RNA–Protein interactions for RNA: ENST00000389798.7

LRCH1-203, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRCH1, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-203ENST00000389798 TNIKQ9UKE5 1360 aa19.1■□□□□ 0.65
LRCH1-203ENST00000389798 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
LRCH1-203ENST00000389798 CLIP1P30622 1438 aa19.09■□□□□ 0.65
LRCH1-203ENST00000389798 SYNJ1O43426 1573 aa19.08■□□□□ 0.64
LRCH1-203ENST00000389798 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
LRCH1-203ENST00000389798 ARID3CA6NKF2 412 aa19.06■□□□□ 0.64
LRCH1-203ENST00000389798 SYNJ2O15056 1496 aa19.06■□□□□ 0.64
LRCH1-203ENST00000389798 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
LRCH1-203ENST00000389798 FAM69CQ0P6D2 419 aa19.06■□□□□ 0.64
LRCH1-203ENST00000389798 KCNH8Q96L42 1107 aa19.03■□□□□ 0.64
LRCH1-203ENST00000389798 RAPGEF2Q9Y4G8 1499 aa18.99■□□□□ 0.63
LRCH1-203ENST00000389798 CUX1P39880 1505 aa18.96■□□□□ 0.63
LRCH1-203ENST00000389798 CDK11AQ9UQ88 783 aaPredicted RBP18.96■□□□□ 0.63
LRCH1-203ENST00000389798 PTPRGP23470 1445 aa18.95■□□□□ 0.62
LRCH1-203ENST00000389798 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
LRCH1-203ENST00000389798 PRG4Q92954 1404 aaPredicted RBP18.93■□□□□ 0.62
LRCH1-203ENST00000389798 EIF4G3O43432 1585 aaKnown RBP18.91■□□□□ 0.62
LRCH1-203ENST00000389798 ABCA10Q8WWZ4 1543 aa18.91■□□□□ 0.62
LRCH1-203ENST00000389798 ARHGEF11O15085 1522 aa18.89■□□□□ 0.61
LRCH1-203ENST00000389798 ESF1Q9H501 851 aaKnown RBP18.88■□□□□ 0.61
LRCH1-203ENST00000389798 ARID4BQ4LE39 1312 aaPredicted RBP18.86■□□□□ 0.61
LRCH1-203ENST00000389798 FAM50AQ14320 339 aaKnown RBP18.85■□□□□ 0.61
LRCH1-203ENST00000389798 PLEKHD1A6NEE1 506 aa18.84■□□□□ 0.61
LRCH1-203ENST00000389798 GRIN2AQ12879 1464 aa18.83■□□□□ 0.61
LRCH1-203ENST00000389798 PLPPR3Q6T4P5 718 aa18.81■□□□□ 0.6
LRCH1-203ENST00000389798 CENPBP07199 599 aaPredicted RBP18.79■□□□□ 0.6
LRCH1-203ENST00000389798 IGF1RP08069 1367 aa18.78■□□□□ 0.6
LRCH1-203ENST00000389798 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
LRCH1-203ENST00000389798 KANK4Q5T7N3 995 aaPredicted RBP18.76■□□□□ 0.59
LRCH1-203ENST00000389798 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
LRCH1-203ENST00000389798 WDR97A6NE52 1622 aa18.73■□□□□ 0.59
LRCH1-203ENST00000389798 VPS8Q8N3P4 1428 aa18.73■□□□□ 0.59
LRCH1-203ENST00000389798 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
LRCH1-203ENST00000389798 KIAA0586Q9BVV6 1533 aa18.67■□□□□ 0.58
LRCH1-203ENST00000389798 TARBP1Q13395 1621 aaKnown RBP18.65■□□□□ 0.58
LRCH1-203ENST00000389798 RIMBP3CA6NJZ7 1639 aa18.64■□□□□ 0.57
LRCH1-203ENST00000389798 RIMBP3BA6NNM3 1639 aa18.64■□□□□ 0.57
LRCH1-203ENST00000389798 RIMBP3Q9UFD9 1639 aa18.64■□□□□ 0.57
LRCH1-203ENST00000389798 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
LRCH1-203ENST00000389798 GTF3C3Q9Y5Q9 886 aa18.61■□□□□ 0.57
LRCH1-203ENST00000389798 KIF21BO75037 1637 aa18.61■□□□□ 0.57
LRCH1-203ENST00000389798 BCL11AQ9H165 835 aa18.6■□□□□ 0.57
LRCH1-203ENST00000389798 ZNF777Q9ULD5 760 aaPredicted RBP18.59■□□□□ 0.57
LRCH1-203ENST00000389798 PRXQ9BXM0 1461 aa18.57■□□□□ 0.56
LRCH1-203ENST00000389798 CHD1O14646 1710 aa18.56■□□□□ 0.56
LRCH1-203ENST00000389798 NUP160Q12769 1436 aa18.56■□□□□ 0.56
LRCH1-203ENST00000389798 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
LRCH1-203ENST00000389798 ERICH6Q7L0X2 663 aa18.55■□□□□ 0.56
LRCH1-203ENST00000389798 NEUROD1Q13562 356 aa18.55■□□□□ 0.56
LRCH1-203ENST00000389798 FHOD3Q2V2M9 1422 aa18.53■□□□□ 0.56
LRCH1-203ENST00000389798 DIEXFQ68CQ4 756 aaKnown RBP18.53■□□□□ 0.56
LRCH1-203ENST00000389798 BIVM-ERCC5R4GMW8 1640 aa18.52■□□□□ 0.56
LRCH1-203ENST00000389798 UACAQ9BZF9 1416 aa18.51■□□□□ 0.55
LRCH1-203ENST00000389798 ADAMTS12P58397 1594 aa18.49■□□□□ 0.55
LRCH1-203ENST00000389798 MLECQ14165 292 aa18.48■□□□□ 0.55
LRCH1-203ENST00000389798 PLB1Q6P1J6 1458 aa18.47■□□□□ 0.55
LRCH1-203ENST00000389798 MTUS2Q5JR59 1369 aa18.47■□□□□ 0.55
LRCH1-203ENST00000389798 CHIC2Q9UKJ5 165 aa18.45■□□□□ 0.54
LRCH1-203ENST00000389798 ACIN1Q9UKV3 1341 aaKnown RBP18.45■□□□□ 0.54
LRCH1-203ENST00000389798 CEP170Q5SW79 1584 aa18.45■□□□□ 0.54
LRCH1-203ENST00000389798 EFCAB2Q5VUJ9 269 aa18.44■□□□□ 0.54
LRCH1-203ENST00000389798 ARHGAP35Q9NRY4 1499 aa18.43■□□□□ 0.54
LRCH1-203ENST00000389798 PBRM1Q86U86 1689 aa18.42■□□□□ 0.54
LRCH1-203ENST00000389798 CUL7Q14999 1698 aa18.41■□□□□ 0.54
LRCH1-203ENST00000389798 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
LRCH1-203ENST00000389798 TRIM52Q96A61 297 aa18.39■□□□□ 0.54
LRCH1-203ENST00000389798 PRKCSHP14314 528 aaPredicted RBP18.38■□□□□ 0.53
LRCH1-203ENST00000389798 CCNB3Q8WWL7 1395 aa18.38■□□□□ 0.53
LRCH1-203ENST00000389798 ZNF316A6NFI3 1004 aaPredicted RBP18.37■□□□□ 0.53
LRCH1-203ENST00000389798 IQGAP2Q13576 1575 aa18.37■□□□□ 0.53
LRCH1-203ENST00000389798 TEX14Q8IWB6 1497 aa18.36■□□□□ 0.53
LRCH1-203ENST00000389798 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.53
LRCH1-203ENST00000389798 ASXL2Q76L83 1435 aa18.33■□□□□ 0.53
LRCH1-203ENST00000389798 CD109Q6YHK3 1445 aa18.33■□□□□ 0.52
LRCH1-203ENST00000389798 RRP7BPQ9NSQ0 103 aa18.3■□□□□ 0.52
LRCH1-203ENST00000389798 FMN1Q68DA7 1419 aa18.29■□□□□ 0.52
LRCH1-203ENST00000389798 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
LRCH1-203ENST00000389798 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
LRCH1-203ENST00000389798 CFDP1Q9UEE9 299 aaPredicted RBP18.28■□□□□ 0.52
LRCH1-203ENST00000389798 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
LRCH1-203ENST00000389798 SIN3AQ96ST3 1273 aa18.24■□□□□ 0.51
LRCH1-203ENST00000389798 HIRIP3Q9BW71 556 aaPredicted RBP18.22■□□□□ 0.51
LRCH1-203ENST00000389798 POGZQ7Z3K3 1410 aa18.22■□□□□ 0.51
LRCH1-203ENST00000389798 STAG3Q9UJ98 1225 aa18.21■□□□□ 0.51
LRCH1-203ENST00000389798 PHLDB1Q86UU1 1377 aa18.2■□□□□ 0.5
LRCH1-203ENST00000389798 ABCC10Q5T3U5 1492 aa18.2■□□□□ 0.5
LRCH1-203ENST00000389798 BCANQ96GW7 911 aa18.2■□□□□ 0.5
LRCH1-203ENST00000389798 RAPGEF3O95398 923 aa18.18■□□□□ 0.5
LRCH1-203ENST00000389798 RAB3GAP2Q9H2M9 1393 aa18.17■□□□□ 0.5
LRCH1-203ENST00000389798 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
LRCH1-203ENST00000389798 ERCC6L2Q5T890 1561 aa18.14■□□□□ 0.49
LRCH1-203ENST00000389798 WDR7Q9Y4E6 1490 aa18.13■□□□□ 0.49
LRCH1-203ENST00000389798 LRRC9Q6ZRR7 1453 aa18.13■□□□□ 0.49
LRCH1-203ENST00000389798 POLR3GLQ9BT43 218 aa18.1■□□□□ 0.49
LRCH1-203ENST00000389798 ZNF326Q5BKZ1 582 aaKnown RBP18.1■□□□□ 0.49
LRCH1-203ENST00000389798 DHX57Q6P158 1386 aaKnown RBP18.1■□□□□ 0.49
LRCH1-203ENST00000389798 GGT6Q6P531 493 aa18.09■□□□□ 0.49
LRCH1-203ENST00000389798 MIER1Q8N108 512 aa18.09■□□□□ 0.49
LRCH1-203ENST00000389798 SPAG9O60271 1321 aaKnown RBP18.08■□□□□ 0.48
LRCH1-203ENST00000389798 PCF11O94913 1555 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms