RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 SHROOM2Q13796 1616 aa11.23□□□□□ -0.61
SMARCE1P6-201ENST00000398372 GRIN2AQ12879 1464 aa11.22□□□□□ -0.61
SMARCE1P6-201ENST00000398372 ABCC10Q5T3U5 1492 aa11.22□□□□□ -0.61
SMARCE1P6-201ENST00000398372 EHMT2Q96KQ7 1210 aa11.22□□□□□ -0.61
SMARCE1P6-201ENST00000398372 KDM6BO15054 1643 aa11.21□□□□□ -0.61
SMARCE1P6-201ENST00000398372 ABCA5Q8WWZ7 1642 aa11.2□□□□□ -0.62
SMARCE1P6-201ENST00000398372 NUP160Q12769 1436 aa11.2□□□□□ -0.62
SMARCE1P6-201ENST00000398372 TSPOAP1O95153 1857 aa11.19□□□□□ -0.62
SMARCE1P6-201ENST00000398372 DIP2BQ9P265 1576 aa11.18□□□□□ -0.62
SMARCE1P6-201ENST00000398372 ABCA10Q8WWZ4 1543 aa11.16□□□□□ -0.62
SMARCE1P6-201ENST00000398372 PRG4Q92954 1404 aaPredicted RBP11.16□□□□□ -0.62
SMARCE1P6-201ENST00000398372 HECW2Q9P2P5 1572 aa11.16□□□□□ -0.62
SMARCE1P6-201ENST00000398372 ADAMTS12P58397 1594 aa11.15□□□□□ -0.62
SMARCE1P6-201ENST00000398372 ADGRL1O94910 1474 aa11.14□□□□□ -0.63
SMARCE1P6-201ENST00000398372 MAPKBP1O60336 1514 aa11.14□□□□□ -0.63
SMARCE1P6-201ENST00000398372 ADCY10Q96PN6 1610 aa11.13□□□□□ -0.63
SMARCE1P6-201ENST00000398372 JPH4Q96JJ6 628 aa11.12□□□□□ -0.63
SMARCE1P6-201ENST00000398372 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMARCE1P6-201ENST00000398372 FBXO41Q8TF61 875 aa11.09□□□□□ -0.63
SMARCE1P6-201ENST00000398372 FHAD1B1AJZ9 1412 aa11.09□□□□□ -0.63
SMARCE1P6-201ENST00000398372 KCNA4P22459 653 aa11.07□□□□□ -0.64
SMARCE1P6-201ENST00000398372 PPRC1Q5VV67 1664 aaKnown RBP11.05□□□□□ -0.64
SMARCE1P6-201ENST00000398372 COL17A1Q9UMD9 1497 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1P6-201ENST00000398372 RUSC2Q8N2Y8 1516 aa11□□□□□ -0.65
SMARCE1P6-201ENST00000398372 WRNQ14191 1432 aaPredicted RBP eCLIP11□□□□□ -0.65
SMARCE1P6-201ENST00000398372 ERICH3Q5RHP9 1530 aa10.99□□□□□ -0.65
SMARCE1P6-201ENST00000398372 BIVM-ERCC5R4GMW8 1640 aa10.98□□□□□ -0.65
SMARCE1P6-201ENST00000398372 TOP2BQ02880 1626 aa10.97□□□□□ -0.65
SMARCE1P6-201ENST00000398372 TTBK1Q5TCY1 1321 aaPredicted RBP10.95□□□□□ -0.66
SMARCE1P6-201ENST00000398372 ASXL2Q76L83 1435 aa10.94□□□□□ -0.66
SMARCE1P6-201ENST00000398372 GLI2P10070 1586 aa10.94□□□□□ -0.66
SMARCE1P6-201ENST00000398372 LMTK3Q96Q04 1460 aa10.93□□□□□ -0.66
SMARCE1P6-201ENST00000398372 ILDR2Q71H61 639 aa10.93□□□□□ -0.66
SMARCE1P6-201ENST00000398372 PTPRGP23470 1445 aa10.9□□□□□ -0.66
SMARCE1P6-201ENST00000398372 ABCC2Q92887 1545 aa10.89□□□□□ -0.67
SMARCE1P6-201ENST00000398372 CUL7Q14999 1698 aa10.89□□□□□ -0.67
SMARCE1P6-201ENST00000398372 MAP3K4Q9Y6R4 1608 aa10.89□□□□□ -0.67
SMARCE1P6-201ENST00000398372 KIAA0586Q9BVV6 1533 aa10.89□□□□□ -0.67
SMARCE1P6-201ENST00000398372 PLB1Q6P1J6 1458 aa10.88□□□□□ -0.67
SMARCE1P6-201ENST00000398372 EPRSP07814 1512 aaKnown RBP10.86□□□□□ -0.67
SMARCE1P6-201ENST00000398372 SOCS7O14512 581 aa10.86□□□□□ -0.67
SMARCE1P6-201ENST00000398372 PELP1Q8IZL8 1130 aaKnown RBP10.85□□□□□ -0.67
SMARCE1P6-201ENST00000398372 CACNB1Q02641 598 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1P6-201ENST00000398372 SLC4A1APQ9BWU0 796 aaKnown RBP10.84□□□□□ -0.67
SMARCE1P6-201ENST00000398372 KIF21BO75037 1637 aa10.83□□□□□ -0.68
SMARCE1P6-201ENST00000398372 TNIKQ9UKE5 1360 aa10.82□□□□□ -0.68
SMARCE1P6-201ENST00000398372 UHRF1BP1LA0JNW5 1464 aa10.81□□□□□ -0.68
SMARCE1P6-201ENST00000398372 TEX14Q8IWB6 1497 aa10.81□□□□□ -0.68
SMARCE1P6-201ENST00000398372 NCBP3Q53F19 620 aaKnown RBP10.81□□□□□ -0.68
SMARCE1P6-201ENST00000398372 IGF1RP08069 1367 aa10.8□□□□□ -0.68
SMARCE1P6-201ENST00000398372 MYT1Q01538 1121 aa10.8□□□□□ -0.68
SMARCE1P6-201ENST00000398372 DISP3Q9P2K9 1392 aa10.79□□□□□ -0.68
SMARCE1P6-201ENST00000398372 UACAQ9BZF9 1416 aa10.79□□□□□ -0.68
SMARCE1P6-201ENST00000398372 ZCCHC11Q5TAX3 1644 aaKnown RBP10.78□□□□□ -0.68
SMARCE1P6-201ENST00000398372 DMRT2Q9Y5R5 561 aa10.78□□□□□ -0.68
SMARCE1P6-201ENST00000398372 PTPRMP28827 1452 aa10.78□□□□□ -0.68
SMARCE1P6-201ENST00000398372 KDM5BQ9UGL1 1544 aa10.78□□□□□ -0.68
SMARCE1P6-201ENST00000398372 KIF27Q86VH2 1401 aa10.76□□□□□ -0.69
SMARCE1P6-201ENST00000398372 ADAMTSL3P82987 1691 aa10.76□□□□□ -0.69
SMARCE1P6-201ENST00000398372 MAPK8IP2Q13387 824 aaPredicted RBP10.76□□□□□ -0.69
SMARCE1P6-201ENST00000398372 CERKQ8TCT0 537 aa10.75□□□□□ -0.69
SMARCE1P6-201ENST00000398372 CARMIL2Q6F5E8 1435 aa10.75□□□□□ -0.69
SMARCE1P6-201ENST00000398372 DISP1Q96F81 1524 aa10.74□□□□□ -0.69
SMARCE1P6-201ENST00000398372 PCF11O94913 1555 aaKnown RBP10.73□□□□□ -0.69
SMARCE1P6-201ENST00000398372 HSPA2P54652 639 aa10.73□□□□□ -0.69
SMARCE1P6-201ENST00000398372 CD109Q6YHK3 1445 aa10.73□□□□□ -0.69
SMARCE1P6-201ENST00000398372 KCNH8Q96L42 1107 aa10.72□□□□□ -0.69
SMARCE1P6-201ENST00000398372 MAGI3Q5TCQ9 1506 aa10.72□□□□□ -0.69
SMARCE1P6-201ENST00000398372 WDR7Q9Y4E6 1490 aa10.71□□□□□ -0.69
SMARCE1P6-201ENST00000398372 CSRNP3Q8WYN3 585 aa10.7□□□□□ -0.7
SMARCE1P6-201ENST00000398372 IQGAP2Q13576 1575 aa10.69□□□□□ -0.7
SMARCE1P6-201ENST00000398372 MADDQ8WXG6 1647 aa10.69□□□□□ -0.7
SMARCE1P6-201ENST00000398372 CARMIL1Q5VZK9 1371 aa10.68□□□□□ -0.7
SMARCE1P6-201ENST00000398372 CFAP43Q8NDM7 1665 aa10.68□□□□□ -0.7
SMARCE1P6-201ENST00000398372 BCORL1Q5H9F3 1711 aa10.67□□□□□ -0.7
SMARCE1P6-201ENST00000398372 RAPGEF3O95398 923 aa10.66□□□□□ -0.7
SMARCE1P6-201ENST00000398372 ARAP3Q8WWN8 1544 aa10.66□□□□□ -0.7
SMARCE1P6-201ENST00000398372 PPP4R3CPQ6ZMV5 832 aa10.64□□□□□ -0.71
SMARCE1P6-201ENST00000398372 SPATA31D1Q6ZQQ2 1576 aa10.64□□□□□ -0.71
SMARCE1P6-201ENST00000398372 RIMS1Q86UR5 1692 aaKnown RBP10.63□□□□□ -0.71
SMARCE1P6-201ENST00000398372 ARID4BQ4LE39 1312 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1P6-201ENST00000398372 UGGT2Q9NYU1 1516 aa10.62□□□□□ -0.71
SMARCE1P6-201ENST00000398372 KIAA0556O60303 1618 aa10.62□□□□□ -0.71
SMARCE1P6-201ENST00000398372 RAPGEF2Q9Y4G8 1499 aa10.59□□□□□ -0.71
SMARCE1P6-201ENST00000398372 FRMPD1Q5SYB0 1578 aa10.59□□□□□ -0.71
SMARCE1P6-201ENST00000398372 ABCA8O94911 1581 aa10.58□□□□□ -0.72
SMARCE1P6-201ENST00000398372 ARID3CA6NKF2 412 aa10.58□□□□□ -0.72
SMARCE1P6-201ENST00000398372 SIGLEC1Q9BZZ2 1709 aa10.57□□□□□ -0.72
SMARCE1P6-201ENST00000398372 STRCQ7RTU9 1775 aa10.54□□□□□ -0.72
SMARCE1P6-201ENST00000398372 ABCA9Q8IUA7 1624 aa10.52□□□□□ -0.73
SMARCE1P6-201ENST00000398372 SCAF1Q9H7N4 1312 aaKnown RBP10.52□□□□□ -0.73
SMARCE1P6-201ENST00000398372 PHLDB1Q86UU1 1377 aa10.52□□□□□ -0.73
SMARCE1P6-201ENST00000398372 CTTNBP2Q8WZ74 1663 aa10.51□□□□□ -0.73
SMARCE1P6-201ENST00000398372 ATP10BO94823 1461 aa10.51□□□□□ -0.73
SMARCE1P6-201ENST00000398372 PRXQ9BXM0 1461 aa10.5□□□□□ -0.73
SMARCE1P6-201ENST00000398372 MLECQ14165 292 aa10.5□□□□□ -0.73
SMARCE1P6-201ENST00000398372 NEO1Q92859 1461 aa10.49□□□□□ -0.73
SMARCE1P6-201ENST00000398372 ARHGEF40Q8TER5 1519 aa10.49□□□□□ -0.73
SMARCE1P6-201ENST00000398372 CEBPAP49715 358 aaPredicted RBP10.49□□□□□ -0.73
SMARCE1P6-201ENST00000398372 YEATS2Q9ULM3 1422 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms