RNA–Protein interactions for RNA: ENST00000397118.7

JPH4-202, Transcript of junctophilin 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene JPH4, Length 4,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JPH4-202ENST00000397118 RAPGEF2Q9Y4G8 1499 aa22.07■■□□□ 1.12
JPH4-202ENST00000397118 ANP32AP39687 249 aaKnown RBP22.06■■□□□ 1.12
JPH4-202ENST00000397118 CARMIL1Q5VZK9 1371 aa22.05■■□□□ 1.12
JPH4-202ENST00000397118 SALL2Q9Y467 1007 aaPredicted RBP22.05■■□□□ 1.12
JPH4-202ENST00000397118 CUX2O14529 1486 aa22.05■■□□□ 1.12
JPH4-202ENST00000397118 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
JPH4-202ENST00000397118 SMARCA4P51532 1647 aa22.02■■□□□ 1.12
JPH4-202ENST00000397118 TMC1Q8TDI8 760 aa22.02■■□□□ 1.12
JPH4-202ENST00000397118 NPM2Q86SE8 214 aaKnown RBP22.01■■□□□ 1.11
JPH4-202ENST00000397118 CCDC136Q96JN2 1154 aa21.98■■□□□ 1.11
JPH4-202ENST00000397118 RAB3GAP2Q9H2M9 1393 aa21.98■■□□□ 1.11
JPH4-202ENST00000397118 KDM2AQ9Y2K7 1162 aa21.97■■□□□ 1.11
JPH4-202ENST00000397118 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
JPH4-202ENST00000397118 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
JPH4-202ENST00000397118 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
JPH4-202ENST00000397118 SENP3-EIF4A1A0A087X0R7 540 aa21.93■■□□□ 1.1
JPH4-202ENST00000397118 DHX57Q6P158 1386 aaKnown RBP21.92■■□□□ 1.1
JPH4-202ENST00000397118 TIMELESSQ9UNS1 1208 aa21.91■■□□□ 1.1
JPH4-202ENST00000397118 ANP32EQ9BTT0 268 aa21.9■■□□□ 1.1
JPH4-202ENST00000397118 TSPY4P0CV99 314 aa21.88■■□□□ 1.09
JPH4-202ENST00000397118 TSPY10P0CW01 314 aa21.88■■□□□ 1.09
JPH4-202ENST00000397118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.86■■□□□ 1.09
JPH4-202ENST00000397118 NBR1Q14596 966 aa21.83■■□□□ 1.08
JPH4-202ENST00000397118 CANXP27824 592 aaKnown RBP21.82■■□□□ 1.08
JPH4-202ENST00000397118 KCNH8Q96L42 1107 aa21.82■■□□□ 1.08
JPH4-202ENST00000397118 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
JPH4-202ENST00000397118 CCER2I3L3R5 266 aa21.81■■□□□ 1.08
JPH4-202ENST00000397118 PPP1R15AO75807 674 aaPredicted RBP21.79■■□□□ 1.08
JPH4-202ENST00000397118 ARHGAP35Q9NRY4 1499 aa21.77■■□□□ 1.08
JPH4-202ENST00000397118 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.08
JPH4-202ENST00000397118 CFDP1Q9UEE9 299 aaPredicted RBP21.76■■□□□ 1.07
JPH4-202ENST00000397118 ZBTB47Q9UFB7 747 aaPredicted RBP21.75■■□□□ 1.07
JPH4-202ENST00000397118 BCL11AQ9H165 835 aa21.75■■□□□ 1.07
JPH4-202ENST00000397118 TSHZ2Q9NRE2 1034 aa21.73■■□□□ 1.07
JPH4-202ENST00000397118 HSPA5P11021 654 aaKnown RBP21.72■■□□□ 1.07
JPH4-202ENST00000397118 NPM1P06748 294 aaKnown RBP eCLIP21.71■■□□□ 1.07
JPH4-202ENST00000397118 TDRD9Q8NDG6 1382 aaKnown RBP21.71■■□□□ 1.07
JPH4-202ENST00000397118 PPP4R2Q9NY27 417 aa21.7■■□□□ 1.06
JPH4-202ENST00000397118 RGL3Q3MIN7 710 aa21.7■■□□□ 1.06
JPH4-202ENST00000397118 FOXD1Q16676 465 aa21.69■■□□□ 1.06
JPH4-202ENST00000397118 RBM19Q9Y4C8 960 aaKnown RBP21.69■■□□□ 1.06
JPH4-202ENST00000397118 B4GALNT3Q6L9W6 998 aa21.69■■□□□ 1.06
JPH4-202ENST00000397118 PLEKHD1A6NEE1 506 aa21.68■■□□□ 1.06
JPH4-202ENST00000397118 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
JPH4-202ENST00000397118 FHOD3Q2V2M9 1422 aa21.67■■□□□ 1.06
JPH4-202ENST00000397118 CARD11Q9BXL7 1154 aa21.66■■□□□ 1.06
JPH4-202ENST00000397118 CHGAP10645 457 aaKnown RBP21.63■■□□□ 1.05
JPH4-202ENST00000397118 KIF21BO75037 1637 aa21.63■■□□□ 1.05
JPH4-202ENST00000397118 WDR43Q15061 677 aaKnown RBP eCLIP21.61■■□□□ 1.05
JPH4-202ENST00000397118 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
JPH4-202ENST00000397118 EIF5BO60841 1220 aaKnown RBP21.6■■□□□ 1.05
JPH4-202ENST00000397118 FMN1Q68DA7 1419 aa21.59■■□□□ 1.05
JPH4-202ENST00000397118 MPHOSPH9Q99550 1183 aa21.56■■□□□ 1.04
JPH4-202ENST00000397118 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
JPH4-202ENST00000397118 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.52■■□□□ 1.04
JPH4-202ENST00000397118 L3MBTL2Q969R5 705 aa21.52■■□□□ 1.04
JPH4-202ENST00000397118 IGF1RP08069 1367 aa21.51■■□□□ 1.03
JPH4-202ENST00000397118 NCAPD3P42695 1498 aa21.48■■□□□ 1.03
JPH4-202ENST00000397118 DCAF11Q8TEB1 546 aa21.47■■□□□ 1.03
JPH4-202ENST00000397118 ARAP1Q96P48 1450 aa21.47■■□□□ 1.03
JPH4-202ENST00000397118 FANCD2Q9BXW9 1451 aa21.46■■□□□ 1.03
JPH4-202ENST00000397118 NEFMP07197 916 aa21.46■■□□□ 1.03
JPH4-202ENST00000397118 PKD2Q13563 968 aa21.45■■□□□ 1.02
JPH4-202ENST00000397118 PHLDB1Q86UU1 1377 aa21.43■■□□□ 1.02
JPH4-202ENST00000397118 NOP58Q9Y2X3 529 aaKnown RBP21.4■■□□□ 1.02
JPH4-202ENST00000397118 CC2D1BQ5T0F9 858 aaKnown RBP21.4■■□□□ 1.02
JPH4-202ENST00000397118 UPF2Q9HAU5 1272 aaKnown RBP21.39■■□□□ 1.02
JPH4-202ENST00000397118 KNSTRNQ9Y448 316 aa21.39■■□□□ 1.01
JPH4-202ENST00000397118 ERICH6BQ5W0A0 696 aa21.36■■□□□ 1.01
JPH4-202ENST00000397118 RRBP1Q9P2E9 1410 aaKnown RBP21.36■■□□□ 1.01
JPH4-202ENST00000397118 ESF1Q9H501 851 aaKnown RBP21.34■■□□□ 1.01
JPH4-202ENST00000397118 CCDC18Q5T9S5 1454 aa21.34■■□□□ 1.01
JPH4-202ENST00000397118 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
JPH4-202ENST00000397118 PRXQ9BXM0 1461 aa21.33■■□□□ 1.01
JPH4-202ENST00000397118 LRRC9Q6ZRR7 1453 aa21.32■■□□□ 1
JPH4-202ENST00000397118 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
JPH4-202ENST00000397118 LAS1LQ9Y4W2 734 aaKnown RBP21.31■■□□□ 1
JPH4-202ENST00000397118 PRKRIP1Q9H875 184 aaPredicted RBP21.29■■□□□ 1
JPH4-202ENST00000397118 PLPPR3Q6T4P5 718 aa21.29■■□□□ 1
JPH4-202ENST00000397118 STAG3Q9UJ98 1225 aa21.29■■□□□ 1
JPH4-202ENST00000397118 SENP3Q9H4L4 574 aaPredicted RBP21.28■■□□□ 1
JPH4-202ENST00000397118 DDRGK1Q96HY6 314 aa21.27■■□□□ 1
JPH4-202ENST00000397118 NUP155O75694 1391 aa21.27■■□□□ 1
JPH4-202ENST00000397118 CDCA8Q53HL2 280 aa21.27■■□□□ 1
JPH4-202ENST00000397118 RTN4Q9NQC3 1192 aaKnown RBP21.27■□□□□ 0.99
JPH4-202ENST00000397118 FGD6Q6ZV73 1430 aa21.25■□□□□ 0.99
JPH4-202ENST00000397118 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
JPH4-202ENST00000397118 ARXQ96QS3 562 aa21.25■□□□□ 0.99
JPH4-202ENST00000397118 RGS3P49796 1198 aa21.24■□□□□ 0.99
JPH4-202ENST00000397118 HSP90AA1P07900 732 aaKnown RBP21.24■□□□□ 0.99
JPH4-202ENST00000397118 BICRAQ9NZM4 1560 aa21.24■□□□□ 0.99
JPH4-202ENST00000397118 SLC24A1O60721 1099 aa21.24■□□□□ 0.99
JPH4-202ENST00000397118 NEUROD2Q15784 382 aa21.23■□□□□ 0.99
JPH4-202ENST00000397118 TMF1P82094 1093 aa21.23■□□□□ 0.99
JPH4-202ENST00000397118 NUDCQ9Y266 331 aa21.23■□□□□ 0.99
JPH4-202ENST00000397118 TOP2BQ02880 1626 aa21.21■□□□□ 0.99
JPH4-202ENST00000397118 ANKRD30AQ9BXX3 1397 aa21.19■□□□□ 0.98
JPH4-202ENST00000397118 CARMIL2Q6F5E8 1435 aa21.19■□□□□ 0.98
JPH4-202ENST00000397118 DEKP35659 375 aaKnown RBP21.19■□□□□ 0.98
JPH4-202ENST00000397118 RCAN3Q9UKA8 241 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms