RNA–Protein interactions for RNA: ENST00000393612.8

COG4-202, Transcript of component of oligomeric golgi complex 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COG4, Length 2,756 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG4-202ENST00000393612 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
COG4-202ENST00000393612 CCDC180Q9P1Z9 1646 aa21.32■■□□□ 1
COG4-202ENST00000393612 HRCP23327 699 aa20.88■□□□□ 0.93
COG4-202ENST00000393612 PELP1Q8IZL8 1130 aaKnown RBP20.87■□□□□ 0.93
COG4-202ENST00000393612 ABCC9O60706 1549 aa20.82■□□□□ 0.92
COG4-202ENST00000393612 DCAF8L2P0C7V8 631 aa20.61■□□□□ 0.89
COG4-202ENST00000393612 PPARGC1BQ86YN6 1023 aaKnown RBP20.32■□□□□ 0.84
COG4-202ENST00000393612 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
COG4-202ENST00000393612 MYT1Q01538 1121 aa20.23■□□□□ 0.83
COG4-202ENST00000393612 PCGF6Q9BYE7 350 aa20.19■□□□□ 0.82
COG4-202ENST00000393612 MYO15BQ96JP2 1530 aa20.04■□□□□ 0.8
COG4-202ENST00000393612 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
COG4-202ENST00000393612 NACADO15069 1562 aa19.92■□□□□ 0.78
COG4-202ENST00000393612 DCAF1Q9Y4B6 1507 aa19.88■□□□□ 0.77
COG4-202ENST00000393612 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
COG4-202ENST00000393612 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
COG4-202ENST00000393612 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.75
COG4-202ENST00000393612 SCRIBQ14160 1630 aa19.71■□□□□ 0.75
COG4-202ENST00000393612 PABPN1Q86U42 306 aaKnown RBP eCLIP19.68■□□□□ 0.741e-7■■■□□ 14.6
COG4-202ENST00000393612 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
COG4-202ENST00000393612 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
COG4-202ENST00000393612 ZEB1P37275 1124 aaPredicted RBP19.54■□□□□ 0.72
COG4-202ENST00000393612 TRIM26Q12899 539 aaPredicted RBP19.5■□□□□ 0.71
COG4-202ENST00000393612 BICRAQ9NZM4 1560 aa19.39■□□□□ 0.69
COG4-202ENST00000393612 ACIN1Q9UKV3 1341 aaKnown RBP19.37■□□□□ 0.69
COG4-202ENST00000393612 NEUROD1Q13562 356 aa19.25■□□□□ 0.67
COG4-202ENST00000393612 GTF3C3Q9Y5Q9 886 aa19.21■□□□□ 0.67
COG4-202ENST00000393612 LOC105371045A0A1W2PR82 267 aa19.17■□□□□ 0.66
COG4-202ENST00000393612 TTBK1Q5TCY1 1321 aaPredicted RBP19.12■□□□□ 0.65
COG4-202ENST00000393612 CENPBP07199 599 aaPredicted RBP19.11■□□□□ 0.65
COG4-202ENST00000393612 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
COG4-202ENST00000393612 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
COG4-202ENST00000393612 MROH2BQ7Z745 1585 aa18.84■□□□□ 0.61
COG4-202ENST00000393612 EIF4G1Q04637 1599 aaKnown RBP18.82■□□□□ 0.6
COG4-202ENST00000393612 DIEXFQ68CQ4 756 aaKnown RBP18.81■□□□□ 0.6
COG4-202ENST00000393612 BCL11AQ9H165 835 aa18.74■□□□□ 0.59
COG4-202ENST00000393612 SMARCA4P51532 1647 aa18.73■□□□□ 0.59
COG4-202ENST00000393612 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
COG4-202ENST00000393612 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
COG4-202ENST00000393612 BAZ1AQ9NRL2 1556 aaPredicted RBP18.7■□□□□ 0.58
COG4-202ENST00000393612 WIZO95785 1651 aa18.67■□□□□ 0.58
COG4-202ENST00000393612 CCER1Q8TC90 406 aaPredicted RBP18.59■□□□□ 0.57
COG4-202ENST00000393612 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.56
COG4-202ENST00000393612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.56■□□□□ 0.56
COG4-202ENST00000393612 FAM9AQ8IZU1 332 aaPredicted RBP18.55■□□□□ 0.56
COG4-202ENST00000393612 ANP32EQ9BTT0 268 aa18.51■□□□□ 0.55
COG4-202ENST00000393612 TRIM41Q8WV44 630 aa18.49■□□□□ 0.55
COG4-202ENST00000393612 YTHDC1Q96MU7 727 aaKnown RBP18.49■□□□□ 0.55
COG4-202ENST00000393612 BAZ1BQ9UIG0 1483 aaKnown RBP18.44■□□□□ 0.54
COG4-202ENST00000393612 SMARCA2P51531 1590 aa18.43■□□□□ 0.54
COG4-202ENST00000393612 NCAPD3P42695 1498 aa18.42■□□□□ 0.54
COG4-202ENST00000393612 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
COG4-202ENST00000393612 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
COG4-202ENST00000393612 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
COG4-202ENST00000393612 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
COG4-202ENST00000393612 CLSPNQ9HAW4 1339 aa18.28■□□□□ 0.52
COG4-202ENST00000393612 PRKCSHP14314 528 aaPredicted RBP18.27■□□□□ 0.52
COG4-202ENST00000393612 CSRNP3Q8WYN3 585 aa18.27■□□□□ 0.51
COG4-202ENST00000393612 MIER1Q8N108 512 aa18.24■□□□□ 0.51
COG4-202ENST00000393612 CCDC88BA6NC98 1476 aa18.24■□□□□ 0.51
COG4-202ENST00000393612 TSHZ2Q9NRE2 1034 aa18.22■□□□□ 0.51
COG4-202ENST00000393612 SUPT16HQ9Y5B9 1047 aaKnown RBP18.19■□□□□ 0.5
COG4-202ENST00000393612 NESP48681 1621 aa18.16■□□□□ 0.5
COG4-202ENST00000393612 EHMT2Q96KQ7 1210 aa18.14■□□□□ 0.49
COG4-202ENST00000393612 CADPSQ9ULU8 1353 aa17.99■□□□□ 0.47
COG4-202ENST00000393612 ERICH6Q7L0X2 663 aa17.98■□□□□ 0.47
COG4-202ENST00000393612 CFTRP13569 1480 aa17.92■□□□□ 0.46
COG4-202ENST00000393612 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.45
COG4-202ENST00000393612 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
COG4-202ENST00000393612 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
COG4-202ENST00000393612 FANCD2Q9BXW9 1451 aa17.81■□□□□ 0.44
COG4-202ENST00000393612 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
COG4-202ENST00000393612 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
COG4-202ENST00000393612 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
COG4-202ENST00000393612 RBM19Q9Y4C8 960 aaKnown RBP17.76■□□□□ 0.43
COG4-202ENST00000393612 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
COG4-202ENST00000393612 APLP2Q06481 763 aa17.71■□□□□ 0.43
COG4-202ENST00000393612 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
COG4-202ENST00000393612 BCANQ96GW7 911 aa17.69■□□□□ 0.42
COG4-202ENST00000393612 CUX2O14529 1486 aa17.66■□□□□ 0.42
COG4-202ENST00000393612 URB2Q14146 1524 aaKnown RBP17.64■□□□□ 0.41
COG4-202ENST00000393612 CEP162Q5TB80 1403 aa17.64■□□□□ 0.41
COG4-202ENST00000393612 MSH5O43196 834 aa17.62■□□□□ 0.41
COG4-202ENST00000393612 FKBP8Q14318 412 aa17.61■□□□□ 0.41
COG4-202ENST00000393612 CUX1P39880 1505 aa17.6■□□□□ 0.41
COG4-202ENST00000393612 MYT1LQ9UL68 1186 aa17.59■□□□□ 0.41
COG4-202ENST00000393612 SYNJ1O43426 1573 aa17.59■□□□□ 0.41
COG4-202ENST00000393612 THOC2Q8NI27 1593 aaKnown RBP17.58■□□□□ 0.41
COG4-202ENST00000393612 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
COG4-202ENST00000393612 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
COG4-202ENST00000393612 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
COG4-202ENST00000393612 RAD54L2Q9Y4B4 1467 aa17.51■□□□□ 0.39
COG4-202ENST00000393612 FANCIQ9NVI1 1328 aa17.51■□□□□ 0.39
COG4-202ENST00000393612 NEFLP07196 543 aa17.5■□□□□ 0.39
COG4-202ENST00000393612 ANO8Q9HCE9 1232 aaPredicted RBP17.49■□□□□ 0.39
COG4-202ENST00000393612 TNIKQ9UKE5 1360 aa17.48■□□□□ 0.39
COG4-202ENST00000393612 FGD5Q6ZNL6 1462 aa17.48■□□□□ 0.39
COG4-202ENST00000393612 WDR62O43379 1518 aa17.47■□□□□ 0.39
COG4-202ENST00000393612 DNMBPQ6XZF7 1577 aa17.47■□□□□ 0.39
COG4-202ENST00000393612 DEKP35659 375 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms