RNA–Protein interactions for RNA: ENST00000395460.6

C11orf49-204, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 1 (best) BASIC

Gene C11orf49, Length 1,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-204ENST00000395460 EFCAB5A4FU69 1503 aa24.2■■□□□ 1.46
C11orf49-204ENST00000395460 YTHDC1Q96MU7 727 aaKnown RBP24.18■■□□□ 1.46
C11orf49-204ENST00000395460 RAB3GAP2Q9H2M9 1393 aa24.17■■□□□ 1.46
C11orf49-204ENST00000395460 AQRO60306 1485 aaKnown RBP eCLIP24.16■■□□□ 1.46
C11orf49-204ENST00000395460 CUL7Q14999 1698 aa24.16■■□□□ 1.46
C11orf49-204ENST00000395460 TOPBP1Q92547 1522 aa24.14■■□□□ 1.46
C11orf49-204ENST00000395460 SETD5Q9C0A6 1442 aa24.14■■□□□ 1.46
C11orf49-204ENST00000395460 PCF11O94913 1555 aaKnown RBP24.14■■□□□ 1.45
C11orf49-204ENST00000395460 FYCO1Q9BQS8 1478 aa24.14■■□□□ 1.45
C11orf49-204ENST00000395460 MAPKBP1O60336 1514 aa24.13■■□□□ 1.45
C11orf49-204ENST00000395460 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
C11orf49-204ENST00000395460 PHLDB1Q86UU1 1377 aa24.12■■□□□ 1.45
C11orf49-204ENST00000395460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.12■■□□□ 1.45
C11orf49-204ENST00000395460 CASKIN1Q8WXD9 1431 aa24.09■■□□□ 1.45
C11orf49-204ENST00000395460 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
C11orf49-204ENST00000395460 CTTNBP2Q8WZ74 1663 aa24.03■■□□□ 1.44
C11orf49-204ENST00000395460 ITGAEP38570 1179 aa24.02■■□□□ 1.44
C11orf49-204ENST00000395460 LAMC3Q9Y6N6 1575 aa24.01■■□□□ 1.43
C11orf49-204ENST00000395460 TIMELESSQ9UNS1 1208 aa24.01■■□□□ 1.43
C11orf49-204ENST00000395460 WDR97A6NE52 1622 aa24■■□□□ 1.43
C11orf49-204ENST00000395460 FHOD3Q2V2M9 1422 aa24■■□□□ 1.43
C11orf49-204ENST00000395460 FMN1Q68DA7 1419 aa24■■□□□ 1.43
C11orf49-204ENST00000395460 NESP48681 1621 aa23.93■■□□□ 1.42
C11orf49-204ENST00000395460 SNAPC4Q5SXM2 1469 aa23.93■■□□□ 1.42
C11orf49-204ENST00000395460 ABCA5Q8WWZ7 1642 aa23.92■■□□□ 1.42
C11orf49-204ENST00000395460 FAM50AQ14320 339 aaKnown RBP23.91■■□□□ 1.42
C11orf49-204ENST00000395460 SAMD9Q5K651 1589 aa23.91■■□□□ 1.42
C11orf49-204ENST00000395460 URB2Q14146 1524 aaKnown RBP23.9■■□□□ 1.42
C11orf49-204ENST00000395460 P3H3Q8IVL6 736 aa23.88■■□□□ 1.41
C11orf49-204ENST00000395460 THOC2Q8NI27 1593 aaKnown RBP23.88■■□□□ 1.41
C11orf49-204ENST00000395460 FGD6Q6ZV73 1430 aa23.86■■□□□ 1.41
C11orf49-204ENST00000395460 GAPVD1Q14C86 1478 aa23.81■■□□□ 1.4
C11orf49-204ENST00000395460 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
C11orf49-204ENST00000395460 GRIN2BQ13224 1484 aa23.79■■□□□ 1.4
C11orf49-204ENST00000395460 ATP1B4Q9UN42 357 aaPredicted RBP23.79■■□□□ 1.4
C11orf49-204ENST00000395460 HFM1A2PYH4 1435 aa23.78■■□□□ 1.4
C11orf49-204ENST00000395460 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
C11orf49-204ENST00000395460 MTUS2Q5JR59 1369 aa23.77■■□□□ 1.4
C11orf49-204ENST00000395460 SIN3AQ96ST3 1273 aa23.74■■□□□ 1.39
C11orf49-204ENST00000395460 EHBP1L1Q8N3D4 1523 aa23.74■■□□□ 1.39
C11orf49-204ENST00000395460 MYOM3Q5VTT5 1437 aa23.73■■□□□ 1.39
C11orf49-204ENST00000395460 TDRD9Q8NDG6 1382 aaKnown RBP23.73■■□□□ 1.39
C11orf49-204ENST00000395460 UACAQ9BZF9 1416 aa23.72■■□□□ 1.39
C11orf49-204ENST00000395460 CCDC18Q5T9S5 1454 aa23.72■■□□□ 1.39
C11orf49-204ENST00000395460 PPP1R15AO75807 674 aaPredicted RBP23.72■■□□□ 1.39
C11orf49-204ENST00000395460 NCOA2Q15596 1464 aa23.71■■□□□ 1.39
C11orf49-204ENST00000395460 SUPT6HQ7KZ85 1726 aaKnown RBP23.7■■□□□ 1.38
C11orf49-204ENST00000395460 LRRIQ1Q96JM4 1722 aa23.69■■□□□ 1.38
C11orf49-204ENST00000395460 PTPN23Q9H3S7 1636 aa23.69■■□□□ 1.38
C11orf49-204ENST00000395460 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
C11orf49-204ENST00000395460 MYT1Q01538 1121 aa23.67■■□□□ 1.38
C11orf49-204ENST00000395460 TARBP1Q13395 1621 aaKnown RBP23.67■■□□□ 1.38
C11orf49-204ENST00000395460 PTPRKQ15262 1439 aa23.66■■□□□ 1.38
C11orf49-204ENST00000395460 SUPT16HQ9Y5B9 1047 aaKnown RBP23.65■■□□□ 1.38
C11orf49-204ENST00000395460 UGGT2Q9NYU1 1516 aa23.65■■□□□ 1.38
C11orf49-204ENST00000395460 NAIPQ13075 1403 aa23.64■■□□□ 1.37
C11orf49-204ENST00000395460 TCOF1Q13428 1488 aaKnown RBP23.61■■□□□ 1.37
C11orf49-204ENST00000395460 TONSLQ96HA7 1378 aa23.6■■□□□ 1.37
C11orf49-204ENST00000395460 AKNAQ7Z591 1439 aa23.59■■□□□ 1.37
C11orf49-204ENST00000395460 HECW1Q76N89 1606 aa23.58■■□□□ 1.37
C11orf49-204ENST00000395460 CCER2I3L3R5 266 aa23.57■■□□□ 1.36
C11orf49-204ENST00000395460 DDX10Q13206 875 aaKnown RBP23.57■■□□□ 1.36
C11orf49-204ENST00000395460 MAGI3Q5TCQ9 1506 aa23.53■■□□□ 1.36
C11orf49-204ENST00000395460 PBRM1Q86U86 1689 aa23.53■■□□□ 1.36
C11orf49-204ENST00000395460 IQGAP2Q13576 1575 aa23.53■■□□□ 1.36
C11orf49-204ENST00000395460 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
C11orf49-204ENST00000395460 GCC2Q8IWJ2 1684 aa23.51■■□□□ 1.35
C11orf49-204ENST00000395460 MIA2Q96PC5 1412 aa23.51■■□□□ 1.35
C11orf49-204ENST00000395460 KCNH8Q96L42 1107 aa23.5■■□□□ 1.35
C11orf49-204ENST00000395460 EPRSP07814 1512 aaKnown RBP23.48■■□□□ 1.35
C11orf49-204ENST00000395460 KDM5BQ9UGL1 1544 aa23.47■■□□□ 1.35
C11orf49-204ENST00000395460 ANP32CO43423 234 aa23.45■■□□□ 1.35
C11orf49-204ENST00000395460 WDR62O43379 1518 aa23.45■■□□□ 1.34
C11orf49-204ENST00000395460 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
C11orf49-204ENST00000395460 DENND4BO75064 1496 aaPredicted RBP23.36■■□□□ 1.33
C11orf49-204ENST00000395460 IFT140Q96RY7 1462 aa23.34■■□□□ 1.33
C11orf49-204ENST00000395460 DNAJC5BQ9UF47 199 aa23.34■■□□□ 1.33
C11orf49-204ENST00000395460 ROCK1Q13464 1354 aa23.34■■□□□ 1.33
C11orf49-204ENST00000395460 HIRIP3Q9BW71 556 aaPredicted RBP23.33■■□□□ 1.32
C11orf49-204ENST00000395460 CDK13Q14004 1512 aaKnown RBP23.32■■□□□ 1.32
C11orf49-204ENST00000395460 KIAA0586Q9BVV6 1533 aa23.32■■□□□ 1.32
C11orf49-204ENST00000395460 RRP7BPQ9NSQ0 103 aa23.29■■□□□ 1.32
C11orf49-204ENST00000395460 KIAA0556O60303 1618 aa23.28■■□□□ 1.32
C11orf49-204ENST00000395460 KDM6BO15054 1643 aa23.27■■□□□ 1.32
C11orf49-204ENST00000395460 DISP1Q96F81 1524 aa23.25■■□□□ 1.31
C11orf49-204ENST00000395460 DNMT1P26358 1616 aaKnown RBP23.25■■□□□ 1.31
C11orf49-204ENST00000395460 DAPK1P53355 1430 aa23.24■■□□□ 1.31
C11orf49-204ENST00000395460 MPHOSPH9Q99550 1183 aa23.23■■□□□ 1.31
C11orf49-204ENST00000395460 TSHZ2Q9NRE2 1034 aa23.23■■□□□ 1.31
C11orf49-204ENST00000395460 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
C11orf49-204ENST00000395460 NUP153P49790 1475 aaKnown RBP23.21■■□□□ 1.31
C11orf49-204ENST00000395460 TRIM52Q96A61 297 aa23.21■■□□□ 1.31
C11orf49-204ENST00000395460 NEFLP07196 543 aa23.2■■□□□ 1.3
C11orf49-204ENST00000395460 RAPGEF6Q8TEU7 1601 aa23.19■■□□□ 1.3
C11orf49-204ENST00000395460 ABCC5O15440 1437 aa23.19■■□□□ 1.3
C11orf49-204ENST00000395460 FKBP8Q14318 412 aa23.19■■□□□ 1.3
C11orf49-204ENST00000395460 HSPA5P11021 654 aaKnown RBP23.18■■□□□ 1.3
C11orf49-204ENST00000395460 EIF4G2P78344 907 aaKnown RBP eCLIP23.18■■□□□ 1.3
C11orf49-204ENST00000395460 RPRD2Q5VT52 1461 aaKnown RBP23.18■■□□□ 1.3
C11orf49-204ENST00000395460 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms