RNA–Protein interactions for RNA: ENST00000396819.7

LTBP4-205, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-205ENST00000396819 FHAD1B1AJZ9 1412 aa23.52■■□□□ 1.36
LTBP4-205ENST00000396819 ARID4BQ4LE39 1312 aaPredicted RBP23.5■■□□□ 1.35
LTBP4-205ENST00000396819 TRHP20396 242 aaPredicted RBP23.49■■□□□ 1.35
LTBP4-205ENST00000396819 NCAPD3P42695 1498 aa23.49■■□□□ 1.35
LTBP4-205ENST00000396819 KDM2AQ9Y2K7 1162 aa23.49■■□□□ 1.35
LTBP4-205ENST00000396819 CARMIL2Q6F5E8 1435 aa23.48■■□□□ 1.35
LTBP4-205ENST00000396819 CCNB3Q8WWL7 1395 aa23.41■■□□□ 1.34
LTBP4-205ENST00000396819 NEFMP07197 916 aa23.37■■□□□ 1.33
LTBP4-205ENST00000396819 JPH4Q96JJ6 628 aa23.35■■□□□ 1.33
LTBP4-205ENST00000396819 SENP3Q9H4L4 574 aaPredicted RBP23.33■■□□□ 1.33
LTBP4-205ENST00000396819 SLC24A1O60721 1099 aa23.32■■□□□ 1.32
LTBP4-205ENST00000396819 PPP1R15AO75807 674 aaPredicted RBP23.32■■□□□ 1.32
LTBP4-205ENST00000396819 RGL3Q3MIN7 710 aa23.31■■□□□ 1.32
LTBP4-205ENST00000396819 ACIN1Q9UKV3 1341 aaKnown RBP23.3■■□□□ 1.32
LTBP4-205ENST00000396819 RAPGEF2Q9Y4G8 1499 aa23.3■■□□□ 1.32
LTBP4-205ENST00000396819 FMN1Q68DA7 1419 aa23.24■■□□□ 1.31
LTBP4-205ENST00000396819 VPS8Q8N3P4 1428 aa23.24■■□□□ 1.31
LTBP4-205ENST00000396819 DDX10Q13206 875 aaKnown RBP23.22■■□□□ 1.31
LTBP4-205ENST00000396819 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
LTBP4-205ENST00000396819 KANK4Q5T7N3 995 aaPredicted RBP23.19■■□□□ 1.3
LTBP4-205ENST00000396819 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
LTBP4-205ENST00000396819 MLECQ14165 292 aa23.16■■□□□ 1.3
LTBP4-205ENST00000396819 EFCAB2Q5VUJ9 269 aa23.15■■□□□ 1.3
LTBP4-205ENST00000396819 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
LTBP4-205ENST00000396819 CLSPNQ9HAW4 1339 aa23.14■■□□□ 1.29
LTBP4-205ENST00000396819 FHOD3Q2V2M9 1422 aa23.14■■□□□ 1.29
LTBP4-205ENST00000396819 RAD54L2Q9Y4B4 1467 aa23.13■■□□□ 1.29
LTBP4-205ENST00000396819 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
LTBP4-205ENST00000396819 HIRIP3Q9BW71 556 aaPredicted RBP23.12■■□□□ 1.29
LTBP4-205ENST00000396819 DAXXQ9UER7 740 aaPredicted RBP23.12■■□□□ 1.29
LTBP4-205ENST00000396819 EIF4G2P78344 907 aaKnown RBP eCLIP23.11■■□□□ 1.291e-6■■■■□ 19.5
LTBP4-205ENST00000396819 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
LTBP4-205ENST00000396819 CYB5RLQ6IPT4 315 aa23.1■■□□□ 1.29
LTBP4-205ENST00000396819 C14orf37Q86TY3 774 aa23.1■■□□□ 1.29
LTBP4-205ENST00000396819 NESP48681 1621 aa23.07■■□□□ 1.28
LTBP4-205ENST00000396819 GGT6Q6P531 493 aa23.07■■□□□ 1.28
LTBP4-205ENST00000396819 IGF1RP08069 1367 aa23.07■■□□□ 1.28
LTBP4-205ENST00000396819 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
LTBP4-205ENST00000396819 ARHGAP35Q9NRY4 1499 aa23.06■■□□□ 1.28
LTBP4-205ENST00000396819 CFTRP13569 1480 aa23.05■■□□□ 1.28
LTBP4-205ENST00000396819 CANXP27824 592 aaKnown RBP23.04■■□□□ 1.28
LTBP4-205ENST00000396819 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.283e-7■■■■□ 25.4
LTBP4-205ENST00000396819 PTPRGP23470 1445 aa23.03■■□□□ 1.28
LTBP4-205ENST00000396819 KANK1Q14678 1352 aa23.01■■□□□ 1.27
LTBP4-205ENST00000396819 SCAF1Q9H7N4 1312 aaKnown RBP23.01■■□□□ 1.27
LTBP4-205ENST00000396819 SIN3AQ96ST3 1273 aa23■■□□□ 1.27
LTBP4-205ENST00000396819 TMC1Q8TDI8 760 aa22.98■■□□□ 1.27
LTBP4-205ENST00000396819 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
LTBP4-205ENST00000396819 FAM9BQ8IZU0 186 aa22.97■■□□□ 1.27
LTBP4-205ENST00000396819 ZBTB47Q9UFB7 747 aaPredicted RBP22.97■■□□□ 1.27
LTBP4-205ENST00000396819 HMGXB3Q12766 1538 aa22.97■■□□□ 1.27
LTBP4-205ENST00000396819 CARD11Q9BXL7 1154 aa22.95■■□□□ 1.26
LTBP4-205ENST00000396819 PLEKHG5O94827 1062 aa22.94■■□□□ 1.26
LTBP4-205ENST00000396819 HNRNPMP52272 730 aaKnown RBP eCLIP22.93■■□□□ 1.26
LTBP4-205ENST00000396819 SALL2Q9Y467 1007 aaPredicted RBP22.9■■□□□ 1.26
LTBP4-205ENST00000396819 BCL11AQ9H165 835 aa22.89■■□□□ 1.26
LTBP4-205ENST00000396819 HNRNPUQ00839 825 aaKnown RBP eCLIP22.88■■□□□ 1.25
LTBP4-205ENST00000396819 POGKQ9P215 609 aa22.88■■□□□ 1.25
LTBP4-205ENST00000396819 PKD2Q13563 968 aa22.87■■□□□ 1.25
LTBP4-205ENST00000396819 CCDC18Q5T9S5 1454 aa22.87■■□□□ 1.25
LTBP4-205ENST00000396819 MRC2Q9UBG0 1479 aa22.87■■□□□ 1.25
LTBP4-205ENST00000396819 DCAF11Q8TEB1 546 aa22.87■■□□□ 1.25
LTBP4-205ENST00000396819 CDCA8Q53HL2 280 aa22.86■■□□□ 1.25
LTBP4-205ENST00000396819 KIF3BO15066 747 aa22.86■■□□□ 1.25
LTBP4-205ENST00000396819 RSPH4AQ5TD94 716 aa22.86■■□□□ 1.25
LTBP4-205ENST00000396819 SPAG9O60271 1321 aaKnown RBP22.85■■□□□ 1.25
LTBP4-205ENST00000396819 WDR43Q15061 677 aaKnown RBP eCLIP22.85■■□□□ 1.256e-7■■□□□ 12.2
LTBP4-205ENST00000396819 MRS2Q9HD23 443 aa22.85■■□□□ 1.25
LTBP4-205ENST00000396819 ANKRD30AQ9BXX3 1397 aa22.85■■□□□ 1.25
LTBP4-205ENST00000396819 SETD5Q9C0A6 1442 aa22.85■■□□□ 1.25
LTBP4-205ENST00000396819 HDGFP51858 240 aaKnown RBP22.84■■□□□ 1.25
LTBP4-205ENST00000396819 GRIN2BQ13224 1484 aa22.83■■□□□ 1.24
LTBP4-205ENST00000396819 ZBTB7CA1YPR0 619 aa22.82■■□□□ 1.24
LTBP4-205ENST00000396819 NUP155O75694 1391 aa22.81■■□□□ 1.24
LTBP4-205ENST00000396819 FOXD1Q16676 465 aa22.79■■□□□ 1.24
LTBP4-205ENST00000396819 TOPBP1Q92547 1522 aa22.76■■□□□ 1.23
LTBP4-205ENST00000396819 GTF3C3Q9Y5Q9 886 aa22.75■■□□□ 1.23
LTBP4-205ENST00000396819 HAP1P54257 671 aaPredicted RBP22.74■■□□□ 1.23
LTBP4-205ENST00000396819 KNSTRNQ9Y448 316 aa22.74■■□□□ 1.23
LTBP4-205ENST00000396819 IFT140Q96RY7 1462 aa22.74■■□□□ 1.23
LTBP4-205ENST00000396819 MPHOSPH9Q99550 1183 aa22.74■■□□□ 1.23
LTBP4-205ENST00000396819 LMOD2Q6P5Q4 547 aa22.7■■□□□ 1.22
LTBP4-205ENST00000396819 WASHC2CQ9Y4E1 1318 aa22.7■■□□□ 1.22
LTBP4-205ENST00000396819 POLA1P09884 1462 aaPredicted RBP22.7■■□□□ 1.22
LTBP4-205ENST00000396819 A0A0G2JS52 829 aa22.69■■□□□ 1.22
LTBP4-205ENST00000396819 RAB3GAP2Q9H2M9 1393 aa22.69■■□□□ 1.22
LTBP4-205ENST00000396819 TIMELESSQ9UNS1 1208 aa22.68■■□□□ 1.22
LTBP4-205ENST00000396819 FAM69CQ0P6D2 419 aa22.68■■□□□ 1.22
LTBP4-205ENST00000396819 PPM1GO15355 546 aaPredicted RBP22.67■■□□□ 1.22
LTBP4-205ENST00000396819 SYNJ1O43426 1573 aa22.66■■□□□ 1.22
LTBP4-205ENST00000396819 MIER1Q8N108 512 aa22.65■■□□□ 1.22
LTBP4-205ENST00000396819 SAFB2Q14151 953 aaKnown RBP eCLIP22.64■■□□□ 1.21
LTBP4-205ENST00000396819 CFAP53Q96M91 514 aa22.62■■□□□ 1.21
LTBP4-205ENST00000396819 CUX1P39880 1505 aa22.62■■□□□ 1.21
LTBP4-205ENST00000396819 STK26Q9P289 416 aa22.62■■□□□ 1.21
LTBP4-205ENST00000396819 TMF1P82094 1093 aa22.6■■□□□ 1.21
LTBP4-205ENST00000396819 MYT1Q01538 1121 aa22.59■■□□□ 1.21
LTBP4-205ENST00000396819 PRG4Q92954 1404 aaPredicted RBP22.59■■□□□ 1.21
LTBP4-205ENST00000396819 SRPK2P78362 688 aaKnown RBP22.58■■□□□ 1.21
LTBP4-205ENST00000396819 LAMC3Q9Y6N6 1575 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms