RNA–Protein interactions for RNA: ENST00000395525.7

SPECC1-203, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-203ENST00000395525 FAM50AQ14320 339 aaKnown RBP25.17■■□□□ 1.62
SPECC1-203ENST00000395525 SUPT16HQ9Y5B9 1047 aaKnown RBP25.16■■□□□ 1.62
SPECC1-203ENST00000395525 MAP3K1Q13233 1512 aa25.16■■□□□ 1.62
SPECC1-203ENST00000395525 ATP1B4Q9UN42 357 aaPredicted RBP25.16■■□□□ 1.62
SPECC1-203ENST00000395525 SETD5Q9C0A6 1442 aa25.15■■□□□ 1.62
SPECC1-203ENST00000395525 SIN3AQ96ST3 1273 aa25.15■■□□□ 1.62
SPECC1-203ENST00000395525 PCF11O94913 1555 aaKnown RBP25.12■■□□□ 1.61
SPECC1-203ENST00000395525 WDR97A6NE52 1622 aa25.08■■□□□ 1.61
SPECC1-203ENST00000395525 FHOD3Q2V2M9 1422 aa25.07■■□□□ 1.6
SPECC1-203ENST00000395525 CFAP43Q8NDM7 1665 aa25.06■■□□□ 1.6
SPECC1-203ENST00000395525 RAD54L2Q9Y4B4 1467 aa25.05■■□□□ 1.6
SPECC1-203ENST00000395525 FHAD1B1AJZ9 1412 aa25.04■■□□□ 1.6
SPECC1-203ENST00000395525 FANCD2Q9BXW9 1451 aa25.02■■□□□ 1.6
SPECC1-203ENST00000395525 DDX10Q13206 875 aaKnown RBP25■■□□□ 1.59
SPECC1-203ENST00000395525 HIRIP3Q9BW71 556 aaPredicted RBP24.99■■□□□ 1.59
SPECC1-203ENST00000395525 CC2D2AQ9P2K1 1620 aa24.96■■□□□ 1.59
SPECC1-203ENST00000395525 POLA1P09884 1462 aaPredicted RBP24.92■■□□□ 1.58
SPECC1-203ENST00000395525 FYCO1Q9BQS8 1478 aa24.9■■□□□ 1.58
SPECC1-203ENST00000395525 NESP48681 1621 aa24.9■■□□□ 1.58
SPECC1-203ENST00000395525 DNMBPQ6XZF7 1577 aa24.89■■□□□ 1.58
SPECC1-203ENST00000395525 ABCA10Q8WWZ4 1543 aa24.89■■□□□ 1.58
SPECC1-203ENST00000395525 TOPBP1Q92547 1522 aa24.88■■□□□ 1.57
SPECC1-203ENST00000395525 CASKIN1Q8WXD9 1431 aa24.88■■□□□ 1.57
SPECC1-203ENST00000395525 PPP1R15AO75807 674 aaPredicted RBP24.86■■□□□ 1.57
SPECC1-203ENST00000395525 MYT1Q01538 1121 aa24.86■■□□□ 1.57
SPECC1-203ENST00000395525 EFCAB5A4FU69 1503 aa24.84■■□□□ 1.57
SPECC1-203ENST00000395525 CTTNBP2Q8WZ74 1663 aa24.81■■□□□ 1.56
SPECC1-203ENST00000395525 BCANQ96GW7 911 aa24.81■■□□□ 1.56
SPECC1-203ENST00000395525 TSHZ2Q9NRE2 1034 aa24.8■■□□□ 1.56
SPECC1-203ENST00000395525 FGD6Q6ZV73 1430 aa24.79■■□□□ 1.56
SPECC1-203ENST00000395525 AQRO60306 1485 aaKnown RBP eCLIP24.79■■□□□ 1.56
SPECC1-203ENST00000395525 PTPRKQ15262 1439 aa24.79■■□□□ 1.56
SPECC1-203ENST00000395525 CUL7Q14999 1698 aa24.77■■□□□ 1.56
SPECC1-203ENST00000395525 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
SPECC1-203ENST00000395525 TIMELESSQ9UNS1 1208 aa24.75■■□□□ 1.55
SPECC1-203ENST00000395525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.75■■□□□ 1.55
SPECC1-203ENST00000395525 CCDC18Q5T9S5 1454 aa24.74■■□□□ 1.55
SPECC1-203ENST00000395525 MTUS2Q5JR59 1369 aa24.73■■□□□ 1.55
SPECC1-203ENST00000395525 FMN1Q68DA7 1419 aa24.73■■□□□ 1.55
SPECC1-203ENST00000395525 LRRIQ1Q96JM4 1722 aa24.72■■□□□ 1.55
SPECC1-203ENST00000395525 TDRD9Q8NDG6 1382 aaKnown RBP24.71■■□□□ 1.55
SPECC1-203ENST00000395525 FKBP8Q14318 412 aa24.7■■□□□ 1.54
SPECC1-203ENST00000395525 TRIM52Q96A61 297 aa24.69■■□□□ 1.54
SPECC1-203ENST00000395525 TONSLQ96HA7 1378 aa24.69■■□□□ 1.54
SPECC1-203ENST00000395525 URB2Q14146 1524 aaKnown RBP24.68■■□□□ 1.54
SPECC1-203ENST00000395525 PTPN23Q9H3S7 1636 aa24.66■■□□□ 1.54
SPECC1-203ENST00000395525 HFM1A2PYH4 1435 aa24.65■■□□□ 1.54
SPECC1-203ENST00000395525 NCOA2Q15596 1464 aa24.64■■□□□ 1.53
SPECC1-203ENST00000395525 ANP32CO43423 234 aa24.64■■□□□ 1.53
SPECC1-203ENST00000395525 UACAQ9BZF9 1416 aa24.63■■□□□ 1.53
SPECC1-203ENST00000395525 SAMD9Q5K651 1589 aa24.63■■□□□ 1.53
SPECC1-203ENST00000395525 NAIPQ13075 1403 aa24.61■■□□□ 1.53
SPECC1-203ENST00000395525 GRIN2BQ13224 1484 aa24.6■■□□□ 1.53
SPECC1-203ENST00000395525 MYOM3Q5VTT5 1437 aa24.59■■□□□ 1.53
SPECC1-203ENST00000395525 CCER2I3L3R5 266 aa24.59■■□□□ 1.53
SPECC1-203ENST00000395525 ABCA5Q8WWZ7 1642 aa24.58■■□□□ 1.53
SPECC1-203ENST00000395525 GAPVD1Q14C86 1478 aa24.57■■□□□ 1.52
SPECC1-203ENST00000395525 MAGI3Q5TCQ9 1506 aa24.55■■□□□ 1.52
SPECC1-203ENST00000395525 RRP7BPQ9NSQ0 103 aa24.54■■□□□ 1.52
SPECC1-203ENST00000395525 KDM5BQ9UGL1 1544 aa24.54■■□□□ 1.52
SPECC1-203ENST00000395525 CHIC2Q9UKJ5 165 aa24.54■■□□□ 1.52
SPECC1-203ENST00000395525 SUPT6HQ7KZ85 1726 aaKnown RBP24.52■■□□□ 1.52
SPECC1-203ENST00000395525 DNAJC5BQ9UF47 199 aa24.52■■□□□ 1.52
SPECC1-203ENST00000395525 EHBP1L1Q8N3D4 1523 aa24.49■■□□□ 1.51
SPECC1-203ENST00000395525 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
SPECC1-203ENST00000395525 UGGT2Q9NYU1 1516 aa24.47■■□□□ 1.51
SPECC1-203ENST00000395525 ARID3CA6NKF2 412 aa24.45■■□□□ 1.5
SPECC1-203ENST00000395525 NEFLP07196 543 aa24.45■■□□□ 1.5
SPECC1-203ENST00000395525 DENND4BO75064 1496 aaPredicted RBP24.44■■□□□ 1.5
SPECC1-203ENST00000395525 THOC2Q8NI27 1593 aaKnown RBP24.44■■□□□ 1.5
SPECC1-203ENST00000395525 KDM6BO15054 1643 aa24.43■■□□□ 1.5
SPECC1-203ENST00000395525 ARHGEF11O15085 1522 aa24.43■■□□□ 1.5
SPECC1-203ENST00000395525 HSPA5P11021 654 aaKnown RBP24.39■■□□□ 1.49
SPECC1-203ENST00000395525 WASHC2AQ641Q2 1341 aa24.39■■□□□ 1.49
SPECC1-203ENST00000395525 KIF21AQ7Z4S6 1674 aa24.38■■□□□ 1.49
SPECC1-203ENST00000395525 FOXD1Q16676 465 aa24.37■■□□□ 1.49
SPECC1-203ENST00000395525 CDK13Q14004 1512 aaKnown RBP24.36■■□□□ 1.49
SPECC1-203ENST00000395525 TCOF1Q13428 1488 aaKnown RBP24.35■■□□□ 1.49
SPECC1-203ENST00000395525 HNRNPUQ00839 825 aaKnown RBP eCLIP24.34■■□□□ 1.49
SPECC1-203ENST00000395525 PDS5BQ9NTI5 1447 aa24.34■■□□□ 1.49
SPECC1-203ENST00000395525 TARBP1Q13395 1621 aaKnown RBP24.34■■□□□ 1.49
SPECC1-203ENST00000395525 GCC2Q8IWJ2 1684 aa24.34■■□□□ 1.49
SPECC1-203ENST00000395525 ANP32EQ9BTT0 268 aa24.33■■□□□ 1.49
SPECC1-203ENST00000395525 HECW1Q76N89 1606 aa24.32■■□□□ 1.48
SPECC1-203ENST00000395525 EPRSP07814 1512 aaKnown RBP24.32■■□□□ 1.48
SPECC1-203ENST00000395525 IRX6P78412 446 aaPredicted RBP24.3■■□□□ 1.48
SPECC1-203ENST00000395525 MPHOSPH9Q99550 1183 aa24.29■■□□□ 1.48
SPECC1-203ENST00000395525 RBM19Q9Y4C8 960 aaKnown RBP24.29■■□□□ 1.48
SPECC1-203ENST00000395525 CCDC184Q52MB2 194 aa24.28■■□□□ 1.48
SPECC1-203ENST00000395525 L3MBTL2Q969R5 705 aa24.27■■□□□ 1.48
SPECC1-203ENST00000395525 C11orf95C9JLR9 678 aaPredicted RBP24.26■■□□□ 1.47
SPECC1-203ENST00000395525 IQGAP2Q13576 1575 aa24.26■■□□□ 1.47
SPECC1-203ENST00000395525 PBRM1Q86U86 1689 aa24.26■■□□□ 1.47
SPECC1-203ENST00000395525 EIF4G2P78344 907 aaKnown RBP eCLIP24.24■■□□□ 1.47
SPECC1-203ENST00000395525 WDR62O43379 1518 aa24.22■■□□□ 1.47
SPECC1-203ENST00000395525 AKNAQ7Z591 1439 aa24.21■■□□□ 1.47
SPECC1-203ENST00000395525 ZNF644Q9H582 1327 aaPredicted RBP24.19■■□□□ 1.46
SPECC1-203ENST00000395525 ADAMTS12P58397 1594 aa24.19■■□□□ 1.46
SPECC1-203ENST00000395525 MIA2Q96PC5 1412 aa24.18■■□□□ 1.46
SPECC1-203ENST00000395525 NBPF8Q3BBV2 869 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms