RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
ITSN1-207ENST00000399338 PELP1Q8IZL8 1130 aaKnown RBP19.39■□□□□ 0.69
ITSN1-207ENST00000399338 HRCP23327 699 aa19■□□□□ 0.63
ITSN1-207ENST00000399338 MYT1Q01538 1121 aa18.87■□□□□ 0.61
ITSN1-207ENST00000399338 PPARGC1BQ86YN6 1023 aaKnown RBP18.46■□□□□ 0.55
ITSN1-207ENST00000399338 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
ITSN1-207ENST00000399338 PCGF6Q9BYE7 350 aa18.14■□□□□ 0.49
ITSN1-207ENST00000399338 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
ITSN1-207ENST00000399338 MYO15BQ96JP2 1530 aa17.92■□□□□ 0.46
ITSN1-207ENST00000399338 ACIN1Q9UKV3 1341 aaKnown RBP17.67■□□□□ 0.42
ITSN1-207ENST00000399338 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
ITSN1-207ENST00000399338 ZEB1P37275 1124 aaPredicted RBP17.58■□□□□ 0.4
ITSN1-207ENST00000399338 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
ITSN1-207ENST00000399338 NEUROD1Q13562 356 aa17.56■□□□□ 0.4
ITSN1-207ENST00000399338 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
ITSN1-207ENST00000399338 BCL11AQ9H165 835 aa17.49■□□□□ 0.39
ITSN1-207ENST00000399338 TRIM26Q12899 539 aaPredicted RBP17.46■□□□□ 0.39
ITSN1-207ENST00000399338 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
ITSN1-207ENST00000399338 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
ITSN1-207ENST00000399338 PRKCSHP14314 528 aaPredicted RBP17.36■□□□□ 0.37
ITSN1-207ENST00000399338 FAM9AQ8IZU1 332 aaPredicted RBP17.34■□□□□ 0.37
ITSN1-207ENST00000399338 SUPT5HO00267 1087 aaKnown RBP17.31■□□□□ 0.36
ITSN1-207ENST00000399338 SHROOM4Q9ULL8 1493 aa17.11■□□□□ 0.33
ITSN1-207ENST00000399338 ANP32EQ9BTT0 268 aa17.05■□□□□ 0.32
ITSN1-207ENST00000399338 LOC105371045A0A1W2PR82 267 aa17.02■□□□□ 0.31
ITSN1-207ENST00000399338 ERICH6Q7L0X2 663 aa16.96■□□□□ 0.31
ITSN1-207ENST00000399338 DIEXFQ68CQ4 756 aaKnown RBP16.94■□□□□ 0.3
ITSN1-207ENST00000399338 APLP2Q06481 763 aa16.89■□□□□ 0.29
ITSN1-207ENST00000399338 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
ITSN1-207ENST00000399338 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
ITSN1-207ENST00000399338 TSHZ2Q9NRE2 1034 aa16.68■□□□□ 0.26
ITSN1-207ENST00000399338 YTHDC1Q96MU7 727 aaKnown RBP16.63■□□□□ 0.25
ITSN1-207ENST00000399338 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
ITSN1-207ENST00000399338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
ITSN1-207ENST00000399338 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
ITSN1-207ENST00000399338 SUPT16HQ9Y5B9 1047 aaKnown RBP16.54■□□□□ 0.24
ITSN1-207ENST00000399338 CCER1Q8TC90 406 aaPredicted RBP16.54■□□□□ 0.24
ITSN1-207ENST00000399338 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
ITSN1-207ENST00000399338 MIER1Q8N108 512 aa16.45■□□□□ 0.22
ITSN1-207ENST00000399338 ANO8Q9HCE9 1232 aaPredicted RBP16.3■□□□□ 0.2
ITSN1-207ENST00000399338 RBM19Q9Y4C8 960 aaKnown RBP16.19■□□□□ 0.18
ITSN1-207ENST00000399338 MSH5O43196 834 aa16.16■□□□□ 0.18
ITSN1-207ENST00000399338 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
ITSN1-207ENST00000399338 MYT1LQ9UL68 1186 aa16.1■□□□□ 0.17
ITSN1-207ENST00000399338 SALL2Q9Y467 1007 aaPredicted RBP16.05■□□□□ 0.16
ITSN1-207ENST00000399338 DEKP35659 375 aaKnown RBP16.03■□□□□ 0.16
ITSN1-207ENST00000399338 ERICH6BQ5W0A0 696 aa16.02■□□□□ 0.16
ITSN1-207ENST00000399338 FANCIQ9NVI1 1328 aa15.98■□□□□ 0.15
ITSN1-207ENST00000399338 BCANQ96GW7 911 aa15.95■□□□□ 0.14
ITSN1-207ENST00000399338 CCDC136Q96JN2 1154 aa15.91■□□□□ 0.14
ITSN1-207ENST00000399338 FKBP8Q14318 412 aa15.88■□□□□ 0.13
ITSN1-207ENST00000399338 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
ITSN1-207ENST00000399338 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
ITSN1-207ENST00000399338 EIF5BO60841 1220 aaKnown RBP15.81■□□□□ 0.12
ITSN1-207ENST00000399338 ITGAEP38570 1179 aa15.73■□□□□ 0.11
ITSN1-207ENST00000399338 SLC24A1O60721 1099 aa15.73■□□□□ 0.11
ITSN1-207ENST00000399338 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.7■□□□□ 0.1
ITSN1-207ENST00000399338 ABCC9O60706 1549 aa15.69■□□□□ 0.1
ITSN1-207ENST00000399338 NEFLP07196 543 aa15.68■□□□□ 0.1
ITSN1-207ENST00000399338 IL27Q8NEV9 243 aa15.68■□□□□ 0.1
ITSN1-207ENST00000399338 PKNOX2Q96KN3 472 aa15.68■□□□□ 0.1
ITSN1-207ENST00000399338 KCNH8Q96L42 1107 aa15.66■□□□□ 0.1
ITSN1-207ENST00000399338 DCAF8L2P0C7V8 631 aa15.6■□□□□ 0.09
ITSN1-207ENST00000399338 CDK11AQ9UQ88 783 aaPredicted RBP15.6■□□□□ 0.09
ITSN1-207ENST00000399338 RTN4Q9NQC3 1192 aaKnown RBP15.57■□□□□ 0.08
ITSN1-207ENST00000399338 NBR1Q14596 966 aa15.56■□□□□ 0.08
ITSN1-207ENST00000399338 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
ITSN1-207ENST00000399338 NOP58Q9Y2X3 529 aaKnown RBP15.54■□□□□ 0.08
ITSN1-207ENST00000399338 RB1CC1Q8TDY2 1594 aa15.52■□□□□ 0.08
ITSN1-207ENST00000399338 CEP162Q5TB80 1403 aa15.5■□□□□ 0.07
ITSN1-207ENST00000399338 PLEKHG5O94827 1062 aa15.48■□□□□ 0.07
ITSN1-207ENST00000399338 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
ITSN1-207ENST00000399338 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
ITSN1-207ENST00000399338 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
ITSN1-207ENST00000399338 C11orf95C9JLR9 678 aaPredicted RBP15.43■□□□□ 0.06
ITSN1-207ENST00000399338 RTL5Q5HYW3 569 aaPredicted RBP15.42■□□□□ 0.06
ITSN1-207ENST00000399338 PODXL2Q9NZ53 605 aa15.4■□□□□ 0.06
ITSN1-207ENST00000399338 WASHC2AQ641Q2 1341 aa15.4■□□□□ 0.06
ITSN1-207ENST00000399338 DHX57Q6P158 1386 aaKnown RBP15.38■□□□□ 0.05
ITSN1-207ENST00000399338 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
ITSN1-207ENST00000399338 TRIM52Q96A61 297 aa15.35■□□□□ 0.05
ITSN1-207ENST00000399338 SCRIBQ14160 1630 aa15.34■□□□□ 0.05
ITSN1-207ENST00000399338 WASHC2CQ9Y4E1 1318 aa15.34■□□□□ 0.05
ITSN1-207ENST00000399338 NACADO15069 1562 aa15.31■□□□□ 0.04
ITSN1-207ENST00000399338 CCER2I3L3R5 266 aa15.31■□□□□ 0.04
ITSN1-207ENST00000399338 IPO9Q96P70 1041 aaKnown RBP15.28■□□□□ 0.04
ITSN1-207ENST00000399338 PPP4R2Q9NY27 417 aa15.28■□□□□ 0.04
ITSN1-207ENST00000399338 RSPH6AQ9H0K4 717 aa15.27■□□□□ 0.03
ITSN1-207ENST00000399338 IRX6P78412 446 aaPredicted RBP15.26■□□□□ 0.03
ITSN1-207ENST00000399338 ZMYND15Q9H091 742 aa15.26■□□□□ 0.03
ITSN1-207ENST00000399338 GLIPR1L2Q4G1C9 344 aa15.23■□□□□ 0.03
ITSN1-207ENST00000399338 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
ITSN1-207ENST00000399338 BRPF3Q9ULD4 1205 aa15.22■□□□□ 0.03
ITSN1-207ENST00000399338 PPP1R15AO75807 674 aaPredicted RBP15.22■□□□□ 0.03
ITSN1-207ENST00000399338 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
ITSN1-207ENST00000399338 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
ITSN1-207ENST00000399338 DDX10Q13206 875 aaKnown RBP15.21■□□□□ 0.03
ITSN1-207ENST00000399338 ANP32AP39687 249 aaKnown RBP15.19■□□□□ 0.02
ITSN1-207ENST00000399338 EIF4G1Q04637 1599 aaKnown RBP15.16■□□□□ 0.02
ITSN1-207ENST00000399338 VSIG10Q8N0Z9 540 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms