ -0.04
ITSN1-207ENST00000399338 SMARCA4P51532 1647 aa14.79□□□□□ -0.04
ITSN1-207ENST00000399338 RAB3GAP2Q9H2M9 1393 aa14.79□□□□□ -0.04
ITSN1-207ENST00000399338 PDE4AP27815 886 aa14.76□□□□□ -0.05
ITSN1-207ENST00000399338 BACH2Q9BYV9 841 aa14.75□□□□□ -0.05
ITSN1-207ENST00000399338 BAZ1BQ9UIG0 1483 aaKnown RBP14.75□□□□□ -0.05
ITSN1-207ENST00000399338 TCERG1O14776 1098 aaKnown RBP14.75□□□□□ -0.05
ITSN1-207ENST00000399338 PRDM4Q9UKN5 801 aa14.74□□□□□ -0.05
ITSN1-207ENST00000399338 AKNAQ7Z591 1439 aa14.73□□□□□ -0.05
ITSN1-207ENST00000399338 SMG6Q86US8 1419 aaKnown RBP14.73□□□□□ -0.05
ITSN1-207ENST00000399338 DDRGK1Q96HY6 314 aa14.73□□□□□ -0.05
ITSN1-207ENST00000399338 NAP1L5Q96NT1 182 aaPredicted RBP14.72□□□□□ -0.05
ITSN1-207ENST00000399338 CCNB3Q8WWL7 1395 aa14.72□□□□□ -0.05
ITSN1-207ENST00000399338 CCDC184Q52MB2 194 aa14.71□□□□□ -0.05
ITSN1-207ENST00000399338 KANK4Q5T7N3 995 aaPredicted RBP14.7□□□□□ -0.06
ITSN1-207ENST00000399338 CENPJQ9HC77 1338 aaPredicted RBP14.7□□□□□ -0.06
ITSN1-207ENST00000399338 MS4A1P11836 297 aa14.69□□□□□ -0.06
ITSN1-207ENST00000399338 CALD1Q05682 793 aaKnown RBP14.69□□□□□ -0.06
ITSN1-207ENST00000399338 UNC13AQ9UPW8 1703 aa14.67□□□□□ -0.06
ITSN1-207ENST00000399338 PDIA4P13667 645 aaKnown RBP14.67□□□□□ -0.06
ITSN1-207ENST00000399338 PNNQ9H307 717 aaKnown RBP14.67□□□□□ -0.06
ITSN1-207ENST00000399338 CLCN1P35523 988 aa14.67□□□□□ -0.06
ITSN1-207ENST00000399338 SETD5Q9C0A6 1442 aa14.65□□□□□ -0.06
ITSN1-207ENST00000399338 FRAT2O75474 233 aaPredicted RBP14.64□□□□□ -0.07
ITSN1-207ENST00000399338 BCL11BQ9C0K0 894 aaPredicted RBP14.63□□□□□ -0.07
ITSN1-207ENST00000399338 FAM9BQ8IZU0 186 aa14.63□□□□□ -0.07
ITSN1-207ENST00000399338 NUDCQ9Y266 331 aa14.62□□□□□ -0.07
ITSN1-207ENST00000399338 PDCL3Q9H2J4 239 aa14.61□□□□□ -0.07
ITSN1-207ENST00000399338 NCOA2Q15596 1464 aa14.6□□□□□ -0.07
ITSN1-207ENST00000399338 ARAP1Q96P48 1450 aa14.59□□□□□ -0.07
ITSN1-207ENST00000399338 RAPGEF2Q9Y4G8 1499 aa14.59□□□□□ -0.07
ITSN1-207ENST00000399338 SLC4A3P48751 1232 aa14.59□□□□□ -0.07
ITSN1-207ENST00000399338 SYNJ1O43426 1573 aa14.58□□□□□ -0.08
ITSN1-207ENST00000399338 RGS3P49796 1198 aa14.58□□□□□ -0.08
ITSN1-207ENST00000399338 FHAD1B1AJZ9 1412 aa14.58□□□□□ -0.08
ITSN1-207ENST00000399338 L1TD1Q5T7N2 865 aaKnown RBP14.58□□□□□ -0.08
ITSN1-207ENST00000399338 PRKRIP1Q9H875 184 aaPredicted RBP14.57□□□□□ -0.08
ITSN1-207ENST00000399338 CNTLNQ9NXG0 1405 aa14.57□□□□□ -0.08
ITSN1-207ENST00000399338 MRS2Q9HD23 443 aa14.56□□□□□ -0.08
ITSN1-207ENST00000399338 POGKQ9P215 609 aa14.54□□□□□ -0.08
ITSN1-207ENST00000399338 TPM2P07951 284 aa14.51□□□□□ -0.09
ITSN1-207ENST00000399338 TONSLQ96HA7 1378 aa14.49□□□□□ -0.09
ITSN1-207ENST00000399338 EXOC6Q8TAG9 804 aa14.48□□□□□ -0.09
ITSN1-207ENST00000399338 KDM5BQ9UGL1 1544 aa14.48□□□□□ -0.09
ITSN1-207ENST00000399338 RANGAP1P46060 587 aaPredicted RBP14.48□□□□□ -0.09
ITSN1-207ENST00000399338 XRCC6P12956 609 aaKnown RBP eCLIP14.47□□□□□ -0.09
ITSN1-207ENST00000399338 TAF7LQ5H9L4 462 aa14.45□□□□□ -0.1
ITSN1-207ENST00000399338 BICRAQ9NZM4 1560 aa14.44□□□□□ -0.1
ITSN1-207ENST00000399338 FSD2A1L4K1 749 aa14.44□□□□□ -0.1
ITSN1-207ENST00000399338 RRP1P56182 461 aaKnown RBP14.44□□□□□ -0.1
ITSN1-207ENST00000399338 HSPA5P11021 654 aaKnown RBP14.44□□□□□ -0.1
ITSN1-207ENST00000399338 ERICH3Q5RHP9 1530 aa14.43□□□□□ -0.1
ITSN1-207ENST00000399338 GTF2E1P29083 439 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms