RNA–Protein interactions for RNA: ENST00000398238.8

NSF-201, Transcript of N-ethylmaleimide sensitive factor, vesicle fusing ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSF, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSF-201ENST00000398238 PHLDB1Q86UU1 1377 aa20.32■□□□□ 0.84
NSF-201ENST00000398238 FHOD3Q2V2M9 1422 aa20.31■□□□□ 0.84
NSF-201ENST00000398238 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
NSF-201ENST00000398238 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
NSF-201ENST00000398238 TDRD9Q8NDG6 1382 aaKnown RBP20.26■□□□□ 0.83
NSF-201ENST00000398238 TIAM1Q13009 1591 aa20.25■□□□□ 0.83
NSF-201ENST00000398238 PCF11O94913 1555 aaKnown RBP20.24■□□□□ 0.83
NSF-201ENST00000398238 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
NSF-201ENST00000398238 RAB3GAP2Q9H2M9 1393 aa20.23■□□□□ 0.83
NSF-201ENST00000398238 FAM50AQ14320 339 aaKnown RBP20.22■□□□□ 0.83
NSF-201ENST00000398238 LRRC9Q6ZRR7 1453 aa20.21■□□□□ 0.83
NSF-201ENST00000398238 SIN3AQ96ST3 1273 aa20.2■□□□□ 0.82
NSF-201ENST00000398238 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
NSF-201ENST00000398238 THOC2Q8NI27 1593 aaKnown RBP20.18■□□□□ 0.82
NSF-201ENST00000398238 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
NSF-201ENST00000398238 MAPKBP1O60336 1514 aa20.16■□□□□ 0.82
NSF-201ENST00000398238 KCNH8Q96L42 1107 aa20.14■□□□□ 0.81
NSF-201ENST00000398238 CENPBP07199 599 aaPredicted RBP20.13■□□□□ 0.81
NSF-201ENST00000398238 HIRIP3Q9BW71 556 aaPredicted RBP20.12■□□□□ 0.81
NSF-201ENST00000398238 ARID3CA6NKF2 412 aa20.07■□□□□ 0.8
NSF-201ENST00000398238 LRRIQ1Q96JM4 1722 aa20.06■□□□□ 0.8
NSF-201ENST00000398238 WDR62O43379 1518 aa20.05■□□□□ 0.8
NSF-201ENST00000398238 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
NSF-201ENST00000398238 CFAP43Q8NDM7 1665 aa20.03■□□□□ 0.8
NSF-201ENST00000398238 PTPRKQ15262 1439 aa20.02■□□□□ 0.8
NSF-201ENST00000398238 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.8
NSF-201ENST00000398238 CLSPNQ9HAW4 1339 aa20.02■□□□□ 0.79
NSF-201ENST00000398238 MAP3K1Q13233 1512 aa20■□□□□ 0.79
NSF-201ENST00000398238 FHAD1B1AJZ9 1412 aa20■□□□□ 0.79
NSF-201ENST00000398238 CTTNBP2Q8WZ74 1663 aa19.99■□□□□ 0.79
NSF-201ENST00000398238 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
NSF-201ENST00000398238 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
NSF-201ENST00000398238 ABCA5Q8WWZ7 1642 aa19.97■□□□□ 0.79
NSF-201ENST00000398238 CASKIN1Q8WXD9 1431 aa19.97■□□□□ 0.79
NSF-201ENST00000398238 AQRO60306 1485 aaKnown RBP eCLIP19.96■□□□□ 0.79
NSF-201ENST00000398238 FYCO1Q9BQS8 1478 aa19.94■□□□□ 0.78
NSF-201ENST00000398238 CUL7Q14999 1698 aa19.93■□□□□ 0.78
NSF-201ENST00000398238 MAGI3Q5TCQ9 1506 aa19.92■□□□□ 0.78
NSF-201ENST00000398238 PDS5BQ9NTI5 1447 aa19.89■□□□□ 0.77
NSF-201ENST00000398238 FGD6Q6ZV73 1430 aa19.87■□□□□ 0.77
NSF-201ENST00000398238 DDX10Q13206 875 aaKnown RBP19.87■□□□□ 0.77
NSF-201ENST00000398238 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
NSF-201ENST00000398238 EFCAB5A4FU69 1503 aa19.87■□□□□ 0.77
NSF-201ENST00000398238 MTUS2Q5JR59 1369 aa19.87■□□□□ 0.77
NSF-201ENST00000398238 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
NSF-201ENST00000398238 SAMD9Q5K651 1589 aa19.86■□□□□ 0.77
NSF-201ENST00000398238 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
NSF-201ENST00000398238 GRIN2BQ13224 1484 aa19.83■□□□□ 0.77
NSF-201ENST00000398238 NCOA2Q15596 1464 aa19.82■□□□□ 0.76
NSF-201ENST00000398238 FMN1Q68DA7 1419 aa19.82■□□□□ 0.76
NSF-201ENST00000398238 RRP7BPQ9NSQ0 103 aa19.82■□□□□ 0.76
NSF-201ENST00000398238 PBRM1Q86U86 1689 aa19.81■□□□□ 0.76
NSF-201ENST00000398238 CDK13Q14004 1512 aaKnown RBP19.78■□□□□ 0.76
NSF-201ENST00000398238 KDM6BO15054 1643 aa19.76■□□□□ 0.75
NSF-201ENST00000398238 FOXD1Q16676 465 aa19.76■□□□□ 0.75
NSF-201ENST00000398238 CCDC18Q5T9S5 1454 aa19.75■□□□□ 0.75
NSF-201ENST00000398238 PPP1R15AO75807 674 aaPredicted RBP19.75■□□□□ 0.75
NSF-201ENST00000398238 NAIPQ13075 1403 aa19.74■□□□□ 0.75
NSF-201ENST00000398238 MYOM3Q5VTT5 1437 aa19.71■□□□□ 0.75
NSF-201ENST00000398238 DENND4BO75064 1496 aaPredicted RBP19.71■□□□□ 0.75
NSF-201ENST00000398238 PTPN23Q9H3S7 1636 aa19.71■□□□□ 0.75
NSF-201ENST00000398238 ZNF644Q9H582 1327 aaPredicted RBP19.71■□□□□ 0.75
NSF-201ENST00000398238 HFM1A2PYH4 1435 aa19.68■□□□□ 0.74
NSF-201ENST00000398238 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
NSF-201ENST00000398238 UGGT2Q9NYU1 1516 aa19.66■□□□□ 0.74
NSF-201ENST00000398238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.65■□□□□ 0.74
NSF-201ENST00000398238 SUPT16HQ9Y5B9 1047 aaKnown RBP19.65■□□□□ 0.74
NSF-201ENST00000398238 ADAMTS12P58397 1594 aa19.65■□□□□ 0.74
NSF-201ENST00000398238 KDM5BQ9UGL1 1544 aa19.64■□□□□ 0.73
NSF-201ENST00000398238 EPRSP07814 1512 aaKnown RBP19.64■□□□□ 0.73
NSF-201ENST00000398238 SUPT6HQ7KZ85 1726 aaKnown RBP19.63■□□□□ 0.73
NSF-201ENST00000398238 IQGAP2Q13576 1575 aa19.63■□□□□ 0.73
NSF-201ENST00000398238 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
NSF-201ENST00000398238 UACAQ9BZF9 1416 aa19.6■□□□□ 0.73
NSF-201ENST00000398238 EHBP1L1Q8N3D4 1523 aa19.59■□□□□ 0.73
NSF-201ENST00000398238 TRIM52Q96A61 297 aa19.59■□□□□ 0.73
NSF-201ENST00000398238 TONSLQ96HA7 1378 aa19.58■□□□□ 0.73
NSF-201ENST00000398238 FBLN2P98095 1184 aa19.57■□□□□ 0.72
NSF-201ENST00000398238 DISP1Q96F81 1524 aa19.57■□□□□ 0.72
NSF-201ENST00000398238 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
NSF-201ENST00000398238 PELP1Q8IZL8 1130 aaKnown RBP19.55■□□□□ 0.72
NSF-201ENST00000398238 BCANQ96GW7 911 aa19.55■□□□□ 0.72
NSF-201ENST00000398238 C11orf95C9JLR9 678 aaPredicted RBP19.51■□□□□ 0.71
NSF-201ENST00000398238 NUP153P49790 1475 aaKnown RBP19.51■□□□□ 0.71
NSF-201ENST00000398238 HECW1Q76N89 1606 aa19.5■□□□□ 0.71
NSF-201ENST00000398238 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
NSF-201ENST00000398238 MPHOSPH9Q99550 1183 aa19.49■□□□□ 0.71
NSF-201ENST00000398238 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
NSF-201ENST00000398238 TCOF1Q13428 1488 aaKnown RBP19.48■□□□□ 0.71
NSF-201ENST00000398238 PLB1Q6P1J6 1458 aa19.48■□□□□ 0.71
NSF-201ENST00000398238 CCDC184Q52MB2 194 aa19.46■□□□□ 0.71
NSF-201ENST00000398238 L3MBTL2Q969R5 705 aa19.46■□□□□ 0.71
NSF-201ENST00000398238 KIAA0556O60303 1618 aa19.45■□□□□ 0.7
NSF-201ENST00000398238 WASHC2AQ641Q2 1341 aa19.45■□□□□ 0.7
NSF-201ENST00000398238 HSPA5P11021 654 aaKnown RBP19.44■□□□□ 0.7
NSF-201ENST00000398238 NBPF8Q3BBV2 869 aa19.44■□□□□ 0.7
NSF-201ENST00000398238 TIMELESSQ9UNS1 1208 aa19.44■□□□□ 0.7
NSF-201ENST00000398238 GRIN2AQ12879 1464 aa19.44■□□□□ 0.7
NSF-201ENST00000398238 ZNF777Q9ULD5 760 aaPredicted RBP19.43■□□□□ 0.7
NSF-201ENST00000398238 ABCC5O15440 1437 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms