RNA–Protein interactions for RNA: ENST00000393612.8

COG4-202, Transcript of component of oligomeric golgi complex 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COG4, Length 2,756 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG4-202ENST00000393612 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
COG4-202ENST00000393612 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
COG4-202ENST00000393612 ITGAEP38570 1179 aa17.42■□□□□ 0.38
COG4-202ENST00000393612 SOGA1O94964 1423 aa17.41■□□□□ 0.38
COG4-202ENST00000393612 TDRD9Q8NDG6 1382 aaKnown RBP17.41■□□□□ 0.38
COG4-202ENST00000393612 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
COG4-202ENST00000393612 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
COG4-202ENST00000393612 ZNF608Q9ULD9 1512 aaPredicted RBP17.39■□□□□ 0.37
COG4-202ENST00000393612 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
COG4-202ENST00000393612 AQRO60306 1485 aaKnown RBP eCLIP17.36■□□□□ 0.371e-8■■■■□ 25.9
COG4-202ENST00000393612 ERICH6BQ5W0A0 696 aa17.35■□□□□ 0.37
COG4-202ENST00000393612 DHX57Q6P158 1386 aaKnown RBP17.31■□□□□ 0.36
COG4-202ENST00000393612 TARBP1Q13395 1621 aaKnown RBP17.3■□□□□ 0.36
COG4-202ENST00000393612 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
COG4-202ENST00000393612 SALL2Q9Y467 1007 aaPredicted RBP17.29■□□□□ 0.36
COG4-202ENST00000393612 UBTFP17480 764 aaKnown RBP17.28■□□□□ 0.36
COG4-202ENST00000393612 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
COG4-202ENST00000393612 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
COG4-202ENST00000393612 EEA1Q15075 1411 aa17.23■□□□□ 0.35
COG4-202ENST00000393612 GOLGA3Q08378 1498 aa17.22■□□□□ 0.35
COG4-202ENST00000393612 ABCA10Q8WWZ4 1543 aa17.22■□□□□ 0.35
COG4-202ENST00000393612 FBLN2P98095 1184 aa17.21■□□□□ 0.35
COG4-202ENST00000393612 UBE2Q2Q8WVN8 375 aa17.21■□□□□ 0.35
COG4-202ENST00000393612 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
COG4-202ENST00000393612 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
COG4-202ENST00000393612 TRIM52Q96A61 297 aa17.16■□□□□ 0.34
COG4-202ENST00000393612 CCDC136Q96JN2 1154 aa17.16■□□□□ 0.34
COG4-202ENST00000393612 KIF27Q86VH2 1401 aa17.16■□□□□ 0.34
COG4-202ENST00000393612 IGF1RP08069 1367 aa17.14■□□□□ 0.34
COG4-202ENST00000393612 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
COG4-202ENST00000393612 NBR1Q14596 966 aa17.13■□□□□ 0.33
COG4-202ENST00000393612 NOP58Q9Y2X3 529 aaKnown RBP17.11■□□□□ 0.33
COG4-202ENST00000393612 ABCA5Q8WWZ7 1642 aa17.11■□□□□ 0.33
COG4-202ENST00000393612 CLIP1P30622 1438 aa17.1■□□□□ 0.33
COG4-202ENST00000393612 CCER2I3L3R5 266 aa17.09■□□□□ 0.33
COG4-202ENST00000393612 RANGAP1P46060 587 aaPredicted RBP17.09■□□□□ 0.33
COG4-202ENST00000393612 SNAPC4Q5SXM2 1469 aa17.09■□□□□ 0.33
COG4-202ENST00000393612 DDX10Q13206 875 aaKnown RBP17.09■□□□□ 0.33
COG4-202ENST00000393612 GRIN2BQ13224 1484 aa17.06■□□□□ 0.32
COG4-202ENST00000393612 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
COG4-202ENST00000393612 CHMP7Q8WUX9 453 aaPredicted RBP17.05■□□□□ 0.32
COG4-202ENST00000393612 IL27Q8NEV9 243 aa17.04■□□□□ 0.32
COG4-202ENST00000393612 CARMIL1Q5VZK9 1371 aa17.03■□□□□ 0.32
COG4-202ENST00000393612 RTL5Q5HYW3 569 aaPredicted RBP17.03■□□□□ 0.32
COG4-202ENST00000393612 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.02■□□□□ 0.31
COG4-202ENST00000393612 ANP32CO43423 234 aa17■□□□□ 0.31
COG4-202ENST00000393612 IRX6P78412 446 aaPredicted RBP17■□□□□ 0.31
COG4-202ENST00000393612 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
COG4-202ENST00000393612 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
COG4-202ENST00000393612 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
COG4-202ENST00000393612 RTN4Q9NQC3 1192 aaKnown RBP16.99■□□□□ 0.31
COG4-202ENST00000393612 KIF21BO75037 1637 aa16.98■□□□□ 0.31
COG4-202ENST00000393612 PPP4R2Q9NY27 417 aa16.97■□□□□ 0.31
COG4-202ENST00000393612 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
COG4-202ENST00000393612 ADAMTS12P58397 1594 aa16.93■□□□□ 0.3
COG4-202ENST00000393612 PRXQ9BXM0 1461 aa16.93■□□□□ 0.3
COG4-202ENST00000393612 FHAD1B1AJZ9 1412 aa16.92■□□□□ 0.3
COG4-202ENST00000393612 CHD1O14646 1710 aa16.92■□□□□ 0.3
COG4-202ENST00000393612 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
COG4-202ENST00000393612 SYNJ2O15056 1496 aa16.9■□□□□ 0.3
COG4-202ENST00000393612 MAPKBP1O60336 1514 aa16.89■□□□□ 0.29
COG4-202ENST00000393612 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
COG4-202ENST00000393612 RRBP1Q9P2E9 1410 aaKnown RBP16.88■□□□□ 0.29
COG4-202ENST00000393612 HNRNPUQ00839 825 aaKnown RBP eCLIP16.87■□□□□ 0.29
COG4-202ENST00000393612 P3H3Q8IVL6 736 aa16.86■□□□□ 0.29
COG4-202ENST00000393612 IPO9Q96P70 1041 aaKnown RBP16.86■□□□□ 0.29
COG4-202ENST00000393612 ANP32AP39687 249 aaKnown RBP16.85■□□□□ 0.29
COG4-202ENST00000393612 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
COG4-202ENST00000393612 CUL7Q14999 1698 aa16.85■□□□□ 0.29
COG4-202ENST00000393612 CEP170Q5SW79 1584 aa16.83■□□□□ 0.28
COG4-202ENST00000393612 B4GALNT3Q6L9W6 998 aa16.83■□□□□ 0.28
COG4-202ENST00000393612 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.28
COG4-202ENST00000393612 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
COG4-202ENST00000393612 C11orf95C9JLR9 678 aaPredicted RBP16.79■□□□□ 0.28
COG4-202ENST00000393612 RAB3GAP2Q9H2M9 1393 aa16.78■□□□□ 0.28
COG4-202ENST00000393612 EIF5BO60841 1220 aaKnown RBP16.77■□□□□ 0.28
COG4-202ENST00000393612 DNAJC5Q9H3Z4 198 aa16.77■□□□□ 0.28
COG4-202ENST00000393612 HIRIP3Q9BW71 556 aaPredicted RBP16.77■□□□□ 0.27
COG4-202ENST00000393612 CCNB3Q8WWL7 1395 aa16.76■□□□□ 0.27
COG4-202ENST00000393612 JPH4Q96JJ6 628 aa16.75■□□□□ 0.27
COG4-202ENST00000393612 PKNOX2Q96KN3 472 aa16.75■□□□□ 0.27
COG4-202ENST00000393612 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
COG4-202ENST00000393612 NUP160Q12769 1436 aa16.74■□□□□ 0.27
COG4-202ENST00000393612 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
COG4-202ENST00000393612 WASHC2CQ9Y4E1 1318 aa16.73■□□□□ 0.27
COG4-202ENST00000393612 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
COG4-202ENST00000393612 ERCC6L2Q5T890 1561 aa16.71■□□□□ 0.27
COG4-202ENST00000393612 SIN3AQ96ST3 1273 aa16.7■□□□□ 0.26
COG4-202ENST00000393612 KIAA0586Q9BVV6 1533 aa16.68■□□□□ 0.26
COG4-202ENST00000393612 NEFMP07197 916 aa16.68■□□□□ 0.26
COG4-202ENST00000393612 ARAP1Q96P48 1450 aa16.66■□□□□ 0.26
COG4-202ENST00000393612 ARID3CA6NKF2 412 aa16.66■□□□□ 0.26
COG4-202ENST00000393612 CTTNBP2Q8WZ74 1663 aa16.65■□□□□ 0.26
COG4-202ENST00000393612 IQGAP2Q13576 1575 aa16.65■□□□□ 0.26
COG4-202ENST00000393612 PRG4Q92954 1404 aaPredicted RBP16.65■□□□□ 0.26
COG4-202ENST00000393612 CLASP1Q7Z460 1538 aa16.64■□□□□ 0.26
COG4-202ENST00000393612 SETD5Q9C0A6 1442 aa16.64■□□□□ 0.25
COG4-202ENST00000393612 BRPF3Q9ULD4 1205 aa16.63■□□□□ 0.25
COG4-202ENST00000393612 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
COG4-202ENST00000393612 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms