RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 NISCHQ9Y2I1 1504 aa29.51■■■□□ 2.31
CYLD-202ENST00000398568 CCDC180Q9P1Z9 1646 aa25.69■■□□□ 1.7
CYLD-202ENST00000398568 ABCC9O60706 1549 aa25.51■■□□□ 1.67
CYLD-202ENST00000398568 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
CYLD-202ENST00000398568 HRCP23327 699 aa25.4■■□□□ 1.66
CYLD-202ENST00000398568 PELP1Q8IZL8 1130 aaKnown RBP25.34■■□□□ 1.65
CYLD-202ENST00000398568 PPARGC1BQ86YN6 1023 aaKnown RBP24.76■■□□□ 1.55
CYLD-202ENST00000398568 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
CYLD-202ENST00000398568 ZCCHC6Q5VYS8 1495 aaKnown RBP24.6■■□□□ 1.53
CYLD-202ENST00000398568 MYT1Q01538 1121 aa24.57■■□□□ 1.52
CYLD-202ENST00000398568 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
CYLD-202ENST00000398568 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
CYLD-202ENST00000398568 RB1CC1Q8TDY2 1594 aa24.23■■□□□ 1.47
CYLD-202ENST00000398568 NACADO15069 1562 aa24.21■■□□□ 1.47
CYLD-202ENST00000398568 SCAF1Q9H7N4 1312 aaKnown RBP24.19■■□□□ 1.46
CYLD-202ENST00000398568 PABPN1Q86U42 306 aaKnown RBP eCLIP24.17■■□□□ 1.46
CYLD-202ENST00000398568 MYO15BQ96JP2 1530 aa24.09■■□□□ 1.45
CYLD-202ENST00000398568 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
CYLD-202ENST00000398568 SCRIBQ14160 1630 aa24.05■■□□□ 1.44
CYLD-202ENST00000398568 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
CYLD-202ENST00000398568 ZEB1P37275 1124 aaPredicted RBP23.91■■□□□ 1.42
CYLD-202ENST00000398568 TRIM26Q12899 539 aaPredicted RBP23.84■■□□□ 1.41
CYLD-202ENST00000398568 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
CYLD-202ENST00000398568 ACIN1Q9UKV3 1341 aaKnown RBP23.58■■□□□ 1.37
CYLD-202ENST00000398568 BICRAQ9NZM4 1560 aa23.53■■□□□ 1.36
CYLD-202ENST00000398568 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
CYLD-202ENST00000398568 NEUROD1Q13562 356 aa23.42■■□□□ 1.34
CYLD-202ENST00000398568 GTF3C3Q9Y5Q9 886 aa23.41■■□□□ 1.34
CYLD-202ENST00000398568 CENPBP07199 599 aaPredicted RBP23.4■■□□□ 1.34
CYLD-202ENST00000398568 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
CYLD-202ENST00000398568 DNAJC5BQ9UF47 199 aa23.18■■□□□ 1.3
CYLD-202ENST00000398568 TTBK1Q5TCY1 1321 aaPredicted RBP23.11■■□□□ 1.29
CYLD-202ENST00000398568 DIEXFQ68CQ4 756 aaKnown RBP22.99■■□□□ 1.27
CYLD-202ENST00000398568 EIF4G1Q04637 1599 aaKnown RBP22.94■■□□□ 1.26
CYLD-202ENST00000398568 MROH2BQ7Z745 1585 aa22.92■■□□□ 1.26
CYLD-202ENST00000398568 CCER1Q8TC90 406 aaPredicted RBP22.83■■□□□ 1.25
CYLD-202ENST00000398568 CC2D2AQ9P2K1 1620 aa22.8■■□□□ 1.24
CYLD-202ENST00000398568 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
CYLD-202ENST00000398568 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
CYLD-202ENST00000398568 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
CYLD-202ENST00000398568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.73■■□□□ 1.23
CYLD-202ENST00000398568 WIZO95785 1651 aa22.69■■□□□ 1.22
CYLD-202ENST00000398568 BCL11AQ9H165 835 aa22.69■■□□□ 1.22
CYLD-202ENST00000398568 YTHDC1Q96MU7 727 aaKnown RBP22.68■■□□□ 1.22
CYLD-202ENST00000398568 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
CYLD-202ENST00000398568 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
CYLD-202ENST00000398568 FAM9AQ8IZU1 332 aaPredicted RBP22.53■■□□□ 1.2
CYLD-202ENST00000398568 TRIM41Q8WV44 630 aa22.51■■□□□ 1.19
CYLD-202ENST00000398568 ANP32EQ9BTT0 268 aa22.49■■□□□ 1.19
CYLD-202ENST00000398568 SMARCA2P51531 1590 aa22.48■■□□□ 1.19
CYLD-202ENST00000398568 ZNF316A6NFI3 1004 aaPredicted RBP22.45■■□□□ 1.18
CYLD-202ENST00000398568 EHMT2Q96KQ7 1210 aa22.44■■□□□ 1.18
CYLD-202ENST00000398568 NCAPD3P42695 1498 aa22.44■■□□□ 1.18
CYLD-202ENST00000398568 PEG3Q9GZU2 1588 aa22.3■■□□□ 1.16
CYLD-202ENST00000398568 MIER1Q8N108 512 aa22.28■■□□□ 1.16
CYLD-202ENST00000398568 CLSPNQ9HAW4 1339 aa22.26■■□□□ 1.15
CYLD-202ENST00000398568 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
CYLD-202ENST00000398568 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
CYLD-202ENST00000398568 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
CYLD-202ENST00000398568 CSRNP3Q8WYN3 585 aa22.18■■□□□ 1.14
CYLD-202ENST00000398568 NESP48681 1621 aa22.17■■□□□ 1.14
CYLD-202ENST00000398568 TSHZ2Q9NRE2 1034 aa22.15■■□□□ 1.14
CYLD-202ENST00000398568 SUPT16HQ9Y5B9 1047 aaKnown RBP22.14■■□□□ 1.14
CYLD-202ENST00000398568 PRKCSHP14314 528 aaPredicted RBP22■■□□□ 1.11
CYLD-202ENST00000398568 CADPSQ9ULU8 1353 aa21.99■■□□□ 1.11
CYLD-202ENST00000398568 ERCC6Q03468 1493 aa21.89■■□□□ 1.1
CYLD-202ENST00000398568 CFTRP13569 1480 aa21.82■■□□□ 1.08
CYLD-202ENST00000398568 ERICH6Q7L0X2 663 aa21.79■■□□□ 1.08
CYLD-202ENST00000398568 FANCD2Q9BXW9 1451 aa21.76■■□□□ 1.07
CYLD-202ENST00000398568 PDS5BQ9NTI5 1447 aa21.75■■□□□ 1.07
CYLD-202ENST00000398568 LAMC3Q9Y6N6 1575 aa21.72■■□□□ 1.07
CYLD-202ENST00000398568 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
CYLD-202ENST00000398568 BCANQ96GW7 911 aa21.69■■□□□ 1.06
CYLD-202ENST00000398568 WRNQ14191 1432 aaPredicted RBP eCLIP21.68■■□□□ 1.06
CYLD-202ENST00000398568 CEP164Q9UPV0 1460 aa21.65■■□□□ 1.06
CYLD-202ENST00000398568 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
CYLD-202ENST00000398568 RBM19Q9Y4C8 960 aaKnown RBP21.64■■□□□ 1.05
CYLD-202ENST00000398568 HNRNPUL2Q1KMD3 747 aaKnown RBP21.62■■□□□ 1.05
CYLD-202ENST00000398568 FKBP8Q14318 412 aa21.56■■□□□ 1.04
CYLD-202ENST00000398568 NEFLP07196 543 aa21.53■■□□□ 1.04
CYLD-202ENST00000398568 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
CYLD-202ENST00000398568 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
CYLD-202ENST00000398568 MRC2Q9UBG0 1479 aa21.46■■□□□ 1.03
CYLD-202ENST00000398568 MYT1LQ9UL68 1186 aa21.45■■□□□ 1.02
CYLD-202ENST00000398568 CUX1P39880 1505 aa21.42■■□□□ 1.02
CYLD-202ENST00000398568 TOPBP1Q92547 1522 aa21.4■■□□□ 1.02
CYLD-202ENST00000398568 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
CYLD-202ENST00000398568 SYNJ1O43426 1573 aa21.38■■□□□ 1.01
CYLD-202ENST00000398568 MSH5O43196 834 aa21.37■■□□□ 1.01
CYLD-202ENST00000398568 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
CYLD-202ENST00000398568 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
CYLD-202ENST00000398568 TNIKQ9UKE5 1360 aa21.35■■□□□ 1.01
CYLD-202ENST00000398568 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
CYLD-202ENST00000398568 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
CYLD-202ENST00000398568 THOC2Q8NI27 1593 aaKnown RBP21.33■■□□□ 1.01
CYLD-202ENST00000398568 ITGAEP38570 1179 aa21.32■■□□□ 1
CYLD-202ENST00000398568 SOGA1O94964 1423 aa21.31■■□□□ 1
CYLD-202ENST00000398568 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
CYLD-202ENST00000398568 DNMBPQ6XZF7 1577 aa21.28■■□□□ 1
CYLD-202ENST00000398568 FANCIQ9NVI1 1328 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms