RNA–Protein interactions for RNA: ENST00000398795.6

TNFSF11-203, Transcript of TNF superfamily member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF11, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-203ENST00000398795 CFAP43Q8NDM7 1665 aa28.5■■■□□ 2.15
TNFSF11-203ENST00000398795 ITGAEP38570 1179 aa28.48■■■□□ 2.15
TNFSF11-203ENST00000398795 PHLDB1Q86UU1 1377 aa28.48■■■□□ 2.15
TNFSF11-203ENST00000398795 ABCA10Q8WWZ4 1543 aa28.47■■■□□ 2.15
TNFSF11-203ENST00000398795 DNMBPQ6XZF7 1577 aa28.46■■■□□ 2.15
TNFSF11-203ENST00000398795 PCF11O94913 1555 aaKnown RBP28.44■■■□□ 2.14
TNFSF11-203ENST00000398795 EFCAB5A4FU69 1503 aa28.44■■■□□ 2.14
TNFSF11-203ENST00000398795 CC2D2AQ9P2K1 1620 aa28.44■■■□□ 2.14
TNFSF11-203ENST00000398795 AQRO60306 1485 aaKnown RBP eCLIP28.41■■■□□ 2.14
TNFSF11-203ENST00000398795 FYCO1Q9BQS8 1478 aa28.41■■■□□ 2.14
TNFSF11-203ENST00000398795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.39■■■□□ 2.13
TNFSF11-203ENST00000398795 POLA1P09884 1462 aaPredicted RBP28.36■■■□□ 2.13
TNFSF11-203ENST00000398795 CASKIN1Q8WXD9 1431 aa28.36■■■□□ 2.13
TNFSF11-203ENST00000398795 TOPBP1Q92547 1522 aa28.36■■■□□ 2.13
TNFSF11-203ENST00000398795 CUL7Q14999 1698 aa28.35■■■□□ 2.13
TNFSF11-203ENST00000398795 RAD54L2Q9Y4B4 1467 aa28.33■■■□□ 2.13
TNFSF11-203ENST00000398795 TIMELESSQ9UNS1 1208 aa28.32■■■□□ 2.12
TNFSF11-203ENST00000398795 FHOD3Q2V2M9 1422 aa28.31■■■□□ 2.12
TNFSF11-203ENST00000398795 FAM50AQ14320 339 aaKnown RBP28.3■■■□□ 2.12
TNFSF11-203ENST00000398795 P3H3Q8IVL6 736 aa28.25■■■□□ 2.11
TNFSF11-203ENST00000398795 FMN1Q68DA7 1419 aa28.24■■■□□ 2.11
TNFSF11-203ENST00000398795 MYT1Q01538 1121 aa28.23■■■□□ 2.11
TNFSF11-203ENST00000398795 CTTNBP2Q8WZ74 1663 aa28.22■■■□□ 2.11
TNFSF11-203ENST00000398795 WDR97A6NE52 1622 aa28.18■■■□□ 2.1
TNFSF11-203ENST00000398795 ATP1B4Q9UN42 357 aaPredicted RBP28.17■■■□□ 2.1
TNFSF11-203ENST00000398795 SNAPC4Q5SXM2 1469 aa28.16■■■□□ 2.1
TNFSF11-203ENST00000398795 FGD6Q6ZV73 1430 aa28.14■■■□□ 2.1
TNFSF11-203ENST00000398795 SIN3AQ96ST3 1273 aa28.14■■■□□ 2.09
TNFSF11-203ENST00000398795 SUPT16HQ9Y5B9 1047 aaKnown RBP28.14■■■□□ 2.09
TNFSF11-203ENST00000398795 NESP48681 1621 aa28.14■■■□□ 2.09
TNFSF11-203ENST00000398795 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
TNFSF11-203ENST00000398795 SAMD9Q5K651 1589 aa28.09■■■□□ 2.09
TNFSF11-203ENST00000398795 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.09
TNFSF11-203ENST00000398795 ABCA5Q8WWZ7 1642 aa28.07■■■□□ 2.08
TNFSF11-203ENST00000398795 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
TNFSF11-203ENST00000398795 PPP1R15AO75807 674 aaPredicted RBP28.04■■■□□ 2.08
TNFSF11-203ENST00000398795 HFM1A2PYH4 1435 aa28.04■■■□□ 2.08
TNFSF11-203ENST00000398795 MTUS2Q5JR59 1369 aa28.04■■■□□ 2.08
TNFSF11-203ENST00000398795 GRIN2BQ13224 1484 aa28■■■□□ 2.07
TNFSF11-203ENST00000398795 CCDC18Q5T9S5 1454 aa28■■■□□ 2.07
TNFSF11-203ENST00000398795 UACAQ9BZF9 1416 aa27.99■■■□□ 2.07
TNFSF11-203ENST00000398795 GAPVD1Q14C86 1478 aa27.99■■■□□ 2.07
TNFSF11-203ENST00000398795 DDX10Q13206 875 aaKnown RBP27.97■■■□□ 2.07
TNFSF11-203ENST00000398795 MYOM3Q5VTT5 1437 aa27.96■■■□□ 2.07
TNFSF11-203ENST00000398795 NCOA2Q15596 1464 aa27.95■■■□□ 2.06
TNFSF11-203ENST00000398795 TDRD9Q8NDG6 1382 aaKnown RBP27.95■■■□□ 2.06
TNFSF11-203ENST00000398795 KCNH8Q96L42 1107 aa27.94■■■□□ 2.06
TNFSF11-203ENST00000398795 PTPN23Q9H3S7 1636 aa27.94■■■□□ 2.06
TNFSF11-203ENST00000398795 PTPRKQ15262 1439 aa27.94■■■□□ 2.06
TNFSF11-203ENST00000398795 EHBP1L1Q8N3D4 1523 aa27.94■■■□□ 2.06
TNFSF11-203ENST00000398795 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
TNFSF11-203ENST00000398795 TONSLQ96HA7 1378 aa27.91■■■□□ 2.06
TNFSF11-203ENST00000398795 CCER2I3L3R5 266 aa27.9■■■□□ 2.06
TNFSF11-203ENST00000398795 NAIPQ13075 1403 aa27.89■■■□□ 2.06
TNFSF11-203ENST00000398795 SUPT6HQ7KZ85 1726 aaKnown RBP27.88■■■□□ 2.05
TNFSF11-203ENST00000398795 KIF21AQ7Z4S6 1674 aa27.88■■■□□ 2.05
TNFSF11-203ENST00000398795 LRRIQ1Q96JM4 1722 aa27.87■■■□□ 2.05
TNFSF11-203ENST00000398795 ARHGEF11O15085 1522 aa27.87■■■□□ 2.05
TNFSF11-203ENST00000398795 UGGT2Q9NYU1 1516 aa27.85■■■□□ 2.05
TNFSF11-203ENST00000398795 TCOF1Q13428 1488 aaKnown RBP27.79■■■□□ 2.04
TNFSF11-203ENST00000398795 ANP32CO43423 234 aa27.79■■■□□ 2.04
TNFSF11-203ENST00000398795 TARBP1Q13395 1621 aaKnown RBP27.76■■■□□ 2.03
TNFSF11-203ENST00000398795 AKNAQ7Z591 1439 aa27.76■■■□□ 2.03
TNFSF11-203ENST00000398795 MAGI3Q5TCQ9 1506 aa27.74■■■□□ 2.03
TNFSF11-203ENST00000398795 HECW1Q76N89 1606 aa27.73■■■□□ 2.03
TNFSF11-203ENST00000398795 HIRIP3Q9BW71 556 aaPredicted RBP27.72■■■□□ 2.03
TNFSF11-203ENST00000398795 KDM5BQ9UGL1 1544 aa27.72■■■□□ 2.03
TNFSF11-203ENST00000398795 TSHZ2Q9NRE2 1034 aa27.68■■■□□ 2.02
TNFSF11-203ENST00000398795 GCC2Q8IWJ2 1684 aa27.67■■■□□ 2.02
TNFSF11-203ENST00000398795 MIA2Q96PC5 1412 aa27.66■■■□□ 2.02
TNFSF11-203ENST00000398795 IQGAP2Q13576 1575 aa27.65■■■□□ 2.02
TNFSF11-203ENST00000398795 EPRSP07814 1512 aaKnown RBP27.64■■■□□ 2.02
TNFSF11-203ENST00000398795 ADAMTS12P58397 1594 aa27.6■■■□□ 2.01
TNFSF11-203ENST00000398795 PBRM1Q86U86 1689 aa27.6■■■□□ 2.01
TNFSF11-203ENST00000398795 FKBP8Q14318 412 aa27.59■■■□□ 2.01
TNFSF11-203ENST00000398795 DENND4BO75064 1496 aaPredicted RBP27.58■■■□□ 2.01
TNFSF11-203ENST00000398795 WDR62O43379 1518 aa27.57■■■□□ 2
TNFSF11-203ENST00000398795 RRP7BPQ9NSQ0 103 aa27.56■■■□□ 2
TNFSF11-203ENST00000398795 NEFLP07196 543 aa27.55■■■□□ 2
TNFSF11-203ENST00000398795 TRIM52Q96A61 297 aa27.51■■□□□ 1.99
TNFSF11-203ENST00000398795 CDK13Q14004 1512 aaKnown RBP27.5■■□□□ 1.99
TNFSF11-203ENST00000398795 CHIC2Q9UKJ5 165 aa27.49■■□□□ 1.99
TNFSF11-203ENST00000398795 ROCK1Q13464 1354 aa27.48■■□□□ 1.99
TNFSF11-203ENST00000398795 MRC2Q9UBG0 1479 aa27.47■■□□□ 1.99
TNFSF11-203ENST00000398795 DNAJC5BQ9UF47 199 aa27.47■■□□□ 1.99
TNFSF11-203ENST00000398795 KDM6BO15054 1643 aa27.46■■□□□ 1.99
TNFSF11-203ENST00000398795 BCANQ96GW7 911 aa27.46■■□□□ 1.99
TNFSF11-203ENST00000398795 MPHOSPH9Q99550 1183 aa27.46■■□□□ 1.99
TNFSF11-203ENST00000398795 HSPA5P11021 654 aaKnown RBP27.45■■□□□ 1.98
TNFSF11-203ENST00000398795 WASHC2AQ641Q2 1341 aa27.44■■□□□ 1.98
TNFSF11-203ENST00000398795 EIF4G2P78344 907 aaKnown RBP eCLIP27.42■■□□□ 1.98
TNFSF11-203ENST00000398795 DAPK1P53355 1430 aa27.4■■□□□ 1.98
TNFSF11-203ENST00000398795 KIAA0586Q9BVV6 1533 aa27.39■■□□□ 1.97
TNFSF11-203ENST00000398795 IFT140Q96RY7 1462 aa27.38■■□□□ 1.97
TNFSF11-203ENST00000398795 CNTLNQ9NXG0 1405 aa27.36■■□□□ 1.97
TNFSF11-203ENST00000398795 KIAA0556O60303 1618 aa27.35■■□□□ 1.97
TNFSF11-203ENST00000398795 DNMT1P26358 1616 aaKnown RBP27.35■■□□□ 1.97
TNFSF11-203ENST00000398795 RPRD2Q5VT52 1461 aaKnown RBP27.35■■□□□ 1.97
TNFSF11-203ENST00000398795 ANKRD30BQ9BXX2 1392 aa27.35■■□□□ 1.97
TNFSF11-203ENST00000398795 L3MBTL2Q969R5 705 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms