RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ATP1B4Q9UN42 357 aaPredicted RBP27.07■■□□□ 1.92
CHRFAM7A-202ENST00000397827 ACIN1Q9UKV3 1341 aaKnown RBP27.06■■□□□ 1.92
CHRFAM7A-202ENST00000397827 NEUROD1Q13562 356 aa27.04■■□□□ 1.92
CHRFAM7A-202ENST00000397827 MAP3K1Q13233 1512 aa27.04■■□□□ 1.92
CHRFAM7A-202ENST00000397827 FHAD1B1AJZ9 1412 aa27.03■■□□□ 1.92
CHRFAM7A-202ENST00000397827 CLSPNQ9HAW4 1339 aa27.03■■□□□ 1.92
CHRFAM7A-202ENST00000397827 FHOD3Q2V2M9 1422 aa27.03■■□□□ 1.92
CHRFAM7A-202ENST00000397827 LRRC9Q6ZRR7 1453 aa27.03■■□□□ 1.92
CHRFAM7A-202ENST00000397827 PCF11O94913 1555 aaKnown RBP27■■□□□ 1.91
CHRFAM7A-202ENST00000397827 TDRD9Q8NDG6 1382 aaKnown RBP26.99■■□□□ 1.91
CHRFAM7A-202ENST00000397827 CUL7Q14999 1698 aa26.99■■□□□ 1.91
CHRFAM7A-202ENST00000397827 PHLDB1Q86UU1 1377 aa26.96■■□□□ 1.91
CHRFAM7A-202ENST00000397827 WDR97A6NE52 1622 aa26.94■■□□□ 1.9
CHRFAM7A-202ENST00000397827 PDS5BQ9NTI5 1447 aa26.94■■□□□ 1.9
CHRFAM7A-202ENST00000397827 CTTNBP2Q8WZ74 1663 aa26.91■■□□□ 1.9
CHRFAM7A-202ENST00000397827 GTF3C3Q9Y5Q9 886 aa26.91■■□□□ 1.9
CHRFAM7A-202ENST00000397827 CFAP43Q8NDM7 1665 aa26.9■■□□□ 1.9
CHRFAM7A-202ENST00000397827 MIER1Q8N108 512 aa26.9■■□□□ 1.9
CHRFAM7A-202ENST00000397827 CENPBP07199 599 aaPredicted RBP26.9■■□□□ 1.9
CHRFAM7A-202ENST00000397827 EFCAB5A4FU69 1503 aa26.89■■□□□ 1.9
CHRFAM7A-202ENST00000397827 FAM50AQ14320 339 aaKnown RBP26.89■■□□□ 1.89
CHRFAM7A-202ENST00000397827 RAB3GAP2Q9H2M9 1393 aa26.88■■□□□ 1.89
CHRFAM7A-202ENST00000397827 GAPVD1Q14C86 1478 aa26.87■■□□□ 1.89
CHRFAM7A-202ENST00000397827 KIF21AQ7Z4S6 1674 aa26.87■■□□□ 1.89
CHRFAM7A-202ENST00000397827 ABCA5Q8WWZ7 1642 aa26.86■■□□□ 1.89
CHRFAM7A-202ENST00000397827 FYCO1Q9BQS8 1478 aa26.85■■□□□ 1.89
CHRFAM7A-202ENST00000397827 CASKIN1Q8WXD9 1431 aa26.84■■□□□ 1.89
CHRFAM7A-202ENST00000397827 YTHDC1Q96MU7 727 aaKnown RBP26.82■■□□□ 1.88
CHRFAM7A-202ENST00000397827 AQRO60306 1485 aaKnown RBP eCLIP26.78■■□□□ 1.88
CHRFAM7A-202ENST00000397827 SETD5Q9C0A6 1442 aa26.77■■□□□ 1.88
CHRFAM7A-202ENST00000397827 FMN1Q68DA7 1419 aa26.77■■□□□ 1.88
CHRFAM7A-202ENST00000397827 SNAPC4Q5SXM2 1469 aa26.72■■□□□ 1.87
CHRFAM7A-202ENST00000397827 MAPKBP1O60336 1514 aa26.72■■□□□ 1.87
CHRFAM7A-202ENST00000397827 TARBP1Q13395 1621 aaKnown RBP26.71■■□□□ 1.87
CHRFAM7A-202ENST00000397827 SAMD9Q5K651 1589 aa26.68■■□□□ 1.86
CHRFAM7A-202ENST00000397827 MTUS2Q5JR59 1369 aa26.64■■□□□ 1.86
CHRFAM7A-202ENST00000397827 LRRIQ1Q96JM4 1722 aa26.61■■□□□ 1.85
CHRFAM7A-202ENST00000397827 FGD6Q6ZV73 1430 aa26.59■■□□□ 1.85
CHRFAM7A-202ENST00000397827 SIN3AQ96ST3 1273 aa26.59■■□□□ 1.85
CHRFAM7A-202ENST00000397827 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
CHRFAM7A-202ENST00000397827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.56■■□□□ 1.84
CHRFAM7A-202ENST00000397827 PBRM1Q86U86 1689 aa26.56■■□□□ 1.84
CHRFAM7A-202ENST00000397827 MRC2Q9UBG0 1479 aa26.53■■□□□ 1.84
CHRFAM7A-202ENST00000397827 NCOA2Q15596 1464 aa26.5■■□□□ 1.83
CHRFAM7A-202ENST00000397827 PTPRKQ15262 1439 aa26.47■■□□□ 1.83
CHRFAM7A-202ENST00000397827 ADAMTS12P58397 1594 aa26.46■■□□□ 1.83
CHRFAM7A-202ENST00000397827 THOC2Q8NI27 1593 aaKnown RBP26.45■■□□□ 1.83
CHRFAM7A-202ENST00000397827 MYOM3Q5VTT5 1437 aa26.45■■□□□ 1.82
CHRFAM7A-202ENST00000397827 IQGAP2Q13576 1575 aa26.44■■□□□ 1.82
CHRFAM7A-202ENST00000397827 ZNF608Q9ULD9 1512 aaPredicted RBP26.43■■□□□ 1.82
CHRFAM7A-202ENST00000397827 MAGI3Q5TCQ9 1506 aa26.42■■□□□ 1.82
CHRFAM7A-202ENST00000397827 SUPT6HQ7KZ85 1726 aaKnown RBP26.42■■□□□ 1.82
CHRFAM7A-202ENST00000397827 EHBP1L1Q8N3D4 1523 aa26.42■■□□□ 1.82
CHRFAM7A-202ENST00000397827 ARID3CA6NKF2 412 aa26.4■■□□□ 1.82
CHRFAM7A-202ENST00000397827 CCDC18Q5T9S5 1454 aa26.38■■□□□ 1.81
CHRFAM7A-202ENST00000397827 HFM1A2PYH4 1435 aa26.36■■□□□ 1.81
CHRFAM7A-202ENST00000397827 UGGT2Q9NYU1 1516 aa26.36■■□□□ 1.81
CHRFAM7A-202ENST00000397827 IFT140Q96RY7 1462 aa26.34■■□□□ 1.81
CHRFAM7A-202ENST00000397827 HECW1Q76N89 1606 aa26.33■■□□□ 1.81
CHRFAM7A-202ENST00000397827 PTPN23Q9H3S7 1636 aa26.33■■□□□ 1.81
CHRFAM7A-202ENST00000397827 EPRSP07814 1512 aaKnown RBP26.32■■□□□ 1.8
CHRFAM7A-202ENST00000397827 ARHGEF11O15085 1522 aa26.31■■□□□ 1.8
CHRFAM7A-202ENST00000397827 CDK13Q14004 1512 aaKnown RBP26.31■■□□□ 1.8
CHRFAM7A-202ENST00000397827 NAIPQ13075 1403 aa26.31■■□□□ 1.8
CHRFAM7A-202ENST00000397827 WDR62O43379 1518 aa26.31■■□□□ 1.8
CHRFAM7A-202ENST00000397827 TIMELESSQ9UNS1 1208 aa26.3■■□□□ 1.8
CHRFAM7A-202ENST00000397827 UACAQ9BZF9 1416 aa26.28■■□□□ 1.8
CHRFAM7A-202ENST00000397827 PPP1R15AO75807 674 aaPredicted RBP26.28■■□□□ 1.8
CHRFAM7A-202ENST00000397827 BCL11AQ9H165 835 aa26.28■■□□□ 1.8
CHRFAM7A-202ENST00000397827 CHIC2Q9UKJ5 165 aa26.28■■□□□ 1.8
CHRFAM7A-202ENST00000397827 RRP7BPQ9NSQ0 103 aa26.26■■□□□ 1.79
CHRFAM7A-202ENST00000397827 HIRIP3Q9BW71 556 aaPredicted RBP26.25■■□□□ 1.79
CHRFAM7A-202ENST00000397827 DDX10Q13206 875 aaKnown RBP26.21■■□□□ 1.79
CHRFAM7A-202ENST00000397827 KIAA0586Q9BVV6 1533 aa26.2■■□□□ 1.79
CHRFAM7A-202ENST00000397827 TONSLQ96HA7 1378 aa26.2■■□□□ 1.79
CHRFAM7A-202ENST00000397827 EIF4G3O43432 1585 aaKnown RBP26.19■■□□□ 1.78
CHRFAM7A-202ENST00000397827 ERCC6Q03468 1493 aa26.19■■□□□ 1.78
CHRFAM7A-202ENST00000397827 TCOF1Q13428 1488 aaKnown RBP26.18■■□□□ 1.78
CHRFAM7A-202ENST00000397827 DISP1Q96F81 1524 aa26.18■■□□□ 1.78
CHRFAM7A-202ENST00000397827 KCNH8Q96L42 1107 aa26.17■■□□□ 1.78
CHRFAM7A-202ENST00000397827 GRIN2AQ12879 1464 aa26.16■■□□□ 1.78
CHRFAM7A-202ENST00000397827 KIAA0556O60303 1618 aa26.15■■□□□ 1.78
CHRFAM7A-202ENST00000397827 MIA2Q96PC5 1412 aa26.11■■□□□ 1.77
CHRFAM7A-202ENST00000397827 TRIM52Q96A61 297 aa26.1■■□□□ 1.77
CHRFAM7A-202ENST00000397827 FBLN2P98095 1184 aa26.09■■□□□ 1.77
CHRFAM7A-202ENST00000397827 NUP153P49790 1475 aaKnown RBP26.09■■□□□ 1.77
CHRFAM7A-202ENST00000397827 CHMP7Q8WUX9 453 aaPredicted RBP26.08■■□□□ 1.77
CHRFAM7A-202ENST00000397827 KDM6BO15054 1643 aa26.07■■□□□ 1.76
CHRFAM7A-202ENST00000397827 GCC2Q8IWJ2 1684 aa26.06■■□□□ 1.76
CHRFAM7A-202ENST00000397827 RAPGEF6Q8TEU7 1601 aa26.04■■□□□ 1.76
CHRFAM7A-202ENST00000397827 ZNF644Q9H582 1327 aaPredicted RBP26.03■■□□□ 1.76
CHRFAM7A-202ENST00000397827 DENND4BO75064 1496 aaPredicted RBP26.03■■□□□ 1.76
CHRFAM7A-202ENST00000397827 AKNAQ7Z591 1439 aa26.01■■□□□ 1.75
CHRFAM7A-202ENST00000397827 MAGI1Q96QZ7 1491 aaPredicted RBP26.01■■□□□ 1.75
CHRFAM7A-202ENST00000397827 CEP170Q5SW79 1584 aa26■■□□□ 1.75
CHRFAM7A-202ENST00000397827 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
CHRFAM7A-202ENST00000397827 CDK11AQ9UQ88 783 aaPredicted RBP25.98■■□□□ 1.75
CHRFAM7A-202ENST00000397827 KDM5BQ9UGL1 1544 aa25.98■■□□□ 1.75
CHRFAM7A-202ENST00000397827 MPHOSPH9Q99550 1183 aa25.97■■□□□ 1.75
CHRFAM7A-202ENST00000397827 DAPK1P53355 1430 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms