RNA–Protein interactions for RNA: ENST00000389798.7

LRCH1-203, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRCH1, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-203ENST00000389798 NISCHQ9Y2I1 1504 aa26.31■■□□□ 1.8
LRCH1-203ENST00000389798 DCAF8L2P0C7V8 631 aa24.14■■□□□ 1.45
LRCH1-203ENST00000389798 ABCC9O60706 1549 aa23.79■■□□□ 1.4
LRCH1-203ENST00000389798 CCDC180Q9P1Z9 1646 aa23.03■■□□□ 1.28
LRCH1-203ENST00000389798 SHROOM4Q9ULL8 1493 aa22.88■■□□□ 1.25
LRCH1-203ENST00000389798 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
LRCH1-203ENST00000389798 RB1CC1Q8TDY2 1594 aa22.45■■□□□ 1.18
LRCH1-203ENST00000389798 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.18
LRCH1-203ENST00000389798 NACADO15069 1562 aa22.2■■□□□ 1.15
LRCH1-203ENST00000389798 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
LRCH1-203ENST00000389798 SCRIBQ14160 1630 aa21.65■■□□□ 1.06
LRCH1-203ENST00000389798 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
LRCH1-203ENST00000389798 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
LRCH1-203ENST00000389798 DCAF1Q9Y4B6 1507 aa21.44■■□□□ 1.02
LRCH1-203ENST00000389798 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
LRCH1-203ENST00000389798 EHMT2Q96KQ7 1210 aa21.07■□□□□ 0.96
LRCH1-203ENST00000389798 ERCC6Q03468 1493 aa21.03■□□□□ 0.96
LRCH1-203ENST00000389798 EIF4G1Q04637 1599 aaKnown RBP20.93■□□□□ 0.94
LRCH1-203ENST00000389798 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
LRCH1-203ENST00000389798 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
LRCH1-203ENST00000389798 CC2D2AQ9P2K1 1620 aa20.89■□□□□ 0.93
LRCH1-203ENST00000389798 FAM9AQ8IZU1 332 aaPredicted RBP20.89■□□□□ 0.93
LRCH1-203ENST00000389798 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
LRCH1-203ENST00000389798 PELP1Q8IZL8 1130 aaKnown RBP20.71■□□□□ 0.91
LRCH1-203ENST00000389798 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
LRCH1-203ENST00000389798 UNC13AQ9UPW8 1703 aa20.66■□□□□ 0.9
LRCH1-203ENST00000389798 SMARCA2P51531 1590 aa20.66■□□□□ 0.9
LRCH1-203ENST00000389798 LOC105371045A0A1W2PR82 267 aa20.63■□□□□ 0.89
LRCH1-203ENST00000389798 BAZ1AQ9NRL2 1556 aaPredicted RBP20.61■□□□□ 0.89
LRCH1-203ENST00000389798 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
LRCH1-203ENST00000389798 ATAD2BQ9ULI0 1458 aa20.53■□□□□ 0.88
LRCH1-203ENST00000389798 NCAPD3P42695 1498 aa20.52■□□□□ 0.87
LRCH1-203ENST00000389798 RSF1Q96T23 1441 aaPredicted RBP20.5■□□□□ 0.87
LRCH1-203ENST00000389798 FBLN2P98095 1184 aa20.45■□□□□ 0.86
LRCH1-203ENST00000389798 PCGF6Q9BYE7 350 aa20.36■□□□□ 0.85
LRCH1-203ENST00000389798 MYT1Q01538 1121 aa20.31■□□□□ 0.84
LRCH1-203ENST00000389798 CADPSQ9ULU8 1353 aa20.31■□□□□ 0.84
LRCH1-203ENST00000389798 SMARCA4P51532 1647 aa20.3■□□□□ 0.84
LRCH1-203ENST00000389798 MROH2BQ7Z745 1585 aa20.24■□□□□ 0.83
LRCH1-203ENST00000389798 TTBK1Q5TCY1 1321 aaPredicted RBP20.21■□□□□ 0.83
LRCH1-203ENST00000389798 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
LRCH1-203ENST00000389798 PPARGC1BQ86YN6 1023 aaKnown RBP20.16■□□□□ 0.82
LRCH1-203ENST00000389798 RANGAP1P46060 587 aaPredicted RBP20.14■□□□□ 0.81
LRCH1-203ENST00000389798 DNAJC5Q9H3Z4 198 aa20.14■□□□□ 0.81
LRCH1-203ENST00000389798 OSCARQ8IYS5 282 aa20.13■□□□□ 0.81
LRCH1-203ENST00000389798 CUX2O14529 1486 aa20.13■□□□□ 0.81
LRCH1-203ENST00000389798 CEP164Q9UPV0 1460 aa20.11■□□□□ 0.81
LRCH1-203ENST00000389798 NESP48681 1621 aa20.11■□□□□ 0.81
LRCH1-203ENST00000389798 WIZO95785 1651 aa20.07■□□□□ 0.8
LRCH1-203ENST00000389798 CHMP7Q8WUX9 453 aaPredicted RBP20.06■□□□□ 0.8
LRCH1-203ENST00000389798 UBTFP17480 764 aaKnown RBP20■□□□□ 0.79
LRCH1-203ENST00000389798 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
LRCH1-203ENST00000389798 TRHP20396 242 aaPredicted RBP19.97■□□□□ 0.79
LRCH1-203ENST00000389798 MRC2Q9UBG0 1479 aa19.96■□□□□ 0.79
LRCH1-203ENST00000389798 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
LRCH1-203ENST00000389798 NPM1P06748 294 aaKnown RBP eCLIP19.85■□□□□ 0.77
LRCH1-203ENST00000389798 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
LRCH1-203ENST00000389798 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
LRCH1-203ENST00000389798 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
LRCH1-203ENST00000389798 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
LRCH1-203ENST00000389798 CFTRP13569 1480 aa19.72■□□□□ 0.75
LRCH1-203ENST00000389798 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
LRCH1-203ENST00000389798 TRIM26Q12899 539 aaPredicted RBP19.72■□□□□ 0.75
LRCH1-203ENST00000389798 SOGA1O94964 1423 aa19.68■□□□□ 0.74
LRCH1-203ENST00000389798 TDRD9Q8NDG6 1382 aaKnown RBP19.64■□□□□ 0.73
LRCH1-203ENST00000389798 CSRNP3Q8WYN3 585 aa19.62■□□□□ 0.73
LRCH1-203ENST00000389798 IFT140Q96RY7 1462 aa19.61■□□□□ 0.73
LRCH1-203ENST00000389798 APLP2Q06481 763 aa19.61■□□□□ 0.73
LRCH1-203ENST00000389798 HRCP23327 699 aa19.57■□□□□ 0.72
LRCH1-203ENST00000389798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.53■□□□□ 0.72
LRCH1-203ENST00000389798 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
LRCH1-203ENST00000389798 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
LRCH1-203ENST00000389798 AEBP2Q6ZN18 517 aaPredicted RBP19.5■□□□□ 0.71
LRCH1-203ENST00000389798 ATP1B4Q9UN42 357 aaPredicted RBP19.47■□□□□ 0.71
LRCH1-203ENST00000389798 AQRO60306 1485 aaKnown RBP eCLIP19.44■□□□□ 0.73e-6■■■■□ 24.7
LRCH1-203ENST00000389798 TOPBP1Q92547 1522 aa19.42■□□□□ 0.7
LRCH1-203ENST00000389798 CCER1Q8TC90 406 aaPredicted RBP19.4■□□□□ 0.7
LRCH1-203ENST00000389798 WDR62O43379 1518 aa19.38■□□□□ 0.69
LRCH1-203ENST00000389798 URB2Q14146 1524 aaKnown RBP19.37■□□□□ 0.69
LRCH1-203ENST00000389798 RUSC2Q8N2Y8 1516 aa19.36■□□□□ 0.69
LRCH1-203ENST00000389798 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
LRCH1-203ENST00000389798 RAD54L2Q9Y4B4 1467 aa19.32■□□□□ 0.68
LRCH1-203ENST00000389798 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
LRCH1-203ENST00000389798 GRIN2BQ13224 1484 aa19.3■□□□□ 0.68
LRCH1-203ENST00000389798 DNMBPQ6XZF7 1577 aa19.29■□□□□ 0.68
LRCH1-203ENST00000389798 MYT1LQ9UL68 1186 aa19.27■□□□□ 0.68
LRCH1-203ENST00000389798 GAPVD1Q14C86 1478 aa19.27■□□□□ 0.68
LRCH1-203ENST00000389798 THOC2Q8NI27 1593 aaKnown RBP19.27■□□□□ 0.67
LRCH1-203ENST00000389798 KIF27Q86VH2 1401 aa19.25■□□□□ 0.67
LRCH1-203ENST00000389798 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
LRCH1-203ENST00000389798 POLA1P09884 1462 aaPredicted RBP19.24■□□□□ 0.67
LRCH1-203ENST00000389798 ZNF608Q9ULD9 1512 aaPredicted RBP19.23■□□□□ 0.67
LRCH1-203ENST00000389798 JPH4Q96JJ6 628 aa19.22■□□□□ 0.67
LRCH1-203ENST00000389798 P3H3Q8IVL6 736 aa19.21■□□□□ 0.67
LRCH1-203ENST00000389798 ITGAEP38570 1179 aa19.2■□□□□ 0.66
LRCH1-203ENST00000389798 SNAPC4Q5SXM2 1469 aa19.18■□□□□ 0.66
LRCH1-203ENST00000389798 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
LRCH1-203ENST00000389798 EEA1Q15075 1411 aa19.12■□□□□ 0.65
LRCH1-203ENST00000389798 CARMIL2Q6F5E8 1435 aa19.12■□□□□ 0.65
LRCH1-203ENST00000389798 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms