RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 DEKP35659 375 aaKnown RBP21.28■■□□□ 1
CYLD-202ENST00000398568 APLP2Q06481 763 aa21.26■□□□□ 0.99
CYLD-202ENST00000398568 WDR62O43379 1518 aa21.25■□□□□ 0.99
CYLD-202ENST00000398568 FBLN2P98095 1184 aa21.25■□□□□ 0.99
CYLD-202ENST00000398568 KCNH8Q96L42 1107 aa21.24■□□□□ 0.99
CYLD-202ENST00000398568 CUX2O14529 1486 aa21.23■□□□□ 0.99
CYLD-202ENST00000398568 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.99
CYLD-202ENST00000398568 ZNF608Q9ULD9 1512 aaPredicted RBP21.23■□□□□ 0.99
CYLD-202ENST00000398568 CDK11AQ9UQ88 783 aaPredicted RBP21.21■□□□□ 0.99
CYLD-202ENST00000398568 ANO8Q9HCE9 1232 aaPredicted RBP21.2■□□□□ 0.98
CYLD-202ENST00000398568 TOP2BQ02880 1626 aa21.19■□□□□ 0.98
CYLD-202ENST00000398568 RUSC2Q8N2Y8 1516 aa21.18■□□□□ 0.98
CYLD-202ENST00000398568 RANGAP1P46060 587 aaPredicted RBP21.11■□□□□ 0.97
CYLD-202ENST00000398568 DHX57Q6P158 1386 aaKnown RBP21.09■□□□□ 0.97
CYLD-202ENST00000398568 BIVM-ERCC5R4GMW8 1640 aa21.08■□□□□ 0.97
CYLD-202ENST00000398568 IFT140Q96RY7 1462 aa21.08■□□□□ 0.96
CYLD-202ENST00000398568 ERICH6BQ5W0A0 696 aa21.07■□□□□ 0.96
CYLD-202ENST00000398568 EEA1Q15075 1411 aa21.04■□□□□ 0.96
CYLD-202ENST00000398568 TRIM52Q96A61 297 aa21.03■□□□□ 0.96
CYLD-202ENST00000398568 GOLGA3Q08378 1498 aa21.02■□□□□ 0.96
CYLD-202ENST00000398568 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
CYLD-202ENST00000398568 GAPVD1Q14C86 1478 aa21■□□□□ 0.95
CYLD-202ENST00000398568 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
CYLD-202ENST00000398568 DDX10Q13206 875 aaKnown RBP20.98■□□□□ 0.95
CYLD-202ENST00000398568 CHMP7Q8WUX9 453 aaPredicted RBP20.98■□□□□ 0.95
CYLD-202ENST00000398568 SALL2Q9Y467 1007 aaPredicted RBP20.97■□□□□ 0.95
CYLD-202ENST00000398568 ABCA10Q8WWZ4 1543 aa20.97■□□□□ 0.95
CYLD-202ENST00000398568 NBR1Q14596 966 aa20.95■□□□□ 0.94
CYLD-202ENST00000398568 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
CYLD-202ENST00000398568 IGF1RP08069 1367 aa20.91■□□□□ 0.94
CYLD-202ENST00000398568 CLIP1P30622 1438 aa20.9■□□□□ 0.94
CYLD-202ENST00000398568 ANP32CO43423 234 aa20.9■□□□□ 0.94
CYLD-202ENST00000398568 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.93
CYLD-202ENST00000398568 CCER2I3L3R5 266 aa20.89■□□□□ 0.93
CYLD-202ENST00000398568 RTL5Q5HYW3 569 aaPredicted RBP20.89■□□□□ 0.93
CYLD-202ENST00000398568 VPS8Q8N3P4 1428 aa20.88■□□□□ 0.93
CYLD-202ENST00000398568 NOP58Q9Y2X3 529 aaKnown RBP20.88■□□□□ 0.93
CYLD-202ENST00000398568 CCDC136Q96JN2 1154 aa20.86■□□□□ 0.93
CYLD-202ENST00000398568 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
CYLD-202ENST00000398568 CARMIL1Q5VZK9 1371 aa20.84■□□□□ 0.93
CYLD-202ENST00000398568 IRX6P78412 446 aaPredicted RBP20.84■□□□□ 0.93
CYLD-202ENST00000398568 WDR97A6NE52 1622 aa20.79■□□□□ 0.92
CYLD-202ENST00000398568 UBE2Q2Q8WVN8 375 aa20.78■□□□□ 0.92
CYLD-202ENST00000398568 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
CYLD-202ENST00000398568 PPP4R2Q9NY27 417 aa20.77■□□□□ 0.91
CYLD-202ENST00000398568 RTN4Q9NQC3 1192 aaKnown RBP20.73■□□□□ 0.91
CYLD-202ENST00000398568 PPP1R15AO75807 674 aaPredicted RBP20.73■□□□□ 0.91
CYLD-202ENST00000398568 P3H3Q8IVL6 736 aa20.73■□□□□ 0.91
CYLD-202ENST00000398568 RAPGEF2Q9Y4G8 1499 aa20.72■□□□□ 0.91
CYLD-202ENST00000398568 OSCARQ8IYS5 282 aa20.72■□□□□ 0.91
CYLD-202ENST00000398568 PBRM1Q86U86 1689 aa20.72■□□□□ 0.91
CYLD-202ENST00000398568 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.71■□□□□ 0.91
CYLD-202ENST00000398568 HNRNPUQ00839 825 aaKnown RBP eCLIP20.7■□□□□ 0.9
CYLD-202ENST00000398568 IL27Q8NEV9 243 aa20.7■□□□□ 0.9
CYLD-202ENST00000398568 FHAD1B1AJZ9 1412 aa20.68■□□□□ 0.9
CYLD-202ENST00000398568 PAK3O75914 559 aaPredicted RBP20.68■□□□□ 0.9
CYLD-202ENST00000398568 ERICH3Q5RHP9 1530 aa20.66■□□□□ 0.9
CYLD-202ENST00000398568 ANP32AP39687 249 aaKnown RBP20.66■□□□□ 0.9
CYLD-202ENST00000398568 SYNJ2O15056 1496 aa20.65■□□□□ 0.9
CYLD-202ENST00000398568 MAGI1Q96QZ7 1491 aaPredicted RBP20.65■□□□□ 0.9
CYLD-202ENST00000398568 ZBTB47Q9UFB7 747 aaPredicted RBP20.62■□□□□ 0.89
CYLD-202ENST00000398568 GRIN2AQ12879 1464 aa20.61■□□□□ 0.89
CYLD-202ENST00000398568 ADAMTS12P58397 1594 aa20.6■□□□□ 0.89
CYLD-202ENST00000398568 B4GALNT3Q6L9W6 998 aa20.6■□□□□ 0.89
CYLD-202ENST00000398568 HIRIP3Q9BW71 556 aaPredicted RBP20.6■□□□□ 0.89
CYLD-202ENST00000398568 PRXQ9BXM0 1461 aa20.59■□□□□ 0.89
CYLD-202ENST00000398568 CHD1O14646 1710 aa20.59■□□□□ 0.89
CYLD-202ENST00000398568 KIF21BO75037 1637 aa20.57■□□□□ 0.88
CYLD-202ENST00000398568 IPO9Q96P70 1041 aaKnown RBP20.56■□□□□ 0.88
CYLD-202ENST00000398568 JPH4Q96JJ6 628 aa20.54■□□□□ 0.88
CYLD-202ENST00000398568 ARID3CA6NKF2 412 aa20.53■□□□□ 0.88
CYLD-202ENST00000398568 EIF5BO60841 1220 aaKnown RBP20.53■□□□□ 0.88
CYLD-202ENST00000398568 KANK4Q5T7N3 995 aaPredicted RBP20.52■□□□□ 0.88
CYLD-202ENST00000398568 ATP1B4Q9UN42 357 aaPredicted RBP20.52■□□□□ 0.88
CYLD-202ENST00000398568 RRBP1Q9P2E9 1410 aaKnown RBP20.51■□□□□ 0.87
CYLD-202ENST00000398568 CUL7Q14999 1698 aa20.5■□□□□ 0.87
CYLD-202ENST00000398568 CCNB3Q8WWL7 1395 aa20.5■□□□□ 0.87
CYLD-202ENST00000398568 SIN3AQ96ST3 1273 aa20.5■□□□□ 0.87
CYLD-202ENST00000398568 RAB3GAP2Q9H2M9 1393 aa20.49■□□□□ 0.87
CYLD-202ENST00000398568 TIMELESSQ9UNS1 1208 aa20.48■□□□□ 0.87
CYLD-202ENST00000398568 CEP170Q5SW79 1584 aa20.48■□□□□ 0.87
CYLD-202ENST00000398568 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
CYLD-202ENST00000398568 MAPKBP1O60336 1514 aa20.44■□□□□ 0.86
CYLD-202ENST00000398568 NUP160Q12769 1436 aa20.4■□□□□ 0.86
CYLD-202ENST00000398568 NEFMP07197 916 aa20.39■□□□□ 0.86
CYLD-202ENST00000398568 WASHC2AQ641Q2 1341 aa20.39■□□□□ 0.85
CYLD-202ENST00000398568 PRG4Q92954 1404 aaPredicted RBP20.39■□□□□ 0.85
CYLD-202ENST00000398568 USP35Q9P2H5 1018 aa20.39■□□□□ 0.85
CYLD-202ENST00000398568 KIAA0586Q9BVV6 1533 aa20.36■□□□□ 0.85
CYLD-202ENST00000398568 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
CYLD-202ENST00000398568 C11orf95C9JLR9 678 aaPredicted RBP20.35■□□□□ 0.85
CYLD-202ENST00000398568 ERCC6L2Q5T890 1561 aa20.35■□□□□ 0.85
CYLD-202ENST00000398568 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.85
CYLD-202ENST00000398568 FHOD3Q2V2M9 1422 aa20.32■□□□□ 0.84
CYLD-202ENST00000398568 LAS1LQ9Y4W2 734 aaKnown RBP20.31■□□□□ 0.84
CYLD-202ENST00000398568 IQGAP2Q13576 1575 aa20.31■□□□□ 0.84
CYLD-202ENST00000398568 PPM1GO15355 546 aaPredicted RBP20.29■□□□□ 0.84
CYLD-202ENST00000398568 NPM2Q86SE8 214 aaKnown RBP20.29■□□□□ 0.84
CYLD-202ENST00000398568 PKNOX2Q96KN3 472 aa20.29■□□□□ 0.84
CYLD-202ENST00000398568 WASHC2CQ9Y4E1 1318 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms